prot_C-linearis_contig112.1527.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1527.1
Unique Nameprot_C-linearis_contig112.1527.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length831
Homology
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: D8LD11_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD11_ECTSI)

HSP 1 Score: 662 bits (1708), Expect = 3.230e-226
Identity = 460/744 (61.83%), Postives = 516/744 (69.35%), Query Frame = 0
Query:  111 AMSAQADNPLPLQQXXXXQVILDLPQSPTQRQKAFSSTVVGFVKAGDGESALQLYGKAAEVGCKISENIFNAVLSVCEGDKVSQGMGVLSDMIAAGIKPRENHYAFLLREAAGRGAFEEVFSQVQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEHVDMMKGWAAAGELRQRVADGSVEAFLGQLGDTAFELGSSREASRGEMSGAGGEEDDSRSGKAG-----FLETLLAAFNSDSNSSSRNGDVQAYYSSSAVPIAGVSSASPEMGGVCDCCGATLKVVGLDPPAQARVRSALIRLGAETAYSMPPPPPTQPRTR---QSSRLDSAFAGGEDHAGKKQRCEQRQAGGAMGNLEQFAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARSRRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGN-GPHVNGHGDGDGNSSAKD-------DGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDGGARLTVVSNDEMRNHRMALLEPVQFKRWRNSQVRGFHFPLDSPAEEPSGSSVSATSSTSGKGGSERDI------RSPTPTLDSPPQPPIVLPAPTFTRDMQVL-KRAWHIPIRGQQDGEPSTKWLCLNLASLVDEDGGGQP-EVRPSEIRPRRKYRS 830
            A++ +++   PL Q    Q++LDLPQSP +RQKAFS+ VV  VKAGD + AL LYGKAAEVGC ISE +FNAVLSV      S G+ VLSDM+ AGIKPRENHYAFLLREAA RGAFEE FSQV+EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PEEH+DM+KGWAAAGELR RVADGSVE  L QL    FEL   R+A      GA    DD  SG +       L+TLL+AFN+DSN  S   DVQ Y+SS    +A VSSAS   GGVCDCCGA LKVVGLDP A+ARVRSAL++L +ETAY  P             QSSRLD A+AG  +  G+  R   R  G AMG+LE+FAAWLEERRREGV FTTVVDGCNVAYYGQNKEGGKF+ISQVDL+A+QLE +GERVLV+LPERYLRPCVPNSARSRR KNP SALSDEDL TI+ WR+R+M+YSCANG DDDLFWMYFTVSSDA+    A EG E + +G+G  G   N  G    NS+  D       +   R G  GG       GG G G  +            S G     RLTVVSNDEMRNHRMALLEPV FKRWR SQVRGFHFP   P +   GSS S+T                   R   P   S P  PIV P+P FTRDMQVL K AWHIPI   QDGEP TKWLC+NLA+LV+E+  GQ  E RPSE+ PRRKYRS
Sbjct:    5 ALAQRSEPSAPLSQQ---QLVLDLPQSPRKRQKAFSTMVVNSVKAGDADRALLLYGKAAEVGCMISETVFNAVLSV------SNGVRVLSDMVEAGIKPRENHYAFLLREAASRGAFEEAFSQVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPEEHIDMIKGWAAAGELRPRVADGSVERCLQQLAGMDFELIPCRDA------GAAASCDDHVSGSSAGSGDHHLQTLLSAFNADSNFVSSESDVQTYFSSP-PRVASVSSASLASGGVCDCCGAALKVVGLDPEARARVRSALVKLASETAYPTPXXXXXXXXXXXXXQSSRLDYAYAG--EGQGEMDR---RGLGEAMGDLERFAAWLEERRREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERDGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDRWRRRQMLYSCANGTDDDLFWMYFTVSSDAT----AIEGEEEVTNGDGGAGLRENRQGYKPSNSNGVDGIYVGRQEATPRGGFAGGDDDETRLGGTGEGVGQXXXXXXXXXXXXSSGDGLAGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPNDGSRGSSASSTXXXXXXXXXXXXXXXXXXXRHRPPEQGSSPPLPIVCPSPAFTRDMQVLNKHAWHIPIGEGQDGEPGTKWLCINLAALVEEEEDGQTAEQRPSEVIPRRKYRS 723          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: L1IRC9_GUITC (PRORP domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IRC9_GUITC)

HSP 1 Score: 105 bits (261), Expect = 2.500e-21
Identity = 98/356 (27.53%), Postives = 142/356 (39.89%), Query Frame = 0
Query:  477 FAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARSRRRKNPPSA---LSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDGGARLTVVSNDEMRNHRMALLEPVQFKRWRNSQVRGFHFPLDSPAEEPSGSSVSATSSTSGKGGSERDIRSPTPTLDSPPQPPIVLPAPTFTRDMQVLKRAWHIPIRG------QQDGE----------PST---------KWLCLNLA 804
            F  W+ E  +   QF+ VVDG NVAY  QN E G F   Q+D++  +L EEGE+VLV+LP +Y++P +PN AR +   N  +A   ++ +++  I+ W     +    +G++DD +WM  TV                                                                                   +D G  + VV+ND+MR+HR+ALL+P  F RW+ +++  F F   S A EP     + TS          DI  P  TL    QPP++  +P   R        WH PIR       ++DG+           ST         KWLCL LA
Sbjct:   17 FLDWMRETSQ---QFSVVVDGPNVAYSKQNFETGCFSYHQIDIVVNKLREEGEKVLVLLPYKYVQPIIPNHARHQGHLNFSTAQHVVTGDEMEIIDRWNAEGCLKISPHGSNDDWYWMLSTV-----------------------------------------------------------------------------------IDEGETVRVVTNDQMRDHRLALLDPRPFLRWKTTRIIRFDF---SHAWEPE-KIANGTS----------DI--PQVTLI---QPPVI--SPEIQRSSDEEHMIWHFPIRTKVQEDEEEDGDCEFNPTEAACASTTLVRKTEEGKWLCLKLA 265          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: A0A835ZAC6_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.460e-18
Identity = 75/236 (31.78%), Postives = 104/236 (44.07%), Query Frame = 0
Query:  486 REGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARSRRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDG-GARLTVVSNDEMRNHRMALLEPVQFKRWRNSQVRGFHFP 720
            RE  +FT VVD  NVAY+ QN  GG FQ++QVD + ++LE  GERVLVV PERYLR  +PNS R  R +   + LS + L  I  W ++ ++Y         + +      S     AG                           ++  DD +                      W             ++  D   A +TVVSND MR+HR+ALLEP  F RW+ +Q   ++FP
Sbjct:  315 RERAKFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYR-------QVRYQLVLCCSYVPTLAGRCA------------------------NTDNDDWY----------------------WMYL----------TVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYFP 487          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: A0A7S0WPL4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WPL4_9CHLO)

HSP 1 Score: 90.9 bits (224), Expect = 9.690e-16
Identity = 96/356 (26.97%), Postives = 144/356 (40.45%), Query Frame = 0
Query:  473 NLEQFAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEE----GERVLVVLPERYLRPCVPNSARSRRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDGGARLTVVSNDEMRNHRMALLEPVQFKRWRNSQVRGFHF--PLDSPAEEPSG--SSVSATSSTSGKGGSERDIRSPTPTLDSPPQPPIVLPAP-TFTRDMQVLKR-AWHIPIRGQQD---------------GEPSTKWLCLNL 803
            +L +F   ++ R ++G     +VDG NVAY  QN  GG F   Q+D L   L EE     + +L++LP++YLR  +PN   S++  N    +    +  I  WR+R ++ +   GADDD   +   V+   S G                    N H            G DRR                   W +R                      V+ND +R+HR+A+L+P  F R+R SQ+  ++    L+  A   +G  S    TS T+G       I        S P P + L AP TF+R+MQ  +   WH+PI   +D               GE   +WL ++L
Sbjct:   13 SLVRFEEAMQHRFQKGPPLRFIVDGANVAYMNQNFVGGGFNYDQIDQLVTHLAEEYCASWQEILLLLPQKYLRKVIPNH--SKKGHNRKMKVEQRHIDMIASWRKRGILQAVPLGADDDWXXLTCCVADWGSRG------------------RTNTH------KKIFGQGFDRR-------------------WFERP-------------------ICVTNDTIRDHRLAILQPKAFDRFRASQLMRYNIVGQLEPVAGHATGDPSPGGDTSETTGTADGAEAI-------PSQPLPKVELFAPPTFSREMQRTRADTWHVPIGTPEDLPPERLLPGGQSPAGGEADDQWLVISL 297          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: A0A7S4QEE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEE3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.740e-11
Identity = 66/241 (27.39%), Postives = 101/241 (41.91%), Query Frame = 0
Query:  474 LEQFAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARSRRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDGGARLTVVSNDEMRNHRMALLEPVQFKRWRNSQV 714
            L  F  W+  R  EG  FT +VDG NVAY+GQ    G     Q+ L+ + LE   E  LV++P++Y       S++  ++      L+ EDL  IEG+ ++  ++       DD +WM  +VS D +V                NG +++   D D                                    DGR             G R  ++SND+MR+H++ LLEP  F+RW +S +
Sbjct:   49 LSNFVDWVNTR--EGEPFTAIVDGANVAYFGQ----GHVDYLQLKLMVETLENMNENPLVIMPQKYTNSKFRVSSKFLQK------LTPEDLEIIEGFEEKGQLFKVPALCLDDYYWMLASVS-DQTVSR--------------NGTNIDVPTDND------------------------------------DGRWP-----------GIRPMLISNDQMRDHKLELLEPRLFRRWCSSHI 215          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: A0A7S0CK07_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK07_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.080e-10
Identity = 81/339 (23.89%), Postives = 137/339 (40.41%), Query Frame = 0
Query:  393 VCDCCGATLKVVGLDPPAQARVRSALIRLGAETAYSMPPPPPTQPRT--RQSSRLDSAFAGGEDHAGKKQRCE-------QRQAGGAMGNLEQFAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERY-LRPCVPNSARSRRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDG--GARLTVVSNDEMRNHRMALLEPVQFKRWRNSQVRGFHF 719
            +C      L ++ LD   + ++   L+RL               P+T  ++SS + S     E+   KKQ+ +        R +  A   L  FA WL  R+ E   FT +VDG NVAY GQN E G+F   Q+  L   L   GE  LV++P +Y ++    N+   +RR+     L+D +   +  +R    +Y       DD +WM  +VS           GG+ ++       HV+                                          +G     + ++I  +   G R  +++ND+MR+H++ LL+   F+RW +  +  ++F
Sbjct:  155 LCPRSNTALHLIVLDSNQRQQLHQDLVRLAGIQYMEWGSSSKASPKTDEKKSSGITSPNTRHENKRDKKQQPKLSADEKNNRDSKRAEYELSTFADWLNVRKGE--PFTAIVDGANVAYSGQNFEQGRFNYHQIKFLTDALISMGENPLVIVPYKYTMKTFHTNNGAQKRRQ----ILNDVEQDILFDFRDDGRLYRVPARCLDDYYWMLASVSDQLKP-----TGGKGVDM-----LHVS---------------------------------------PNIEGNETDKSSNNINTERFPGTRPMLITNDQMRDHKLELLDTRLFRRWTSCHIVNYNF 438          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: K0SEE8_THAOC (RNase NYN domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEE8_THAOC)

HSP 1 Score: 75.1 bits (183), Expect = 4.550e-10
Identity = 64/250 (25.60%), Postives = 99/250 (39.60%), Query Frame = 0
Query:  470 AMGNLEQFAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARSRRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDGGARLTVVSNDEMRNHRMALLEPVQFKRWRNSQVRGFHF 719
            A   L  F+ WL   RR G  FT ++DG NV YY Q+ + G+F   Q++ + + L + GE  LVV+P +Y R    +S    +R      L  E++  +    +   +Y       DD +WM  +VS  +S  +   E G +                            D   + G  PRG                              G R  +V+ND+MR+H++ LLEP  F+RW    +  + F
Sbjct:  550 ARDELRSFSDWLA--RRTGRPFTAIIDGANVGYYMQSFDKGRFNYHQINYMVETLIDRGENPLVVVPGKYGRERFHSSHGQVQR------LDREEVAIMNRLAEEGRMYRVPPRCLDDFYWMLASVSDQSSSSSRGPEDGPS----------------------------DLSFVPGDDPRGRF---------------------------PGTRPMLVTNDQMRDHKLELLEPRLFRRWYGCHIVNYSF 736          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: A0A7S2EEA5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EEA5_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.380e-10
Identity = 66/241 (27.39%), Postives = 100/241 (41.49%), Query Frame = 0
Query:  474 LEQFAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARSRRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDGGARLTVVSNDEMRNHRMALLEPVQFKRWRNSQV 714
            L  F  W+  R  EG  FT +VDG NVAY+GQ    G     Q+ L+ + LE   E  LV++P++Y       S++  ++      L+ EDL  IEG+  +  ++       DD +WM  +VS D +V                NG +++   D D                                    DGR             G R  ++SND+MR+H++ LLEP  F+RW +S +
Sbjct:  477 LSNFVDWVNTR--EGEPFTAIVDGANVAYFGQ----GHVDYLQLKLMVETLENMNENPLVIMPQKYTNSKFRVSSKFLQK------LTPEDLEIIEGFEAKGQLFKVPALCLDDYYWMLASVS-DQTVSR--------------NGTNIDVPTDND------------------------------------DGRWP-----------GIRPMLISNDQMRDHKLELLEPRLFRRWCSSHI 643          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: A0A813CPS8_9DINO (Metalloendopeptidase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CPS8_9DINO)

HSP 1 Score: 73.6 bits (179), Expect = 1.620e-9
Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 0
Query:  474 LEQFAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARSRRRK-----NPPSAL--SDEDLRTIE---GWRQREMVYSCANGA----DDDLFWMYFTVSS 597
             ++F  WLEE+      F  V+DG NV +  QN+EGG FQ SQ+D + K+L E G RVL+VL  ++LR     +   R+++     N  S L  SDE     E   G  Q + V+   +G      DD +W++  +SS
Sbjct:  782 FKRFKKWLEEQP----PFDIVIDGANVGFNNQNREGGLFQYSQIDAVIKKLRETGSRVLLVLHPKWLRADADRTVTKRKKRKLDQINLESGLGSSDESAEEHEDESGMLQLDAVHKSDSGERVWEGDDWYWLFAALSS 915          
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Match: B7G3U7_PHATC (Ribonuclease P n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3U7_PHATC)

HSP 1 Score: 70.9 bits (172), Expect = 7.400e-9
Identity = 79/341 (23.17%), Postives = 126/341 (36.95%), Query Frame = 0
Query:  470 AMGNLEQFAAWLEERRREGVQFTTVVDGCNVAYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARSRRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDASVGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPRGAAGGGNGGGAWEQRDGRVEPDTRSSIGVDGGARLTVVSNDEMRNHRMALLEPVQFKRWRNSQVRGFHFPLDSPAEEPSGSSVSATSSTSGKGGSERDIRSPTPTLDSPPQPPIVLPAPTFTRDMQVLK-------RAWHIPIRGQQDGEPSTKWLCLNL 803
            A  NL +F+ WL E   EG  FT +VDG NVAY G     G    SQV L+  +LE+ GE+VLVV+P +Y+      +       +    LS+ ++  + G      +Y       DD +WM  +V++                                         H     I                 + R  R             G R  +V+ND+MR+H++ALLE   F+RW +  +   ++ L+S +E                   +RD+R               +P   F+R++Q  +         WH P+ G +  +     LC+N+
Sbjct:  460 ARRNLFEFSEWLREH--EGEPFTAIVDGANVAYAGH----GNVHYSQVQLVVDKLEDMGEKVLVVMPSKYVGEKFYVAG-----IDSVQQLSEREVGIMNGLLDEGKMYQVPAACLDDYYWMLASVANQTE--------------------------------------HQLHVSI-----------------DNRQRRFP-----------GLRPMLVTNDQMRDHKLALLEKRLFRRWTSCHI--VNYDLESYSENE---------------WQDRDVR--------------FVPTDFFSREIQGNEVGGERSSTVWHYPVTGWEGSDR----LCINI 688          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LD11_ECTSI3.230e-22661.83PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
L1IRC9_GUITC2.500e-2127.53PRORP domain-containing protein n=1 Tax=Guillardia... [more]
A0A835ZAC6_9STRA5.460e-1831.78Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S0WPL4_9CHLO9.690e-1626.97Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S4QEE3_9STRA4.740e-1127.39Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S0CK07_9STRA1.080e-1023.89Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
K0SEE8_THAOC4.550e-1025.60RNase NYN domain-containing protein (Fragment) n=1... [more]
A0A7S2EEA5_9STRA8.380e-1027.39Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A813CPS8_9DINO1.620e-935.51Metalloendopeptidase n=1 Tax=Symbiodinium sp. KB8 ... [more]
B7G3U7_PHATC7.400e-923.17Ribonuclease P n=2 Tax=Phaeodactylum tricornutum T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11980coord: 454..602
e-value: 1.8E-29
score: 104.5
coord: 675..723
e-value: 2.0E-7
score: 32.6
NoneNo IPR availablePANTHERPTHR13547UNCHARACTERIZEDcoord: 76..802
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..830
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR031595Protein-only RNase P, C-terminalPFAMPF16953PRORPcoord: 473..597
e-value: 1.5E-7
score: 31.2
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 144..296
e-value: 9.4E-24
score: 84.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 142..410
e-value: 2.8E-28
score: 101.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 248..280
e-value: 0.0016
score: 16.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 141..175
score: 7.202
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..279
score: 9.854
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 7.322
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 176..209
score: 5.294
IPR033495Mitochondrial ribonuclease P catalytic subunitPANTHERPTHR13547:SF1MITOCHONDRIAL RIBONUCLEASE P CATALYTIC SUBUNITcoord: 76..802

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:263505..269897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1527.1mRNA_C-linearis_contig112.1527.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 262516..269949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1527.1 ID=prot_C-linearis_contig112.1527.1|Name=mRNA_C-linearis_contig112.1527.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=831bp
MRRDKRARGQSSRFGFCRSAAATGVVACLLLFSSSRVSISAFVGPRQLSS
GQQQKQQQKQPHHSSHRGVPSNFVGSSASTHSKPVWTFDHSKLLLSTSAV
TEVNNTSIRSAMSAQADNPLPLQQQQQQQVILDLPQSPTQRQKAFSSTVV
GFVKAGDGESALQLYGKAAEVGCKISENIFNAVLSVCEGDKVSQGMGVLS
DMIAAGIKPRENHYAFLLREAAGRGAFEEVFSQVQEMVEGGVQPRLRTYS
PLLKGLCNKPDMALAMEVWLHMKAQGVQPTPEEHVDMMKGWAAAGELRQR
VADGSVEAFLGQLGDTAFELGSSREASRGEMSGAGGEEDDSRSGKAGFLE
TLLAAFNSDSNSSSRNGDVQAYYSSSAVPIAGVSSASPEMGGVCDCCGAT
LKVVGLDPPAQARVRSALIRLGAETAYSMPPPPPTQPRTRQSSRLDSAFA
GGEDHAGKKQRCEQRQAGGAMGNLEQFAAWLEERRREGVQFTTVVDGCNV
AYYGQNKEGGKFQISQVDLLAKQLEEEGERVLVVLPERYLRPCVPNSARS
RRRKNPPSALSDEDLRTIEGWRQREMVYSCANGADDDLFWMYFTVSSDAS
VGAGAAEGGEAIESGEGNGPHVNGHGDGDGNSSAKDDGHDRRGLIGGAPR
GAAGGGNGGGAWEQRDGRVEPDTRSSIGVDGGARLTVVSNDEMRNHRMAL
LEPVQFKRWRNSQVRGFHFPLDSPAEEPSGSSVSATSSTSGKGGSERDIR
SPTPTLDSPPQPPIVLPAPTFTRDMQVLKRAWHIPIRGQQDGEPSTKWLC
LNLASLVDEDGGGQPEVRPSEIRPRRKYRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031595PRORP_C
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033495MRPP3