prot_C-linearis_contig112.1526.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1526.1
Unique Nameprot_C-linearis_contig112.1526.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length300
Homology
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Match: D8LD09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD09_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 7.140e-106
Identity = 163/230 (70.87%), Postives = 185/230 (80.43%), Query Frame = 0
Query:   68 VAEIELSSAVDLVHAHGQPLLEAVRQTGRFLYRGETLSPRGGG--GGSRAVVERPDLLDEETYESAVAAEYFRAADVAMEKGFGAFARPSNAHIMVSNKEAAAAWGTACSVWPLGDSLDYSWLDNCSEWWDPSWERPRGRSSSANGNREAFFWRDQDSLRKFLSDDLRVNSGLPEAIRRGHELLVRSGEFSLCSSNMSRGEEVVIRDAFVCIPASQDRAVRSALGVPLER 295
            V E+EL SA+ LV AHG+PLL+ VR++   LYRGE LS  GGG  GG RAV E+PDLLD ETY SAVAAEYFRAAD  M+K F A ARPSNAHIMVSNKEAAAAWGTACS+WPLGDSLDYSWL +C+E WDP WERP  RSS  NGNREAFFWRD+D +R+FL++ LR+NSGL EAIR  HE+LVRSGEFS   S   +G   VI+D FVCIPAS+DRAVRSALG+P ER
Sbjct:    2 VVELELPSALALVRAHGRPLLDIVRRSSGLLYRGEALSLGGGGKGGGPRAVTEKPDLLDAETYGSAVAAEYFRAADAIMDKDFQAPARPSNAHIMVSNKEAAAAWGTACSIWPLGDSLDYSWLHSCAELWDPRWERPGSRSSPPNGNREAFFWRDEDGMRRFLAEGLRINSGLSEAIRGRHEVLVRSGEFSF-GSEARKG--AVIQDTFVCIPASEDRAVRSALGIPAER 228          
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Match: A0A6H5KTS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS9_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 2.740e-66
Identity = 100/138 (72.46%), Postives = 115/138 (83.33%), Query Frame = 0
Query:  160 MVSNKEAAAAWGTACSVWPLGDSLDYSWLDNCSEWWDPSWERPRGRSSSANGNREAFFWRDQDSLRKFLSDDLRVNSGLPEAIRRGHELLVRSGEFSLCSSNMSRGEEVVIRDAFVCIPASQDRAVRSALGVPLERSR 297
            MVSNKEAAA WGTACS+WPLGDSLDYSWLD+C+E WDP WER   RSS  NGNREAFFWRD+D +R+FL++ LR+NSGLPEAIR GHE+LVRSGEFS  S   + G   V++ AFVCIPAS+DRAVRSALG+P ER R
Sbjct:    1 MVSNKEAAATWGTACSIWPLGDSLDYSWLDSCAELWDPRWERLGSRSSPPNGNREAFFWRDEDGMRRFLAEGLRINSGLPEAIRCGHEVLVRSGEFSFGSEERT-GRAAVVQGAFVCIPASEDRAVRSALGIPAERVR 137          
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Match: A0A835YZG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.980e-64
Identity = 123/266 (46.24%), Postives = 164/266 (61.65%), Query Frame = 0
Query:   32 AGPGAAADSNKIVGGADPAATHTAFADALLTLPGGGVAEIELSSAVDLVHAHGQPLLEAVRQTG-RFLYRGETLSPRGGGGGSRAV-VERPDLLDEETYESAVAAEYFRAADVAMEKGFGAFARPSNAHIMVSNKEAAAAWGTACSVWPLGDSLDYSWLDNCSEWWDPSWERPRGRSSSANGNREAFFWRDQDSLRKFLSDDLRVNSGLPEAIRRGHELLVRSGEFSLCSSNMSRGEEVVIRDAFVCIPASQDRAVRSALGVPLER 295
            AGP  AAD   ++G      + T+ A   LTL            AV L+ + GQP+L  V++ G +FLYRGETL    GG  S A+ V+ PDLLD  TY S  AAEYF A D  +EK F A ARPS AHI+V+N +AAA WG ACS+WP+G  L+++WL++  E WD  WE+P G  S  NGNR AFFWR++ +L ++L   + V+ GL EAIR GHE+L++SG          RG    + +A+V +PA  D A+R ALGVPL++
Sbjct:   27 AGPACAAD-QAVIGKVARLTSSTSEASVPLTL----------QEAVRLILSQGQPILNGVKEAGGQFLYRGETLPAERGGASSAALRVQPPDLLDTSTYGSKAAAEYFAALDAMLEKEFAAEARPSTAHIVVANAQAAAEWGEACSIWPVGSPLEWTWLEHTFELWDKGWEQPDGGGSLLNGNRGAFFWREEGALHEYLEAGVIVDKGLAEAIRSGHEILIQSGPLQ---PPYKRG----VANAYVAVPARLDDALRDALGVPLQQ 274          
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Match: W7TTV6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTV6_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.990e-23
Identity = 77/241 (31.95%), Postives = 117/241 (48.55%), Query Frame = 0
Query:   65 GGGVAEIELSS-----AVDLVHAHGQPLLEAVRQTGR---FLYRGETLSPRGGGGGSRAVVER--PDLLDEETY-ESAVAAEYFRAADVAMEKGFGAFARPSNAHIMVSNKEAAAAWGTACSVWPLGDSLDYSWLDNCSEWWDPSWERPRGRSSSANGNREAFFWRDQDSLRKFLSDDLRVNSGLPEAIRRGHELLVRSGEFSLCSSNMSRGEEVVIRDAFVCIPASQDRAVRSALGVPLE 294
            GGG+ + E  +     A + +  H Q +L A  +TG    FLYRGE ++        R  + +  PDL+D  TY E   AA +F   + AME   G   RPS  H+  S+  +AAAWGT CSVWPLG+ L Y+WL +   +W    E+   R  S             D +R  +  +++V+  L  A++ GHE+++ +GEF                  F+ +P + +R VR+ LG+  E
Sbjct:  118 GGGMPQFEAQAMSTGRAAEFIKQHCQGILRAYNETGATPVFLYRGENIN--------RPTLLKCPPDLMDVNTYQEGKEAAAFFAKMEEAME---GLPVRPSLGHLATSDMRSAAAWGTPCSVWPLGNELHYAWLRDAKAFWPVRAEK---RDISV------------DDIRACVKREIQVDQNLDMAVKMGHEVMLSTGEFG-----------------FLVVPVAYEREVRARLGLGYE 315          
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Match: A0A8J2SFP8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFP8_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.950e-16
Identity = 67/186 (36.02%), Postives = 87/186 (46.77%), Query Frame = 0
Query:   66 GGVAEIELSSAVDLVHAHGQP-LLEAVRQTGRFLYRGETLSPRGGGGGSRAVVERP-DLLDEETYESAVAAEYFRAADVAMEKGFGAFARPSNAHIMVSNKEAAAAWGTACSVWPLGDSLDYSWLDNCSEWWDPSWERPRGRSSSANGNREAFFWRDQDSLRKFLSDDLRVNSGLPEAIRRGHELL 249
            G V EI L  AV  +   G P  + AV Q G F+YRG   +       S  +   P DL    TY SA AA YFR+ D A++K      R   AH+ V+N EAAA WGTA S+WPLG S+ Y+W                             FW  +D     +++ LRV+ GL + IR G E+L
Sbjct:   37 GAVREISLGEAVKAIITDGNPDWVRAVVQAG-FIYRGVAEA-------SPTLRRDPYDLYSPATYNSARAATYFRSLDAALDKIKAPGPRARTAHLAVANAEAAAQWGTAASIWPLG-SISYAWGPTA-------------------------FWPTKDRAIT-VAESLRVDEGLADCIRDGREVL 187          
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Match: A0A7S2QZW8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZW8_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.410e-8
Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0
Query:   96 RFLYRG----ETLSPRGGGGGSRAVVERPDLLDEETYESAVAAEYFRAADVAMEKGFGAFA--RPSNAHIMVSNKEAAAAWGTACSVWPLGDSLDYSWLDNCSEWW 195
            +FLYRG    E   P           E  DLL+ ETY S  A  +F+  D    +G  A +  +PSN H+ V++  AA+ WGTA SVWPLGD ++++W  +   +W
Sbjct:   22 KFLYRGIPPLEASQPT-------LRSESSDLLNPETYGSKDATLFFKKLD----RGEMAKSPVKPSNGHLAVTSPGAASQWGTAASVWPLGDKVNFAWYQHGGSFW 116          
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Match: A0A7S2Q5H3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q5H3_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.900e-7
Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   97 FLYRGETLSPRGG------GGGSRAVVERP-DLLDEETYESAVAAEYFRAADVAMEKGFGAFARPSNAHIMVSNKEAAAAWGTACSVWPLGD-SLDYSWLDNCSEWW 195
            FLYRG  LSP               + + P DLLD ETY S  AA YF++ +V M     +  RPSN+H+  +    AA WGTA S+WPLG+  + ++W++    +W
Sbjct:  112 FLYRG--LSPDANKQLVTENSSGLVITDEPFDLLDVETYGSNAAATYFQSLEVQMNANRLSI-RPSNSHMGSTCPLEAAKWGTAVSIWPLGEHGVQFAWMEGGGLFW 215          
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Match: A0A7S3P3L3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3L3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.200e-5
Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 0
Query:   88 LEAVRQTGRFLYRGETLSPRGGGGGSRAVVERP-DLLDEETYESAVAAEYFRAADVAMEKGFGAFARPSNAHIMVSNKEAAAAWGTACSVWPLGDSLDYSW 187
            L AV+++G+FLYRGE++S          ++  P DLLD  TY +    E     +    K      RPSN HI  + ++ AA WG  CS+ PLG   ++ W
Sbjct:   46 LAAVQKSGKFLYRGESVS-------CPTILNPPYDLLDPVTYGNDT--EVLNFFNCLEHKYRDKPIRPSNGHIGTAKRQDAAFWGPPCSILPLGRPFNFMW 137          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LD09_ECTSI7.140e-10670.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTS9_9PHAE2.740e-6672.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YZG2_9STRA2.980e-6446.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TTV6_9STRA4.990e-2331.95Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8J2SFP8_9STRA8.950e-1636.02Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2QZW8_9STRA1.410e-837.74Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2Q5H3_9STRA1.900e-738.32Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3P3L3_9STRA1.200e-535.64Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:252713..256686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1526.1mRNA_C-linearis_contig112.1526.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 252713..256686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1526.1 ID=prot_C-linearis_contig112.1526.1|Name=mRNA_C-linearis_contig112.1526.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=300bp
MSPHHNVKCSNRGAWLTQQCAAALTLPAVLPAGPGAAADSNKIVGGADPA
ATHTAFADALLTLPGGGVAEIELSSAVDLVHAHGQPLLEAVRQTGRFLYR
GETLSPRGGGGGSRAVVERPDLLDEETYESAVAAEYFRAADVAMEKGFGA
FARPSNAHIMVSNKEAAAAWGTACSVWPLGDSLDYSWLDNCSEWWDPSWE
RPRGRSSSANGNREAFFWRDQDSLRKFLSDDLRVNSGLPEAIRRGHELLV
RSGEFSLCSSNMSRGEEVVIRDAFVCIPASQDRAVRSALGVPLERSRSQ*
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