prot_C-linearis_contig112.1508.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1508.1
Unique Nameprot_C-linearis_contig112.1508.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length59
Homology
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: A0A1E7F0G0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0G0_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.640e-19
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    6 SGVNRHSDKHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDIRR 58
            SG++RHSDKHA   IP+AQ AFK+LMIH +LQ A RIAFRCVLHRCG+ DI R
Sbjct:    2 SGIHRHSDKHATGKIPKAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 54          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: A0A524MI88_9PROT (Uncharacterized protein n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A524MI88_9PROT)

HSP 1 Score: 82.0 bits (201), Expect = 9.070e-19
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    5 ASGVNRHSDKHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDIRR 58
            +SGV+ HS +HA  HIPEAQ AFK+LMIH +LQ A RIAFRCVLHRCG+ DI R
Sbjct:   66 SSGVHEHSTRHATGHIPEAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 119          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: B8CEF4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEF4_THAPS)

HSP 1 Score: 79.0 bits (193), Expect = 5.160e-18
Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    6 SGVNRHSDKHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDI 56
            SGV+ HSDKHA  H P+AQ AFK LMIH +LQ A RIAFRCVLHRCG QDI
Sbjct:   27 SGVSGHSDKHALGHYPKAQCAFKSLMIHEVLQFALRIAFRCVLHRCGIQDI 77          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: K0S3C5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3C5_THAOC)

HSP 1 Score: 73.6 bits (179), Expect = 5.850e-16
Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    6 SGVNRHSDKHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDI 56
            SGV  HSDKHA  + P+AQ AFK+LMIH +LQ   RIA RCVLHRCG QDI
Sbjct:   20 SGVQGHSDKHALGNYPKAQCAFKILMIHEVLQFVLRIAVRCVLHRCGIQDI 70          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: A9U5J8_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U5J8_PHYPA)

HSP 1 Score: 57.4 bits (137), Expect = 2.100e-8
Identity = 29/41 (70.73%), Postives = 29/41 (70.73%), Query Frame = 0
Query:   17 PRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDIR 57
            P   P AQ AFK  MIH ILQ   RIAFRCVLHRC SQDIR
Sbjct:  179 PSDEPRAQLAFKNSMIHGILQFTLRIAFRCVLHRCKSQDIR 219          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: D8UMG8_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UMG8_VOLCA)

HSP 1 Score: 51.6 bits (122), Expect = 2.790e-7
Identity = 26/37 (70.27%), Postives = 27/37 (72.97%), Query Frame = 0
Query:   21 PEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDIR 57
            P+AQ AFK  MIH  LQ   RIAFRCVLHR  SQDIR
Sbjct:   35 PQAQFAFKDSMIHVFLQFTLRIAFRCVLHRSESQDIR 71          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: A0A1U7LWX4_NEOID (Uncharacterized protein n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LWX4_NEOID)

HSP 1 Score: 46.6 bits (109), Expect = 1.100e-5
Identity = 21/27 (77.78%), Postives = 22/27 (81.48%), Query Frame = 0
Query:   31 MIHWILQVARRIAFRCVLHRCGSQDIR 57
            MIH ILQ    IAFRCVLHRCGSQ+IR
Sbjct:    1 MIHGILQFTLLIAFRCVLHRCGSQEIR 27          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: A0A484MRJ4_9ASTE (BZIP domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MRJ4_9ASTE)

HSP 1 Score: 50.4 bits (119), Expect = 1.100e-5
Identity = 25/35 (71.43%), Postives = 27/35 (77.14%), Query Frame = 0
Query:   22 EAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDI 56
            EAQ AFKV M+H ILQ   RIAFR VLHRC S+DI
Sbjct:  499 EAQLAFKVSMVHGILQFTPRIAFRYVLHRCKSRDI 533          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: A0A822ZKL4_NELNU (Uncharacterized protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822ZKL4_NELNU)

HSP 1 Score: 47.8 bits (112), Expect = 1.290e-5
Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 0
Query:   21 PEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDIR 57
            P AQ AFK  M+H ILQ    IAFR VLHRC S+DIR
Sbjct:   14 PRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRDIR 50          
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Match: A0A4U5PRA0_POPAL (Uncharacterized protein n=1 Tax=Populus alba TaxID=43335 RepID=A0A4U5PRA0_POPAL)

HSP 1 Score: 48.5 bits (114), Expect = 5.200e-5
Identity = 31/58 (53.45%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    1 PRG-GASGVNRHSDKHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDIR 57
            PRG GA+  +  +D  + R  P AQ AFK  M+H ILQ    IAFR VLHRC S+DIR
Sbjct:  226 PRGEGATMRDTQADVPSTRR-PRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRDIR 282          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1E7F0G0_9STRA1.640e-1971.70Uncharacterized protein (Fragment) n=2 Tax=Fragila... [more]
A0A524MI88_9PROT9.070e-1970.37Uncharacterized protein n=1 Tax=Nitrosomonadales b... [more]
B8CEF4_THAPS5.160e-1874.51Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K0S3C5_THAOC5.850e-1668.63Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A9U5J8_PHYPA2.100e-870.73Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
D8UMG8_VOLCA2.790e-770.27Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A1U7LWX4_NEOID1.100e-577.78Uncharacterized protein n=1 Tax=Neolecta irregular... [more]
A0A484MRJ4_9ASTE1.100e-571.43BZIP domain-containing protein n=1 Tax=Cuscuta cam... [more]
A0A822ZKL4_NELNU1.290e-564.86Uncharacterized protein n=1 Tax=Nelumbo nucifera T... [more]
A0A4U5PRA0_POPAL5.200e-553.45Uncharacterized protein n=1 Tax=Populus alba TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:29268..29444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1508.1mRNA_C-linearis_contig112.1508.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 29268..29444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1508.1 ID=prot_C-linearis_contig112.1508.1|Name=mRNA_C-linearis_contig112.1508.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=59bp
PRGGASGVNRHSDKHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHR
CGSQDIRR*
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