prot_C-linearis_contig111.1506.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1506.1
Unique Nameprot_C-linearis_contig111.1506.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length409
Homology
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 1.260e-172
Identity = 264/360 (73.33%), Postives = 298/360 (82.78%), Query Frame = 0
Query:    7 LTFIAAFLPSPAAAVEYTVTTCADLADVDNTLATGLTIDSSTFFCDEYTRFRVRNTMTLKATGTAVEFSNFSLKVLGELTVEPDVTFTGVVDQVKNGGVLSVDEGAKATFVGTADFSDNSVLIKQIGPISCGEGCTRIGRGLSYVTKKGGAVHNKGMLTFEGDATFVRNLVSTDDSVEQGKAGALSNTGSGSILFKGKLTMEDNEADGSFEGQGGGIYNRGDIVVDGESYFSNNQASDGGAIYQTKIGTMTFNAMTNFFENIAIDPVGGGVYNEG-VMDFNAGSFFEGNIASSSGDGGLGGAIYNWSGGIITLTGSTTFKANMALAGGAIFNAGANEDFDLPAAVTTFPADTVFVDNDAD 365
            LT IA+ L +PAAAVEYTV TCADLADVD+T  T LTID+STF CDEYTRFRVRN MTLKAT  AVEF NFSLKVLGELTVEPDV F GVVDQVKNGGVLSV EGA ATF+GT++FSDNSV +KQIGP+SCG+GCTRIGRGLSY+ KKGGA+HNKG LTFEGDATF RN V T+DSVEQGKAGA+SNTGSG+ILFK KLTM+DNEADG FEG GG IYNRG+IVV+GES FS N +SDGG IYQT IGTMTFN    F EN A D +GGG+ N+G V++ NAGS FE N AS SGDGGLGGAIYN + G++TL GSTTF+ N A  GGAI+ +  +E+   PA+VTTFP DTVF DN A+
Sbjct:    6 LTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTSDGDEENGEPASVTTFPDDTVFEDNSAE 365          
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 2.460e-165
Identity = 263/370 (71.08%), Postives = 294/370 (79.46%), Query Frame = 0
Query:    1 MKPASCLTFIAAFLPSPAAAVEYTVTTCADLADVDNTLATGLTIDSSTFFCDEYTRFRVRNTMTLKATGTAVEFSNFSLKVLGELTVEPDVTFTGVVDQVKNGGVLSVDEGAKATFVGTADFSDNSVLIKQIGPISCGEGCTRIGRGLSYVTKKGGAVHNKGMLTFEGDATFVRNLVSTDDSVEQGKAGALSNTGSGSILFKGKLTMEDNEADGSFEGQGGGIYNRGDIVVDGESYFSNNQASDGGAIYQTKIGTMTFNAMTNFFENIAIDPVGGGVYNEG-VMDFNAGSFFEGNIASSSGDGGLGGAIYNWSGGIITLTGSTTFKANMALAGGAIFNAGANEDFDLPAAVTTFPADTVFVDNDADVRED 369
            MKP S LT IA  L +PAAAVEYTV TCADLADVD+T  TGLTID+STF CDEYTRF VRN+MTLKAT  AVEF NFSLKVLGELTVEPDVTF GVVDQVKNGGVLSV EGA +TF+GT++FSDNSV +KQ+G +SCG+GC R GRGLSYV KKGGA+HNKG LTFEGDATF RN V T+DSVEQGKAGA+SNTGSG+I FK KLTM+DNEA+G FEG GG IYNRG+I+VDGES FS N ASDGG IYQT IG MTFN+M  F EN A +  GGG+ N G V++ NAGS FE N AS SGDGGLGGAIYN + G +TL GSTTF+ N A  GGAI+    +      A+VTTFP DTVF DN AD   D
Sbjct:    1 MKPCS-LTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDDGSVANGEAASVTTFPDDTVFEDNRADFCPD 369          
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 2.950e-78
Identity = 137/241 (56.85%), Postives = 169/241 (70.12%), Query Frame = 0
Query:  117 VGTADFSDNSVLIKQIGPISCGEGCTRIGRGLSYVTKKGGAVHNKGMLTFEGDATFVRNLVSTDDSVEQGKAGALSNTGSGSILFKGKLTMEDNEADGSFEGQGGGIYNRGDIVVDGESYFSNNQASDGGAIYQTKIGTMTFNAMTNFFENIAIDPVGGGVYNEG-VMDFNAGSFFEGNIASSSGDGGLGGAIYNWSGGIITLTGSTTFKANMALAGGAIFNAGANEDFDLPAAVTTFPAD 356
            +GT++FS+NSV +KQ G ISCG+GCTR  RGL+Y+ KKGGA+HNKG LTF+GDATF RN+  T+ S ++G  GA+SNTGSG+ILFK KLTM+DN+AD +F G GG IYNRG+I+V+G S FS N A+ GG I+QT IGTMTFN M  F EN A +P GGG+ N G V++ NAGS FE N AS+SGDGG GGAI+N                     GGAI+      D D P +VTTFP D
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYT----NDADGPGSVTTFPDD 237          
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 9.390e-75
Identity = 163/355 (45.92%), Postives = 201/355 (56.62%), Query Frame = 0
Query:   25 VTTCADLADVDNTLATGLTIDSSTFFCDEYTRFRVRNTMTLKATGTAVEFSNFSLKVLGELTVEPDVTFTGVVDQVKNGGVLSVDEGAKATFVGTADFSDNSVLIKQIGPISCGEGCTRIGRGLSYVTKKGGAVHNKGMLTFEGDATFVRNLVSTDDSVEQGKA--GALSNTGSGSILFKGKLTMEDNEADGSFEG-QGGGIYNRGDIVVDGESYFSNNQASDGGAIYQTKIGTMTFNAMTNFFENIAIDPVGGGVYN-EGVMDFNAGSFFEGNIASSSGDGGLGGAIYNWSGGIITLTGSTTFKANMALAGGAIFNAGAN------EDFDLPAAVTTFPADTVFVDNDADVRED 369
            V +C + A +D  + T +TI  + F CDEYTR  +R+ M LK++   V FSNF+LKV G LTVEPDV FTGV    KNGGVL ++ GA   F GTA+FSDNS++   I   +  E           + +KGGA+H KG LTFE DATF  NL   +D +  G    GA+S    GSI F GKLTM DNEAD  F G QGG I+NRGDIVVDGE+ F+ N    GGAI+Q K  T+ FN    F  N  +D  GG + N  G +  NAGS F    A +SGDGGL             LTGSTTF+ N    GGA+FN+         ED        ++P DT+F DNDA    D
Sbjct:   26 VGSCTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEE-----------ILRKGGAIHTKGSLTFEKDATFSGNL---NDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQYCND 366          
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.010e-45
Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 0
Query:  207 MEDNEADGSFEGQGGGIYNRGDIVVDGESYFSNNQASDGGAIYQTKIGTMTFNAMTNFFENIAIDPVGGGVYNEG-VMDFNAGSFFEGNIASSSGDGGLGGAIYNWSGGIITLTGSTTFKANMALAGGAIFNAGANEDFDLPAAVTTFPADTVFVDNDAD 365
            M +N+ DG + G GG IYNRG+I V+GES FS N++SDGG IYQT IG MTFN+M  FF N+A +  GGG+ N+G V++ NAGS FE N A+++ DGG GGAI+N +GG++TL G TTF+ N A  GGAI+      D   PA+VTTFP DTVF DN AD
Sbjct:    1 MNENDTDGQYGGLGGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYT-----DDGYPASVTTFPDDTVFEDNSAD 155          
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 4.030e-42
Identity = 84/108 (77.78%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MKPASCLTFIAAFLPSPAAAVEYTVTTCADLADVDNTLATGLTIDSSTFFCDEYTRFRVRNTMTLKATGTAVEFSNFSLKVLGELTVEPDVTFTGVVDQVKNGGVLSV 108
            MKP S LTFIA+ L +PAAAVEY VTTCADLADVD+T  TGLTID++TF CDEYTRFRVRN+MTLKAT +AVEF NFSLKVLGELTVEPDVTF GVVDQ   G   SV
Sbjct:    1 MKPVS-LTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEGTTPSV 107          
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.120e-12
Identity = 79/284 (27.82%), Postives = 123/284 (43.31%), Query Frame = 0
Query:   25 VTTCADLADVDNTLATGLTIDSSTFF----CDEYTRFRVR-NTMTLKATGTAVEF------SNFSLKVLG--ELTVEPDVTFTG--VVDQVKNGGVLSVDEGAKATFVGTADFSDNSVLIKQIGPISCGEGCTRIGRGLSYVTKKGGAVHNKGMLTFEGDATFVRNLVSTDDSVEQGKAGALSNTGSGSILFKGKLTMEDNEADGSFEGQGGGIYNRGDIVVDGESYFSNNQASDGGAIYQTKIGTMTF-NAMTNFFENIAI-DPVGGGVYNEGVMDFNAGSFF 291
            + TC DL    N   T   ID    F    C+ +T   +  NT+TL ++     F      +N  L V    EL  E  V F G   V+ + +GG + V EG+   F+   +  D  ++ ++                 +   + GG V   G    +G+ATF R  ++       G  GA+    +GS+ F   + + +      F GQGGGIYN G++ + G+S F +  AS G AIY  +     F N  + FF ++   D VG G+ N G  +F+  + F
Sbjct:   22 IETCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVNFIGDEEVELMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSD-----------FASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALF 294          
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.000e-8
Identity = 49/140 (35.00%), Postives = 70/140 (50.00%), Query Frame = 0
Query:  155 GGAVHNKGMLTFEGDATFVR-NLVSTDDSVEQGKAGALSNTGSGSILFKGKLTMEDNEADGSFEGQGGGIYNRGDIVVDGESYFSNNQASDGGAIYQTKIGTMTF-NAMTNFFENIAI-DPVGGGVYNEGVMDFNAGSFF 291
            GG V   G  T  GDATF     V   +S   G  GA+  + +GS+ F   +T+ +      F GQGGGIYN G++ V G S F +  AS G A+Y  +   + F N  T  F +++  D VG  +Y  G  +F+  + F
Sbjct:   23 GGCVRTAGTFTVNGDATFTGCESVGAGESAP-GPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISASSGVAVYNGEGAQLRFTNGATACFRDLSNRDSVGSALYYLGYFEFSGPALF 161          
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Match: UPI00069117F6 (T9SS type A sorting domain-containing protein n=1 Tax=Sediminibacter sp. Hel_I_10 TaxID=1392490 RepID=UPI00069117F6)

HSP 1 Score: 56.2 bits (134), Expect = 9.760e-5
Identity = 53/156 (33.97%), Postives = 82/156 (52.56%), Query Frame = 0
Query:  193 NTGSGSILFKGKLTMEDNEADGS----FEGQGGGIY--NRGDIVVDGESYFSNNQASDGGAIYQTKIGTMTFNAMTNFFENIAI-DPVGGGVY--NEGVMDFNAGSFFEGNIASSSGDGGLGGAIYNWSGGIITLTGSTTFKANMAL-AGGAIFNA 338
            N+G+G  +    +  + N+A  +      G GG ++    GD+ +   S  +N  A +GG ++    GTMT + +T   +N+AI D  GGG    N G +  +A +   GNIA  +  GG GGAI+N +GG+++L    T   N A  AGGAI +A
Sbjct:  180 NSGAGLGVILNNVDFDGNDAGAASGNALPGNGGALHVTGAGDVTMTNGSVTNNVAAKEGGGLWNGS-GTMTLSNVT-LEDNMAIGDATGGGALFNNGGTLMVDALTTLTGNIAMGATPGGRGGAIFNNTGGVLSLASGLTISGNYASRAGGAIEDA 333          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI1.260e-17273.33Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI2.460e-16571.08Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI2.950e-7856.85Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5KTD4_9PHAE9.390e-7545.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQG1_ECTSI1.010e-4556.88Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FQG2_ECTSI4.030e-4277.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FGT1_ECTSI2.120e-1227.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG63_ECTSI2.000e-835.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00069117F69.760e-533.97T9SS type A sorting domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 235..249
e-value: 0.014
score: 15.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..408
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.769

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:434590..439684 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1506.1mRNA_C-linearis_contig111.1506.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 434564..439717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1506.1 ID=prot_C-linearis_contig111.1506.1|Name=mRNA_C-linearis_contig111.1506.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=409bp
MKPASCLTFIAAFLPSPAAAVEYTVTTCADLADVDNTLATGLTIDSSTFF
CDEYTRFRVRNTMTLKATGTAVEFSNFSLKVLGELTVEPDVTFTGVVDQV
KNGGVLSVDEGAKATFVGTADFSDNSVLIKQIGPISCGEGCTRIGRGLSY
VTKKGGAVHNKGMLTFEGDATFVRNLVSTDDSVEQGKAGALSNTGSGSIL
FKGKLTMEDNEADGSFEGQGGGIYNRGDIVVDGESYFSNNQASDGGAIYQ
TKIGTMTFNAMTNFFENIAIDPVGGGVYNEGVMDFNAGSFFEGNIASSSG
DGGLGGAIYNWSGGIITLTGSTTFKANMALAGGAIFNAGANEDFDLPAAV
TTFPADTVFVDNDADVREDDGAHAYTFRIFLLEQAAQACFVAAAVARARQ
DIAINISM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat