prot_C-linearis_contig111.1496.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1496.1
Unique Nameprot_C-linearis_contig111.1496.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length885
Homology
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: D7FL61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL61_ECTSI)

HSP 1 Score: 1029 bits (2660), Expect = 0.000e+0
Identity = 621/864 (71.88%), Postives = 667/864 (77.20%), Query Frame = 0
Query:   31 MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLTLRDLDGEGNVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSS--IHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARS------LAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMDGFGDQAVIWQRLLTCSLFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEERPQVSQTITIGSSFSCSTPRSSSSTSMSGG-MWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPSRRGRYRRRNXXXXXXNGRHGRGTSADAEDLSDGNAGSSSLISDSDXXXXXXSSEDDAASDAMDASSLSFRDGASGGMLARSRRRRAEKKAERKEMKDTHKRLAGLGGRGRRGXXXXRSGCGAXXXXXXXXESRHMSRKMADTYLTESMGMSVTPGSSVACGSLMGRSLGHAMSSSFADDGLVW 885
            MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQP+E+KEL+DA+FRFDWR SDKIVQSFSGLL HLVSANSTCMVPAMHMLVRNLVLT RDLD EGNVDPAALTRQH+VH ALQASLTLVPSGRSKL+GVLKQNYPHRRLRAE+LSDYALHALRVVQYAPLIEESVLRLIIEK LEIDVEIKIMDTGEAV++DE+DECDALFTMDDV+DGTAD KKQ T+EVDEMA+KLDGVMLVVF YLDQRLTA+ASLPPE IL TP+        AA      +G EAG DS +   KGR   S G  QGMEPVARLLKSLLLVFEE+ILPTHRSKFVQFVLFFASGRA GLGYAL SKL+ VL D+ +PKLTRQSSVAYLASFLAR SFVD SLVS+A+Q+LL+WA +YLD++ D   A+  QAL   TP SK  FETPVA R RARPQSWHG N P  SAN G     DG  G M APMSA+ ARS                   R ADHMLFYSVCQATFYVMCFRGDELAAM+GF  QAVIWQRLLTC L+PLRRCLDTVRREFARLCCGLM+ YL  DL+EHLAGISEER QVSQTIT+GSSFSCSTPRSSSS SMS   MWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSH Y+  MYN+WKAQDD+  R  +               G  T A A D                XXXXXX          MDASS+SFRDGASG + ARS  +R E   ++K                   XXXX      XXXXXXXXE+R MSRKMADTY+TESM  SVTP SSVA GSLMGRSLG AMSSSFADDGLVW
Sbjct:    1 MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVIDDEEDECDALFTMDDVVDGTADKKKQTTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILGTPVAGDGGCEAAAATQAVLQGDEAGSDSGTL--KGRGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLGDESRPKLTRQSSVAYLASFLARASFVDPSLVSTAVQSLLDWAGQYLDQYADASVATPVQALG--TPSSKG-FETPVATRVRARPQSWHG-NHPRRSANGG-----DGGGGVMQAPMSAMAARSGXXXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDQMYNTWKAQDDSSRRSTKS-------------SGARTPAGAGDXXXXXXXXXXXX----XXXXXXXXXXXXXXXDMDASSMSFRDGASG-LRARSLHQRNEAAKKKKXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXEARRMSRKMADTYITESM--SVTPASSVAVGSLMGRSLGQAMSSSFADDGLVW 829          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A6H5JAN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN6_9PHAE)

HSP 1 Score: 783 bits (2023), Expect = 3.530e-275
Identity = 436/565 (77.17%), Postives = 472/565 (83.54%), Query Frame = 0
Query:   15 QDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLTLRDLDGEGNVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSS--IHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSK-------GRAADHMLFYSVCQATFYVMCFRGDELAAMDGFGDQAVI 570
            QDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQP+E+KEL+DA+FRFDWR SDKIVQSFSGLL HLVSANSTCMVPAMHMLVRNLVLT RDLD EGNVDPAALTRQH+VH ALQASLTLVPSGRSKL+GVLKQNYPHRRLRAE+LSDYALHALRVVQYAPLIEESVLRLIIEK LEIDVEIKIMDTGEAVV+DEDDECDALFTMDDV+DGTAD KKQ+T+EVDEMA+KLDGVMLVVF YLDQRLTA+ASLPPE ILET +         A A    +G EAG DS +   KGR   S G  QGMEPVARLLKSLL+VFEE+ILPTHRSKFVQFVLFFASGRA GLGYAL SKL+ VL+D+ +PKLTRQSSVAYLASF+AR SFVD SLVS+A+Q+LL+WA +YLD++ D   A+  QAL   TP SK  FETPVA R RARPQSWHG N P  SAN G     DG  G + APMSAV +RS  GG                R ADHMLFYSVCQATFYVMCFRGDELAAM+GF  QA++
Sbjct:   28 QDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQSTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETSVAGDGGCEAVAAAQAVLQGDEAGSDSCTP--KGRGGGSTGGMQGMEPVARLLKSLLVVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLKDESRPKLTRQSSVAYLASFVARASFVDPSLVSTAVQSLLDWAGQYLDQYADASIATPVQALG--TPSSKG-FETPVATRVRARPQSWHG-NHPRRSANGG-----DGGGGMIDAPMSAVASRSGVGGXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQALL 581          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: D0NT31_PHYIT (RNA polymerase I-specific transcription initiation factor rrn3, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0NT31_PHYIT)

HSP 1 Score: 222 bits (565), Expect = 1.470e-57
Identity = 217/742 (29.25%), Postives = 328/742 (44.20%), Query Frame = 0
Query:   24 FLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRAS-DKI-VQSFSGLLSHLVSANSTCMVPAMHMLVRNL-------------VLTLRDLDGEG---------------------------------------NVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGD---QAVIWQRLLTCS--LFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTI-TIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 702
            F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++ ++++P+ Y+ L+D +F+FD  AS D + V+ ++  + HLVS+N+  +VP +HMLVRN+             VL   +   E                                        ++D    +R    HE L+  LTLVP+  + L+ +L +++PH+R+ A     Y  + LRV  Y   + E VL L++++ + IDVEIK+ ++ E            +FTMDD LD         + +VDEMA+KLD +MLV+F +++Q  +A +S P     ++  +S+             G+  +D                   +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    L + +D   A+  +   R         ET   R  R   +S +               G  GD                            R     +F S  Q   Y++CFRG E+A  D G G    +++ W+RLL  S    PL  C  TV  EF              +LVE    +SEE   +V Q I T+ SS S S      S   + G  + S +     LG+   PL++FFPFDPYLLRRS  Y+  +Y  WK  D   S
Sbjct:   29 FIENALDLLIKGNAKSYQYLIQQLTLVPPPVATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPQEKELPPDLRVLAQTEQKNEEETTKKSTKAGGISIGGSFGADTVATPTPVAKVVHEAKGPSLDERIQSRFEAAHETLERVLTLVPTAANVLFPILCEHFPHKRMDASTQVAYLRNVLRVTGYVSGLRERVLGLVLDQLVAIDVEIKLDESEED-----------MFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQ--SAVSSSPTSASSDSVASST-------------GDKNLD-------------------VRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKW----LHDQMDVYDAAHQEQQERDG-------ETAAERDERLLEESEN--------------MGITGD----------------------------RGFQESIFISSLQTVCYMVCFRGLEIATSDDGAGYDFLRSLGWERLLVTSGGYCPLAYCQQTVATEFL-------------NLVEAFDLVSEECLERVDQAIGTVSSSTSKSAKSMERSKKPTAGSASASTL-----LGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHADPTSS 653          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A3M6VKK9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKK9_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.750e-56
Identity = 219/748 (29.28%), Postives = 332/748 (44.39%), Query Frame = 0
Query:   11 TSVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQL-LTRDDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASD--KIVQSFSGLLSHLVSANSTCMVPAMHMLVRN--------LVLTLRDL-DGEGNVD-----------------------PAALTRQHH---------------VHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCS--LFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEERPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 702
            TS  ++ +L + +F+++AL +  KG+   YQ+L+ QL L      T  +++  L +C++ I+++P+ Y+ L+D +F+FD  A+   + V  ++  + HLVS+N+  +VP +HMLVRN        L   LR L D E N                         PAA T Q                  H  L+  LTLVP+  + L+ +L +++PH+R+ A     Y  + LRV +Y   + E VL L+I++ + IDVEIK+ ++ E V           FTMDD LD        ++ +VDEMA+KLD +ML++F +++Q   + AS  P  +    + S+    A ++GG +     VD                   M   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    +D + D +     +  N     S A  E                                                  L  G+    S+   +    ++ S  Q   Y+MCFRG E+A  D G G +   ++ W+RL+  S    PL  C  TV  EF              +L+E    +SEE  +    + IG+    ST  + ++ SM       +    +  L     PL++FFPFDPYLLRRS  YV  +Y  WK  D   S
Sbjct:  178 TSPTKEEVLSMHRFIENALDLLLKGNPKSYQYLIQQLTLIPASIATRRKIFRALPRCISTIAREPKAYRALLDVLFKFDLLANGDPQEVDDYTRFIVHLVSSNTVYVVPTLHMLVRNMRHPQLKELSPELRALADAEQNKQQEAKKTAASGDIAMENSFGAMSTPAAETVQESKGSSLDERIQARFQAAHHTLERVLTLVPTAANVLFPILCEHFPHKRMDAATQMGYLRNVLRVTEYVGGLRERVLGLVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDMLPPDDSSRQVDEMADKLDQMMLIMFEHIEQ---SAASCSPVLVSSETIAST----AASNGGKD-----VD-------------------MRQAALVFKYLLKVFEHSILNTHRSKYPQFLLFYVCRLDPQFQDIFISQLLASSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDLY-DAIHLEQQEQANDRVGESAAEQE------------------------------------------------ERLLEGAEKVESAGEHSFQESIYISSLQTVCYMMCFRGLEIATSDNGAGYEFLRSLGWERLIVTSSGYCPLAYCQQTVATEFL-------------NLLEAFDLVSEECLERVD-LAIGT---VSTSSTKTAKSMERSKKPTAGSASSSTLLSQRQPLETFFPFDPYLLRRSFRYVGPLYLYWKHADPTSS 817          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A3R7JLG2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JLG2_9STRA)

HSP 1 Score: 218 bits (555), Expect = 3.170e-56
Identity = 214/733 (29.20%), Postives = 313/733 (42.70%), Query Frame = 0
Query:   23 KFLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLT--------LRDLDGEGNVDPAALT-------------------------------------RQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCSL--FPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 702
            +F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++ ++++P  Y+ L+D +F+FD     + V+ +   + HLVS+N+  +VP +HMLVRNL           LR L  E + +P   T                                     R   VHE L   L LVP+  + L+ VL +++PH+RL A+    Y  + LRV  Y   + E VL L+I++ + IDVEIK+ ++ E V           FTMDD LD         + +VDEMA+KLD +MLV+F ++ Q                 +++SI   ++A    E           SS G+       S  +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFL R  ++  + +  AL  LL+W    L + +D   A+  +  N      +A      A R     +      P                                         S  R     ++ S  Q   Y++CFRG E++  D G G +   ++ W+RLL  S    PL  C  TV  EF              +LVE L  +SE    +V Q +        S   S S+ SM       S    A  L     PL++FFPFDPYLLRRS  Y+  +Y  WK  D   S
Sbjct:   28 QFIENALDLLIKGNVKSYQYLIQQLTLSTAPVATRRKIFRALPRCISTMAKEPRAYRALLDVLFKFDLINDYQEVEDYISFVVHLVSSNTVYVVPTLHMLVRNLCRPQPHQLPPDLRSLLEEESEEPKKKTIAGGITIGGSFGAVAEVTTPVVESVNKGPNLEERIQKRFEAVHETLGRVLALVPTAANFLFPVLCEHFPHKRLDADTQVAYLRNVLRVTSYMSGLRERVLGLVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDLLPPDDASHQVDEMADKLDRMMLVMFEHIGQ-----------------ISASISTQSDAVASVE-----------SSNGK------TSVDVHHAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQMPPTTRQSCAAYLASFLGRAKYISVAYLQKALYHLLKW----LHDQMDIYDAAHQKLQNEQ----EARNGESAAERDECLLEESEALEP-----------------------------------------SDSRGFQDNIYISTLQTVCYLVCFRGLEISCSDDGTGYEFLRSLGWERLLVTSTGYCPLAFCQQTVATEFL-------------NLVETLDLVSESCLERVDQAV-----GGVSASSSKSAKSMERSKKPTSASASAAALLGQRQPLETFFPFDPYLLRRSFRYIGPLYLYWKHADPTSS 648          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A6A3TZ42_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TZ42_9STRA)

HSP 1 Score: 216 bits (551), Expect = 9.040e-56
Identity = 218/749 (29.11%), Postives = 325/749 (43.39%), Query Frame = 0
Query:   11 TSVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRAS-DKI-VQSFSGLLSHLVSANSTCMVPAMHMLVRNL-----------VLTLRDLDGE-----------------------------------GNVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCSL--FPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTI-TIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 702
            TS  +  +  +  F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++ ++++P  Y+ L+D +F+ D  AS D + V+ ++  + HLVS+N+  ++PA+HMLVRN+           +  L D   E                                    ++D    TR    H+ L+  L LVP+  + L+ +L +++PH+R+ A     Y  + LRV  Y   + E VL LII++ + IDVEIK+ ++ E V           FTMDD LD        ++ +VDEMA+KLD +MLV+F +++Q      S   E + +                A  GE  VD                   +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    L + +D   A+  + L+R         E+ V R  R   +       P G                                         +A    ++ S  Q   Y++CFRG E+A  D G G +   ++ W+RLL  S    PL  C  TV  EF              +LVE    +SEE   +V Q I T+ S  S ST     S   + G    S +     LG+   PL++FFPFDPYLLR S  Y+   Y  WK  D   S
Sbjct:    6 TSPTEQEVASMHHFIENALDLLIKGNAKSYQYLIQQLTLMPPPVATRRKIFRALPRCISTMAREPRAYRALLDVLFKCDLLASGDPLEVEDYTSFIVHLVSSNTVYVLPALHMLVRNMRRPQGKELPPDLRALEDKKDEPKKPATTGGITIGESFGASVAAPTPVAEVVQEAQGSSLDERIQTRFEAAHKTLERVLALVPTAANVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLIIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDLLPPNDSSRQVDEMADKLDQMMLVMFEHIEQ-----CSASSETVTD----------------ASNGEKDVD-------------------VRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRVDPQFQDVFISQLLSSSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKW----LHDQMDIYDAAHQEQLDRDEAREG---ESSVERDERLLEEREKRETHPTGD----------------------------------------QAFQESIYISSLQTVCYMVCFRGLEIATSDDGAGYEFLRSLGWERLLVTSTGYCPLAYCQQTVATEFL-------------NLVEAFNLVSEECLERVDQAIGTVSSLTSKSTKSMERSKKPTAGSAPASTL-----LGQ-RQPLETFFPFDPYLLRLSFRYIGPSYLYWKHADPTSS 637          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A662XUA0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUA0_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.220e-55
Identity = 209/744 (28.09%), Postives = 324/744 (43.55%), Query Frame = 0
Query:   12 SVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRD-DPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIV--QSFSGLLSHLVSANSTCMVPAMHMLVRNLV-------------------------------------------LTLRDLDGEGNVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGD---QAVIWQRLLTCS--LFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 702
            S+ ++ ++ +  F+++AL +  KG+G  Y +LV QL      P T  +++  L +C++ ++++P  Y+ L+D +F+FD  A D  +  Q ++  + HLVS+N+  ++P +HMLVRNL                                            +   +     ++D     R    H  L+  L LVP+  + L+ VL +++PH+R+ A     Y  + LRV  Y   + E VL L+I++ + IDVEIK+ ++ E V           FTMDD LD         + +VDEMA+KLD +MLV+F +++Q  +          +E+P ++ +            GE  +D                   +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    +D + D       + L+          E+ V R  R   +                                   A +L        +S+ R     +F S  Q   Y++CFRG E+A  D G G    +++ W+RLL  S    PL  C  TV  EF              +LVE    +SE    +V Q I   S+ S    +S   ++      T S  + A  LG+   PL++FFPFDPYLLRRS  ++  +Y  WK  D   S
Sbjct:   96 SISEEEVVSMHHFIENALDLLLKGNGKSYHYLVQQLTAASAPPATRRKIFRALPRCISTMAREPRAYRALLDVLFKFDLLAGDDPLEAQDYARFVVHLVSSNTVYVIPTLHMLVRNLCRPQLHQLPPALQTQARAEAAAEAELKKPSNGVTIAIGGSMASPVPTEEKKKAPSLDERIQMRFDAAHATLERVLALVPTAANVLFPVLCEHFPHKRMDAATQVAYLRNVLRVTTYVSGLRERVLALVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDLLPPDDASRQVDEMADKLDQMMLVMFEHIEQAGS----------VESPASTDL----------SNGEKELD-------------------VRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRLDPQFQDVFISQLLATSLDPQTPPTTRQSCAAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVY-DAAQQQLQEQLDARV------GESAVDREERVLEE-----------------------------------AEAL-------ETSEARGFQESIFISTLQTVCYLLCFRGLEIARSDDGAGYDFLRSLGWERLLVTSSGYCPLAFCQQTVATEFL-------------NLVETFDLVSESCLDRVDQAIGGVSAKSSKAAKSMERSTKP----TVSSASAATLLGQ-RQPLETFFPFDPYLLRRSFRFIGPLYLYWKHADPTSS 722          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A8K1C8A3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8A3_PYTOL)

HSP 1 Score: 214 bits (546), Expect = 4.230e-55
Identity = 208/742 (28.03%), Postives = 325/742 (43.80%), Query Frame = 0
Query:   11 TSVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQL---LTRDDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFSGLLSHLVSANSTCMVPAMHMLVRNLV-----------------------LTLRDLDGEGNVD------PAALT------------RQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELA-AMDGFGDQAVI-WQRLLTC--SLFPLRRCLDTVRREFARLCCGLMENYLAPDLV--EHLAGISEERPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 702
            T V  + L  + +F+++AL +  KG+  +Y +L+ QL     + +  T  R++  L +C++ ++++P+ Y +L+D +F+FD+      + +++  + HLVS+N+  ++P + ML+RNL                        +T+  +   G+        PAA T            R   VH+ LQ  L LVP+  + L+ V+ +++PH+RL A     Y  + L +  Y P ++E +  LII+  + +DVEIK+           D++ + +FTMDD LD   D+   +  +VDEMA+KLD +M+++F Y+D+++                                             GR  SS  +S  +E  A++ K LL VFE SIL THRSK+ QF+LFF             S+L+    D   P  TR S  AYLASFLAR  F+  S +  AL  LL+W    +D +      S P   + S  G                                    G + +A A+     + P                 A    ++ S  Q   Y++CFRG E+A A +G+     + W+RLL    S  PL  C  TV  EF        E +   DLV  E +  + +    V +     S  S S  R++   S S  M  PS  +    LG    PL++FFPFDPYLLRRS  ++  +Y  WK  D   S
Sbjct:   16 TPVGDEDLDTLQQFIENALDLMLKGNATNYLYLIQQLSGAAGKSNKNTRRRIFQTLPRCISTMAKEPKAYHQLLDVLFKFDFLCERDEIDAYTSFIVHLVSSNTVYVLPTLQMLLRNLCRPAQLPPALAAAVAAQAKPAPAPVTVGKIAIGGSFGAPVAPVPAAPTPEPIDVEKLIKERFADVHKTLQRVLKLVPTASNALFSVVAEHFPHKRLDAPFQIAYLANVLELSTYVPGLQERIFGLIIDHLVAVDVEIKL-----------DEKEEDVFTMDDFLDD--DLLPGDGTQVDEMADKLDQMMVLMFEYIDRQV---------------------------------------------GRSSSSATLSN-VEQAAQIFKFLLKVFEHSILNTHRSKYPQFLLFFTCQMDPQFQDIFISQLLTASLDPQTPPSTRHSCGAYLASFLARAKFISVSYIQKALYHLLKWMHDQMDVYDTLFVPSQPDEDSSSVDGRG----------------------------------GIEAEAAALEPKNGSEPG----------------AFHESIYISTLQTVCYLICFRGLEVAQAENGYEFLRTLGWERLLITPTSYCPLAFCQQTVATEFL----NFAETF---DLVSEECIDQVDQAINSVGKLQKRSSKGSKSMERTAPPPSASSMM--PSSTSGGSVLGL-RQPLETFFPFDPYLLRRSFRFIGPLYLYWKHADPTSS 638          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: H3GYT5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYT5_PHYRM)

HSP 1 Score: 212 bits (540), Expect = 5.240e-55
Identity = 208/731 (28.45%), Postives = 317/731 (43.37%), Query Frame = 0
Query:   24 FLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRAS-DKI-VQSFSGLLSHLVSANSTCMVPAMHMLVRNLVL------------------TLRD-------LDGEGNVDPAAL-----------------TRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCSL--FPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 702
            F+++AL +  KG+   Y +L+ QL     P  T  +++  L +C++ ++++P  Y+ L+D +F+FD  AS D + V  ++  + HLVS+N+  +VP +HMLVRNL                    TL+        + G    D AA+                  R    H  L+  L LVP+  + L+ +L +++PH+R+ A     Y  + LRV  Y   + E VL L+I++ + IDVEIK+ ++ E V           FTMDD LD         + +VDEMA+KLD +MLV+F +++    + +    E +  T  +S+                                + V Q     A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    L + +D   A   + +++    +    E+   R  R                                          L   S+   ++  R     ++ S  Q   Y++CFRG E+A  D G G +   ++ W+RLL       PL  C  TV  EF              +LVE    +SEE   +V QTI   S+ S  + +S   +        P+       LG+   PL++FFPFDPYLLRRS  Y+  +Y  WK  D   S
Sbjct:   29 FIENALDLLVKGNAKSYDYLLQQLTLAPAPVATRRKIFRALPRCISAMAREPRAYRALLDVLFKFDMLASGDPLEVDDYTSFVVHLVSSNTVYVVPTLHMLVRNLRRPQTKELPPDLKAQIQEQETLKPVKTGAIAIGGSFGADVAAVPTPLVEPKAPSLDERIQARFEAAHATLERVLALVPTATNVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEHSAASSSPASVETVAPTETSSN-----------------------------EKDVNVRQA----ALIFKHLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKW----LHDQMDVYDAVHQEQMDQDEVRNG---ESAAEREER------------------------------------------LLEESLKMETNGERGFQESIYISTLQTVCYLVCFRGLEIATNDDGAGYEFLRSLGWERLLVAGTGYCPLAYCQQTVATEFL-------------NLVETFDLVSEECLERVDQTIGTVSALSIKSAKSMERSKKPTAGSAPAATL----LGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHADPTSS 648          
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A0W8CKU1_PHYNI (RNA polymerase I-specific transcription initiation factor RRN3 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CKU1_PHYNI)

HSP 1 Score: 214 bits (546), Expect = 3.180e-54
Identity = 214/743 (28.80%), Postives = 322/743 (43.34%), Query Frame = 0
Query:   24 FLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRAS-DKI-VQSFSGLLSHLVSANSTCMVPAMHMLVRN---------------LVLTLRDLDGEGNVDPAAL-------------------------------------TRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQS--WHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCS--LFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 702
            F+++AL +  KG+   Y +L+ QL     P  T  +++  L +C++ ++++P+ Y+ L+D +F+FD  AS D + V+ ++  + HLVS+N+  +VP +HMLVRN               L  T ++ + E    PA                                        R    H+ L+  LTLVP+  + L+ +L +++PH+R+ A     Y  + LRV  Y   + E VL L++++ + IDVEIK+ ++ E            +FTMDD LD         + +VDEMA+KLD +MLV+F +++Q   + AS  P  +    + ++             G+  VD                   +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    L + +D    +  + L R         ET   R  R   +S   H T                                              R     +F S  Q   Y++CFRG E+A  D G G +   ++ W+RLL  S    PL  C  TV  EF              +LVE    +SEE   +V Q I    + S ST +S+ S   S    T    + +  LG+   PL++FFPFDPYLLRRS  Y+  +Y  WK  D   S
Sbjct:  248 FIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQAKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVLDQLVAIDVEIKLDESEED-----------MFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQ---SAASSSPASVSSDSVAAN-------------GDKDVD-------------------VRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKW----LHDQMDIYDVAHQEQLEREG-------ETAAERDERLLEESEKMHTTGE--------------------------------------------RGFQESIFISSLQTVCYMVCFRGLEIATSDDGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFL-------------NLVEAFDLVSEECLERVDQAI---GTVSASTTKSAKSMERSKKP-TAGSASASTLLGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHADPTSS 871          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL61_ECTSI0.000e+071.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAN6_9PHAE3.530e-27577.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D0NT31_PHYIT1.470e-5729.25RNA polymerase I-specific transcription initiation... [more]
A0A3M6VKK9_9STRA2.750e-5629.28Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A3R7JLG2_9STRA3.170e-5629.20Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A6A3TZ42_9STRA9.040e-5629.11Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A662XUA0_9STRA1.220e-5528.09Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A8K1C8A3_PYTOL4.230e-5528.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GYT5_PHYRM5.240e-5528.45Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0W8CKU1_PHYNI3.180e-5428.80RNA polymerase I-specific transcription initiation... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 780..800
IPR007991RNA polymerase I specific transcription initiation factor RRN3PFAMPF05327RRN3coord: 530..696
e-value: 3.1E-24
score: 85.5
coord: 22..448
e-value: 4.9E-65
score: 220.1
IPR007991RNA polymerase I specific transcription initiation factor RRN3PANTHERPTHR12790TRANSCRIPTION INITIATION FACTOR IA RRN3coord: 10..783

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:267563..276672 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1496.1mRNA_C-linearis_contig111.1496.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 267563..276846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1496.1 ID=prot_C-linearis_contig111.1496.1|Name=mRNA_C-linearis_contig111.1496.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=885bp
MAANGQWRAETSVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTR
DDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFS
GLLSHLVSANSTCMVPAMHMLVRNLVLTLRDLDGEGNVDPAALTRQHHVH
EALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAP
LIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDG
TADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPL
TSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLK
SLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMK
PKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLA
ASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRG
ADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYV
MCFRGDELAAMDGFGDQAVIWQRLLTCSLFPLRRCLDTVRREFARLCCGL
MENYLAPDLVEHLAGISEERPQVSQTITIGSSFSCSTPRSSSSTSMSGGM
WTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDN
PSRRGRYRRRNKTKTRSNGRHGRGTSADAEDLSDGNAGSSSLISDSDSDS
DDDSSEDDAASDAMDASSLSFRDGASGGMLARSRRRRAEKKAERKEMKDT
HKRLAGLGGRGRRGGGGERSGCGASSSEEDDEESRHMSRKMADTYLTESM
GMSVTPGSSVACGSLMGRSLGHAMSSSFADDGLVW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007991RNA_pol_I_trans_ini_fac_RRN3