mRNA_C-linearis_contig111.1496.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig111.1496.1
Unique NamemRNA_C-linearis_contig111.1496.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: D7FL61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL61_ECTSI)

HSP 1 Score: 1029 bits (2660), Expect = 0.000e+0
Identity = 621/864 (71.88%), Postives = 667/864 (77.20%), Query Frame = 1 
Query:  265 MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLTLRDLDGEGNVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSS--IHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARS------LAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMDGFGDQAVIWQRLLTCSLFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEERPQVSQTITIGSSFSCSTPRSSSSTSMSGG-MWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPSRRGRYRRRNXXXXXXNGRHGRGTSADAEDLSDGNAGSSSLISDSDXXXXXXSSEDDAASDAMDASSLSFRDGASGGMLARSRRRRAEKKAERKEMKDTHKRLAGLGGRGRRGXXXXRSGCGAXXXXXXXXESRHMSRKMADTYLTESMGMSVTPGSSVACGSLMGRSLGHAMSSSFADDGLVW 2829
            MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQP+E+KEL+DA+FRFDWR SDKIVQSFSGLL HLVSANSTCMVPAMHMLVRNLVLT RDLD EGNVDPAALTRQH+VH ALQASLTLVPSGRSKL+GVLKQNYPHRRLRAE+LSDYALHALRVVQYAPLIEESVLRLIIEK LEIDVEIKIMDTGEAV++DE+DECDALFTMDDV+DGTAD KKQ T+EVDEMA+KLDGVMLVVF YLDQRLTA+ASLPPE IL TP+        AA      +G EAG DS +   KGR   S G  QGMEPVARLLKSLLLVFEE+ILPTHRSKFVQFVLFFASGRA GLGYAL SKL+ VL D+ +PKLTRQSSVAYLASFLAR SFVD SLVS+A+Q+LL+WA +YLD++ D   A+  QAL   TP SK  FETPVA R RARPQSWHG N P  SAN G     DG  G M APMSA+ ARS                   R ADHMLFYSVCQATFYVMCFRGDELAAM+GF  QAVIWQRLLTC L+PLRRCLDTVRREFARLCCGLM+ YL  DL+EHLAGISEER QVSQTIT+GSSFSCSTPRSSSS SMS   MWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSH Y+  MYN+WKAQDD+  R  +               G  T A A D                XXXXXX          MDASS+SFRDGASG + ARS  +R E   ++K                   XXXX      XXXXXXXXE+R MSRKMADTY+TESM  SVTP SSVA GSLMGRSLG AMSSSFADDGLVW
Sbjct:    1 MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVIDDEEDECDALFTMDDVVDGTADKKKQTTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILGTPVAGDGGCEAAAATQAVLQGDEAGSDSGTL--KGRGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLGDESRPKLTRQSSVAYLASFLARASFVDPSLVSTAVQSLLDWAGQYLDQYADASVATPVQALG--TPSSKG-FETPVATRVRARPQSWHG-NHPRRSANGG-----DGGGGVMQAPMSAMAARSGXXXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDQMYNTWKAQDDSSRRSTKS-------------SGARTPAGAGDXXXXXXXXXXXX----XXXXXXXXXXXXXXXDMDASSMSFRDGASG-LRARSLHQRNEAAKKKKXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXEARRMSRKMADTYITESM--SVTPASSVAVGSLMGRSLGQAMSSSFADDGLVW 829
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BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A6H5JAN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN6_9PHAE)

HSP 1 Score: 783 bits (2022), Expect = 3.670e-274
Identity = 436/565 (77.17%), Postives = 472/565 (83.54%), Query Frame = 1 
Query:  217 QDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLTLRDLDGEGNVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSS--IHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSK-------GRAADHMLFYSVCQATFYVMCFRGDELAAMDGFGDQAVI 1884
            QDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQP+E+KEL+DA+FRFDWR SDKIVQSFSGLL HLVSANSTCMVPAMHMLVRNLVLT RDLD EGNVDPAALTRQH+VH ALQASLTLVPSGRSKL+GVLKQNYPHRRLRAE+LSDYALHALRVVQYAPLIEESVLRLIIEK LEIDVEIKIMDTGEAVV+DEDDECDALFTMDDV+DGTAD KKQ+T+EVDEMA+KLDGVMLVVF YLDQRLTA+ASLPPE ILET +         A A    +G EAG DS +   KGR   S G  QGMEPVARLLKSLL+VFEE+ILPTHRSKFVQFVLFFASGRA GLGYAL SKL+ VL+D+ +PKLTRQSSVAYLASF+AR SFVD SLVS+A+Q+LL+WA +YLD++ D   A+  QAL   TP SK  FETPVA R RARPQSWHG N P  SAN G     DG  G + APMSAV +RS  GG                R ADHMLFYSVCQATFYVMCFRGDELAAM+GF  QA++
Sbjct:   28 QDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQSTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETSVAGDGGCEAVAAAQAVLQGDEAGSDSCTP--KGRGGGSTGGMQGMEPVARLLKSLLVVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLKDESRPKLTRQSSVAYLASFVARASFVDPSLVSTAVQSLLDWAGQYLDQYADASIATPVQALG--TPSSKG-FETPVATRVRARPQSWHG-NHPRRSANGG-----DGGGGMIDAPMSAVASRSGVGGXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQALL 581
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BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: D0NT31_PHYIT (RNA polymerase I-specific transcription initiation factor rrn3, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0NT31_PHYIT)

HSP 1 Score: 222 bits (565), Expect = 2.600e-57
Identity = 217/742 (29.25%), Postives = 328/742 (44.20%), Query Frame = 1 
Query:  244 FLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRAS-DKI-VQSFSGLLSHLVSANSTCMVPAMHMLVRNL-------------VLTLRDLDGEG---------------------------------------NVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGD---QAVIWQRLLTCS--LFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTI-TIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 2280
            F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++ ++++P+ Y+ L+D +F+FD  AS D + V+ ++  + HLVS+N+  +VP +HMLVRN+             VL   +   E                                        ++D    +R    HE L+  LTLVP+  + L+ +L +++PH+R+ A     Y  + LRV  Y   + E VL L++++ + IDVEIK+ ++ E            +FTMDD LD         + +VDEMA+KLD +MLV+F +++Q  +A +S P     ++  +S+             G+  +D                   +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    L + +D   A+  +   R         ET   R  R   +S +               G  GD                            R     +F S  Q   Y++CFRG E+A  D G G    +++ W+RLL  S    PL  C  TV  EF              +LVE    +SEE   +V Q I T+ SS S S      S   + G  + S +     LG+   PL++FFPFDPYLLRRS  Y+  +Y  WK  D   S
Sbjct:   29 FIENALDLLIKGNAKSYQYLIQQLTLVPPPVATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPQEKELPPDLRVLAQTEQKNEEETTKKSTKAGGISIGGSFGADTVATPTPVAKVVHEAKGPSLDERIQSRFEAAHETLERVLTLVPTAANVLFPILCEHFPHKRMDASTQVAYLRNVLRVTGYVSGLRERVLGLVLDQLVAIDVEIKLDESEED-----------MFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQ--SAVSSSPTSASSDSVASST-------------GDKNLD-------------------VRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKW----LHDQMDVYDAAHQEQQERDG-------ETAAERDERLLEESEN--------------MGITGD----------------------------RGFQESIFISSLQTVCYMVCFRGLEIATSDDGAGYDFLRSLGWERLLVTSGGYCPLAYCQQTVATEFL-------------NLVEAFDLVSEECLERVDQAIGTVSSSTSKSAKSMERSKKPTAGSASASTL-----LGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHADPTSS 653
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BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A3R7JLG2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JLG2_9STRA)

HSP 1 Score: 218 bits (555), Expect = 5.450e-56
Identity = 214/733 (29.20%), Postives = 313/733 (42.70%), Query Frame = 1 
Query:  241 KFLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLT--------LRDLDGEGNVDPAALT-------------------------------------RQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCSL--FPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 2280
            +F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++ ++++P  Y+ L+D +F+FD     + V+ +   + HLVS+N+  +VP +HMLVRNL           LR L  E + +P   T                                     R   VHE L   L LVP+  + L+ VL +++PH+RL A+    Y  + LRV  Y   + E VL L+I++ + IDVEIK+ ++ E V           FTMDD LD         + +VDEMA+KLD +MLV+F ++ Q                 +++SI   ++A    E           SS G+       S  +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFL R  ++  + +  AL  LL+W    L + +D   A+  +  N      +A      A R     +      P                                         S  R     ++ S  Q   Y++CFRG E++  D G G +   ++ W+RLL  S    PL  C  TV  EF              +LVE L  +SE    +V Q +        S   S S+ SM       S    A  L     PL++FFPFDPYLLRRS  Y+  +Y  WK  D   S
Sbjct:   28 QFIENALDLLIKGNVKSYQYLIQQLTLSTAPVATRRKIFRALPRCISTMAKEPRAYRALLDVLFKFDLINDYQEVEDYISFVVHLVSSNTVYVVPTLHMLVRNLCRPQPHQLPPDLRSLLEEESEEPKKKTIAGGITIGGSFGAVAEVTTPVVESVNKGPNLEERIQKRFEAVHETLGRVLALVPTAANFLFPVLCEHFPHKRLDADTQVAYLRNVLRVTSYMSGLRERVLGLVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDLLPPDDASHQVDEMADKLDRMMLVMFEHIGQ-----------------ISASISTQSDAVASVE-----------SSNGK------TSVDVHHAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQMPPTTRQSCAAYLASFLGRAKYISVAYLQKALYHLLKW----LHDQMDIYDAAHQKLQNEQ----EARNGESAAERDECLLEESEALEP-----------------------------------------SDSRGFQDNIYISTLQTVCYLVCFRGLEISCSDDGTGYEFLRSLGWERLLVTSTGYCPLAFCQQTVATEFL-------------NLVETLDLVSESCLERVDQAV-----GGVSASSSKSAKSMERSKKPTSASASAAALLGQRQPLETFFPFDPYLLRRSFRYIGPLYLYWKHADPTSS 648
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BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A3M6VKK9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKK9_9STRA)

HSP 1 Score: 220 bits (560), Expect = 6.550e-56
Identity = 219/748 (29.28%), Postives = 332/748 (44.39%), Query Frame = 1 
Query:  205 TSVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQL-LTRDDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASD--KIVQSFSGLLSHLVSANSTCMVPAMHMLVRN--------LVLTLRDL-DGEGNVD-----------------------PAALTRQHH---------------VHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCS--LFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEERPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 2280
            TS  ++ +L + +F+++AL +  KG+   YQ+L+ QL L      T  +++  L +C++ I+++P+ Y+ L+D +F+FD  A+   + V  ++  + HLVS+N+  +VP +HMLVRN        L   LR L D E N                         PAA T Q                  H  L+  LTLVP+  + L+ +L +++PH+R+ A     Y  + LRV +Y   + E VL L+I++ + IDVEIK+ ++ E V           FTMDD LD        ++ +VDEMA+KLD +ML++F +++Q   + AS  P  +    + S+    A ++GG +     VD                   M   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    +D + D +     +  N     S A  E                                                  L  G+    S+   +    ++ S  Q   Y+MCFRG E+A  D G G +   ++ W+RL+  S    PL  C  TV  EF              +L+E    +SEE  +    + IG+    ST  + ++ SM       +    +  L     PL++FFPFDPYLLRRS  YV  +Y  WK  D   S
Sbjct:  178 TSPTKEEVLSMHRFIENALDLLLKGNPKSYQYLIQQLTLIPASIATRRKIFRALPRCISTIAREPKAYRALLDVLFKFDLLANGDPQEVDDYTRFIVHLVSSNTVYVVPTLHMLVRNMRHPQLKELSPELRALADAEQNKQQEAKKTAASGDIAMENSFGAMSTPAAETVQESKGSSLDERIQARFQAAHHTLERVLTLVPTAANVLFPILCEHFPHKRMDAATQMGYLRNVLRVTEYVGGLRERVLGLVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDMLPPDDSSRQVDEMADKLDQMMLIMFEHIEQ---SAASCSPVLVSSETIAST----AASNGGKD-----VD-------------------MRQAALVFKYLLKVFEHSILNTHRSKYPQFLLFYVCRLDPQFQDIFISQLLASSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDLY-DAIHLEQQEQANDRVGESAAEQE------------------------------------------------ERLLEGAEKVESAGEHSFQESIYISSLQTVCYMMCFRGLEIATSDNGAGYEFLRSLGWERLIVTSSGYCPLAYCQQTVATEFL-------------NLLEAFDLVSEECLERVD-LAIGT---VSTSSTKTAKSMERSKKPTAGSASSSTLLSQRQPLETFFPFDPYLLRRSFRYVGPLYLYWKHADPTSS 817
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BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A6A3TZ42_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TZ42_9STRA)

HSP 1 Score: 216 bits (550), Expect = 2.080e-55
Identity = 218/749 (29.11%), Postives = 325/749 (43.39%), Query Frame = 1 
Query:  205 TSVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRAS-DKI-VQSFSGLLSHLVSANSTCMVPAMHMLVRNL-----------VLTLRDLDGE-----------------------------------GNVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCSL--FPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTI-TIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 2280
            TS  +  +  +  F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++ ++++P  Y+ L+D +F+ D  AS D + V+ ++  + HLVS+N+  ++PA+HMLVRN+           +  L D   E                                    ++D    TR    H+ L+  L LVP+  + L+ +L +++PH+R+ A     Y  + LRV  Y   + E VL LII++ + IDVEIK+ ++ E V           FTMDD LD        ++ +VDEMA+KLD +MLV+F +++Q      S   E + +                A  GE  VD                   +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    L + +D   A+  + L+R         E+ V R  R   +       P G                                         +A    ++ S  Q   Y++CFRG E+A  D G G +   ++ W+RLL  S    PL  C  TV  EF              +LVE    +SEE   +V Q I T+ S  S ST     S   + G    S +     LG+   PL++FFPFDPYLLR S  Y+   Y  WK  D   S
Sbjct:    6 TSPTEQEVASMHHFIENALDLLIKGNAKSYQYLIQQLTLMPPPVATRRKIFRALPRCISTMAREPRAYRALLDVLFKCDLLASGDPLEVEDYTSFIVHLVSSNTVYVLPALHMLVRNMRRPQGKELPPDLRALEDKKDEPKKPATTGGITIGESFGASVAAPTPVAEVVQEAQGSSLDERIQTRFEAAHKTLERVLALVPTAANVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLIIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDLLPPNDSSRQVDEMADKLDQMMLVMFEHIEQ-----CSASSETVTD----------------ASNGEKDVD-------------------VRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRVDPQFQDVFISQLLSSSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKW----LHDQMDIYDAAHQEQLDRDEAREG---ESSVERDERLLEEREKRETHPTGD----------------------------------------QAFQESIYISSLQTVCYMVCFRGLEIATSDDGAGYEFLRSLGWERLLVTSTGYCPLAYCQQTVATEFL-------------NLVEAFNLVSEECLERVDQAIGTVSSLTSKSTKSMERSKKPTAGSAPASTL-----LGQ-RQPLETFFPFDPYLLRLSFRYIGPSYLYWKHADPTSS 637
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BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A662XUA0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUA0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.830e-55
Identity = 209/744 (28.09%), Postives = 324/744 (43.55%), Query Frame = 1 
Query:  208 SVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRD-DPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIV--QSFSGLLSHLVSANSTCMVPAMHMLVRNLV-------------------------------------------LTLRDLDGEGNVDPAALTRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGD---QAVIWQRLLTCS--LFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 2280
            S+ ++ ++ +  F+++AL +  KG+G  Y +LV QL      P T  +++  L +C++ ++++P  Y+ L+D +F+FD  A D  +  Q ++  + HLVS+N+  ++P +HMLVRNL                                            +   +     ++D     R    H  L+  L LVP+  + L+ VL +++PH+R+ A     Y  + LRV  Y   + E VL L+I++ + IDVEIK+ ++ E V           FTMDD LD         + +VDEMA+KLD +MLV+F +++Q  +          +E+P ++ +            GE  +D                   +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    +D + D       + L+          E+ V R  R   +                                   A +L        +S+ R     +F S  Q   Y++CFRG E+A  D G G    +++ W+RLL  S    PL  C  TV  EF              +LVE    +SE    +V Q I   S+ S    +S   ++      T S  + A  LG+   PL++FFPFDPYLLRRS  ++  +Y  WK  D   S
Sbjct:   96 SISEEEVVSMHHFIENALDLLLKGNGKSYHYLVQQLTAASAPPATRRKIFRALPRCISTMAREPRAYRALLDVLFKFDLLAGDDPLEAQDYARFVVHLVSSNTVYVIPTLHMLVRNLCRPQLHQLPPALQTQARAEAAAEAELKKPSNGVTIAIGGSMASPVPTEEKKKAPSLDERIQMRFDAAHATLERVLALVPTAANVLFPVLCEHFPHKRMDAATQVAYLRNVLRVTTYVSGLRERVLALVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDLLPPDDASRQVDEMADKLDQMMLVMFEHIEQAGS----------VESPASTDL----------SNGEKELD-------------------VRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRLDPQFQDVFISQLLATSLDPQTPPTTRQSCAAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVY-DAAQQQLQEQLDARV------GESAVDREERVLEE-----------------------------------AEAL-------ETSEARGFQESIFISTLQTVCYLLCFRGLEIARSDDGAGYDFLRSLGWERLLVTSSGYCPLAFCQQTVATEFL-------------NLVETFDLVSESCLDRVDQAIGGVSAKSSKAAKSMERSTKP----TVSSASAATLLGQ-RQPLETFFPFDPYLLRRSFRFIGPLYLYWKHADPTSS 722
[Close]
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: H3GYT5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYT5_PHYRM)

HSP 1 Score: 212 bits (540), Expect = 8.590e-55
Identity = 208/731 (28.45%), Postives = 317/731 (43.37%), Query Frame = 1 
Query:  244 FLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRAS-DKI-VQSFSGLLSHLVSANSTCMVPAMHMLVRNLVL------------------TLRD-------LDGEGNVDPAAL-----------------TRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCSL--FPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 2280
            F+++AL +  KG+   Y +L+ QL     P  T  +++  L +C++ ++++P  Y+ L+D +F+FD  AS D + V  ++  + HLVS+N+  +VP +HMLVRNL                    TL+        + G    D AA+                  R    H  L+  L LVP+  + L+ +L +++PH+R+ A     Y  + LRV  Y   + E VL L+I++ + IDVEIK+ ++ E V           FTMDD LD         + +VDEMA+KLD +MLV+F +++    + +    E +  T  +S+                                + V Q     A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    L + +D   A   + +++    +    E+   R  R                                          L   S+   ++  R     ++ S  Q   Y++CFRG E+A  D G G +   ++ W+RLL       PL  C  TV  EF              +LVE    +SEE   +V QTI   S+ S  + +S   +        P+       LG+   PL++FFPFDPYLLRRS  Y+  +Y  WK  D   S
Sbjct:   29 FIENALDLLVKGNAKSYDYLLQQLTLAPAPVATRRKIFRALPRCISAMAREPRAYRALLDVLFKFDMLASGDPLEVDDYTSFVVHLVSSNTVYVVPTLHMLVRNLRRPQTKELPPDLKAQIQEQETLKPVKTGAIAIGGSFGADVAAVPTPLVEPKAPSLDERIQARFEAAHATLERVLALVPTATNVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVIDQLVAIDVEIKLDESEEDV-----------FTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEHSAASSSPASVETVAPTETSSN-----------------------------EKDVNVRQA----ALIFKHLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKW----LHDQMDVYDAVHQEQMDQDEVRNG---ESAAEREER------------------------------------------LLEESLKMETNGERGFQESIYISTLQTVCYLVCFRGLEIATNDDGAGYEFLRSLGWERLLVAGTGYCPLAYCQQTVATEFL-------------NLVETFDLVSEECLERVDQTIGTVSALSIKSAKSMERSKKPTAGSAPAATL----LGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHADPTSS 648
[Close]
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A8K1C8A3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8A3_PYTOL)

HSP 1 Score: 214 bits (545), Expect = 9.620e-55
Identity = 208/742 (28.03%), Postives = 325/742 (43.80%), Query Frame = 1 
Query:  205 TSVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQL---LTRDDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFSGLLSHLVSANSTCMVPAMHMLVRNLV-----------------------LTLRDLDGEGNVD------PAALT------------RQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELA-AMDGFGDQAVI-WQRLLTC--SLFPLRRCLDTVRREFARLCCGLMENYLAPDLV--EHLAGISEERPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 2280
            T V  + L  + +F+++AL +  KG+  +Y +L+ QL     + +  T  R++  L +C++ ++++P+ Y +L+D +F+FD+      + +++  + HLVS+N+  ++P + ML+RNL                        +T+  +   G+        PAA T            R   VH+ LQ  L LVP+  + L+ V+ +++PH+RL A     Y  + L +  Y P ++E +  LII+  + +DVEIK+           D++ + +FTMDD LD   D+   +  +VDEMA+KLD +M+++F Y+D+++                                             GR  SS  +S  +E  A++ K LL VFE SIL THRSK+ QF+LFF             S+L+    D   P  TR S  AYLASFLAR  F+  S +  AL  LL+W    +D +      S P   + S  G                                    G + +A A+     + P                 A    ++ S  Q   Y++CFRG E+A A +G+     + W+RLL    S  PL  C  TV  EF        E +   DLV  E +  + +    V +     S  S S  R++   S S  M  PS  +    LG    PL++FFPFDPYLLRRS  ++  +Y  WK  D   S
Sbjct:   16 TPVGDEDLDTLQQFIENALDLMLKGNATNYLYLIQQLSGAAGKSNKNTRRRIFQTLPRCISTMAKEPKAYHQLLDVLFKFDFLCERDEIDAYTSFIVHLVSSNTVYVLPTLQMLLRNLCRPAQLPPALAAAVAAQAKPAPAPVTVGKIAIGGSFGAPVAPVPAAPTPEPIDVEKLIKERFADVHKTLQRVLKLVPTASNALFSVVAEHFPHKRLDAPFQIAYLANVLELSTYVPGLQERIFGLIIDHLVAVDVEIKL-----------DEKEEDVFTMDDFLDD--DLLPGDGTQVDEMADKLDQMMVLMFEYIDRQV---------------------------------------------GRSSSSATLSN-VEQAAQIFKFLLKVFEHSILNTHRSKYPQFLLFFTCQMDPQFQDIFISQLLTASLDPQTPPSTRHSCGAYLASFLARAKFISVSYIQKALYHLLKWMHDQMDVYDTLFVPSQPDEDSSSVDGRG----------------------------------GIEAEAAALEPKNGSEPG----------------AFHESIYISTLQTVCYLICFRGLEVAQAENGYEFLRTLGWERLLITPTSYCPLAFCQQTVATEFL----NFAETF---DLVSEECIDQVDQAINSVGKLQKRSSKGSKSMERTAPPPSASSMM--PSSTSGGSVLGL-RQPLETFFPFDPYLLRRSFRFIGPLYLYWKHADPTSS 638
[Close]
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Match: A0A0W8CKU1_PHYNI (RNA polymerase I-specific transcription initiation factor RRN3 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CKU1_PHYNI)

HSP 1 Score: 214 bits (546), Expect = 5.430e-54
Identity = 214/743 (28.80%), Postives = 322/743 (43.34%), Query Frame = 1 
Query:  244 FLQSALAMKAKGDGHHYQHLVAQLLTRDDP-ETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRAS-DKI-VQSFSGLLSHLVSANSTCMVPAMHMLVRN---------------LVLTLRDLDGEGNVDPAAL-------------------------------------TRQHHVHEALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDGTADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPLTSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMKPKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLAASTPQALNRSTPGSKAAFETPVARRSRARPQS--WHGTNPPPGSANAGAPRGADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYVMCFRGDELAAMD-GFGDQ---AVIWQRLLTCS--LFPLRRCLDTVRREFARLCCGLMENYLAPDLVEHLAGISEE-RPQVSQTITIGSSFSCSTPRSSSSTSMSGGMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDNPS 2280
            F+++AL +  KG+   Y +L+ QL     P  T  +++  L +C++ ++++P+ Y+ L+D +F+FD  AS D + V+ ++  + HLVS+N+  +VP +HMLVRN               L  T ++ + E    PA                                        R    H+ L+  LTLVP+  + L+ +L +++PH+R+ A     Y  + LRV  Y   + E VL L++++ + IDVEIK+ ++ E            +FTMDD LD         + +VDEMA+KLD +MLV+F +++Q   + AS  P  +    + ++             G+  VD                   +   A + K LL VFE SIL THRSK+ QF+LF+             S+L+    D   P  TRQS  AYLASFLAR  ++  + +  AL  LL+W    L + +D    +  + L R         ET   R  R   +S   H T                                              R     +F S  Q   Y++CFRG E+A  D G G +   ++ W+RLL  S    PL  C  TV  EF              +LVE    +SEE   +V Q I    + S ST +S+ S   S    T    + +  LG+   PL++FFPFDPYLLRRS  Y+  +Y  WK  D   S
Sbjct:  248 FIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQAKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVLDQLVAIDVEIKLDESEED-----------MFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQ---SAASSSPASVSSDSVAAN-------------GDKDVD-------------------VRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKW----LHDQMDIYDVAHQEQLEREG-------ETAAERDERLLEESEKMHTTGE--------------------------------------------RGFQESIFISSLQTVCYMVCFRGLEIATSDDGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFL-------------NLVEAFDLVSEECLERVDQAI---GTVSASTTKSAKSMERSKKP-TAGSASASTLLGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHADPTSS 871
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL61_ECTSI0.000e+071.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAN6_9PHAE3.670e-27477.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D0NT31_PHYIT2.600e-5729.25RNA polymerase I-specific transcription initiation... [more]
A0A3R7JLG2_9STRA5.450e-5629.20Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A3M6VKK9_9STRA6.550e-5629.28Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A6A3TZ42_9STRA2.080e-5529.11Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A662XUA0_9STRA2.830e-5528.09Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
H3GYT5_PHYRM8.590e-5528.45Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8K1C8A3_PYTOL9.620e-5528.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8CKU1_PHYNI5.430e-5428.80RNA polymerase I-specific transcription initiation... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:267563..276846 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1040.8
Seed ortholog evalue3.6e-301
Seed eggNOG ortholog2880.D7FL61
Preferred nameRRN3
KEGG koko:K15216
Hectar predicted targeting categoryother localisation
GOsGO:0000120,GO:0000182,GO:0000976,GO:0001013,GO:0001042,GO:0001046,GO:0001047,GO:0001067,GO:0001163,GO:0001164,GO:0001167,GO:0001169,GO:0001179,GO:0001181,GO:0001188,GO:0001701,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006356,GO:0006360,GO:0006361,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007000,GO:0007028,GO:0007275,GO:0007399,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009303,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0019899,GO:0022008,GO:0022607,GO:0022613,GO:0023051,GO:0023057,GO:0030154,GO:0030718,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036099,GO:0042254,GO:0042592,GO:0042790,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0044798,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070063,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098727,GO:0098781,GO:0120035,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1901797,GO:1902253,GO:1902254,GO:1902531,GO:1902532,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000026,GO:2000112,GO:2000142,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.rna polymerase i-specific transcription initiation factor
EggNOG OGsKOG2434@1,KOG2434@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-19_005380.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Exons13
Model size2831
Cds size2655
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1496.1prot_C-linearis_contig111.1496.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig111 267563..276672 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927482.8039472-CDS-C-linearis_contig111:267562..2681321622927482.8039472-CDS-C-linearis_contig111:267562..268132Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 267563..268132 -
1690879726.7032871-CDS-C-linearis_contig111:267562..2681321690879726.7032871-CDS-C-linearis_contig111:267562..268132Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 267563..268132 -
1622927482.8193767-CDS-C-linearis_contig111:268611..2688391622927482.8193767-CDS-C-linearis_contig111:268611..268839Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 268612..268839 -
1690879726.7164137-CDS-C-linearis_contig111:268611..2688391690879726.7164137-CDS-C-linearis_contig111:268611..268839Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 268612..268839 -
1622927482.8330555-CDS-C-linearis_contig111:269360..2695161622927482.8330555-CDS-C-linearis_contig111:269360..269516Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 269361..269516 -
1690879726.7264924-CDS-C-linearis_contig111:269360..2695161690879726.7264924-CDS-C-linearis_contig111:269360..269516Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 269361..269516 -
1622927482.8453333-CDS-C-linearis_contig111:270265..2705711622927482.8453333-CDS-C-linearis_contig111:270265..270571Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 270266..270571 -
1690879726.7349324-CDS-C-linearis_contig111:270265..2705711690879726.7349324-CDS-C-linearis_contig111:270265..270571Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 270266..270571 -
1622927482.862686-CDS-C-linearis_contig111:271531..2717201622927482.862686-CDS-C-linearis_contig111:271531..271720Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 271532..271720 -
1690879726.744694-CDS-C-linearis_contig111:271531..2717201690879726.744694-CDS-C-linearis_contig111:271531..271720Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 271532..271720 -
1622927482.8778307-CDS-C-linearis_contig111:272299..2724551622927482.8778307-CDS-C-linearis_contig111:272299..272455Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 272300..272455 -
1690879726.752705-CDS-C-linearis_contig111:272299..2724551690879726.752705-CDS-C-linearis_contig111:272299..272455Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 272300..272455 -
1622927482.89337-CDS-C-linearis_contig111:272761..2730281622927482.89337-CDS-C-linearis_contig111:272761..273028Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 272762..273028 -
1690879726.7614625-CDS-C-linearis_contig111:272761..2730281690879726.7614625-CDS-C-linearis_contig111:272761..273028Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 272762..273028 -
1622927482.9100542-CDS-C-linearis_contig111:273385..2735021622927482.9100542-CDS-C-linearis_contig111:273385..273502Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 273386..273502 -
1690879726.770502-CDS-C-linearis_contig111:273385..2735021690879726.770502-CDS-C-linearis_contig111:273385..273502Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 273386..273502 -
1622927482.923415-CDS-C-linearis_contig111:273928..2739851622927482.923415-CDS-C-linearis_contig111:273928..273985Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 273929..273985 -
1690879726.7824123-CDS-C-linearis_contig111:273928..2739851690879726.7824123-CDS-C-linearis_contig111:273928..273985Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 273929..273985 -
1622927482.9423199-CDS-C-linearis_contig111:274403..2746121622927482.9423199-CDS-C-linearis_contig111:274403..274612Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 274404..274612 -
1690879726.7933748-CDS-C-linearis_contig111:274403..2746121690879726.7933748-CDS-C-linearis_contig111:274403..274612Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 274404..274612 -
1622927482.9577203-CDS-C-linearis_contig111:274836..2750181622927482.9577203-CDS-C-linearis_contig111:274836..275018Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 274837..275018 -
1690879726.8025894-CDS-C-linearis_contig111:274836..2750181690879726.8025894-CDS-C-linearis_contig111:274836..275018Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 274837..275018 -
1622927482.9696631-CDS-C-linearis_contig111:275514..2756301622927482.9696631-CDS-C-linearis_contig111:275514..275630Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 275515..275630 -
1690879726.8108752-CDS-C-linearis_contig111:275514..2756301690879726.8108752-CDS-C-linearis_contig111:275514..275630Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 275515..275630 -
1622927482.9815543-CDS-C-linearis_contig111:276570..2766721622927482.9815543-CDS-C-linearis_contig111:276570..276672Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 276571..276672 -
1690879726.8190806-CDS-C-linearis_contig111:276570..2766721690879726.8190806-CDS-C-linearis_contig111:276570..276672Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 276571..276672 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927482.9954603-UTR-C-linearis_contig111:276672..2768461622927482.9954603-UTR-C-linearis_contig111:276672..276846Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 276673..276846 -
1690879726.8274546-UTR-C-linearis_contig111:276672..2768461690879726.8274546-UTR-C-linearis_contig111:276672..276846Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 276673..276846 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig111.1496.1

>prot_C-linearis_contig111.1496.1 ID=prot_C-linearis_contig111.1496.1|Name=mRNA_C-linearis_contig111.1496.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=885bp
MAANGQWRAETSVDQDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTR
DDPETLWRLYLGLSQCVTIISQQPEEYKELIDAVFRFDWRASDKIVQSFS
GLLSHLVSANSTCMVPAMHMLVRNLVLTLRDLDGEGNVDPAALTRQHHVH
EALQASLTLVPSGRSKLYGVLKQNYPHRRLRAEILSDYALHALRVVQYAP
LIEESVLRLIIEKSLEIDVEIKIMDTGEAVVNDEDDECDALFTMDDVLDG
TADMKKQNTEEVDEMAEKLDGVMLVVFTYLDQRLTAHASLPPEKILETPL
TSSIHGAAEADGGAEGGEAGVDSSSSSSKGRRRSSMGVSQGMEPVARLLK
SLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGYALTSKLIDVLRDDMK
PKLTRQSSVAYLASFLARGSFVDASLVSSALQALLEWAARYLDEHIDGLA
ASTPQALNRSTPGSKAAFETPVARRSRARPQSWHGTNPPPGSANAGAPRG
ADGDAGAMPAPMSAVPARSLAGGSVSGSSSKGRAADHMLFYSVCQATFYV
MCFRGDELAAMDGFGDQAVIWQRLLTCSLFPLRRCLDTVRREFARLCCGL
MENYLAPDLVEHLAGISEERPQVSQTITIGSSFSCSTPRSSSSTSMSGGM
WTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHAYVAGMYNSWKAQDDN
PSRRGRYRRRNKTKTRSNGRHGRGTSADAEDLSDGNAGSSSLISDSDSDS
DDDSSEDDAASDAMDASSLSFRDGASGGMLARSRRRRAEKKAERKEMKDT
HKRLAGLGGRGRRGGGGERSGCGASSSEEDDEESRHMSRKMADTYLTESM
GMSVTPGSSVACGSLMGRSLGHAMSSSFADDGLVW
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mRNA from alignment at C-linearis_contig111:267563..276846-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig111.1496.1 ID=mRNA_C-linearis_contig111.1496.1|Name=mRNA_C-linearis_contig111.1496.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9284bp|location=Sequence derived from alignment at C-linearis_contig111:267563..276846- (Chordaria linearis ClinC8C monoicous)
AGCGAGAGTCGAGTTTGAAATCTCGCAGTTTCAGTAGCTCACCAGCTCAC
CGTGGGCTAGACATCGCATCAGCACCGCGAAGCACCAGGTTGGGGTCGCC
TGGAACACCAGCAGCCTTTAGCCCTGTTTATTCGAGGGCTGGACCGATTC
GTACTGGAGAACGGAGGTGCTGTGATGGCTGCCAATGGCCAATGGCGAGC
CGAAACCTCGGTGGACCAAGATGGATTGCTCCCTGTCGTCAAGTTCTTGC
AGAGCGCCCTGGCCATGAAGGCGAAGGTGCGATGGGTCCTCGCGAGAGAG
AAAGAAGCTGTTTGCTCCGAGATCATGGATAGTGGTATTTTTGTTTATTT
TATGTTACGCTTGAGAGAGGGGTGGAGCGTTGACGGAGTTGGTGTACGTT
CATCTTCGGGCACACCACCTCTCCACCTCTATTGTGGTTTTCGCTCACGA
GAGACCGGTCCCTCTTGGCATATCGATATGTTGCAGCGTGTGTGTGCGCA
CTGTTATGTTTTATGTTTTATGTTTTGTCCGGTGTCAATGTCCTTGGTTT
TCGGGTTTGTCTGCTGACCTTCGGCGCCTTGTTCTCTCTCTCATGTGTTT
GGTGTTCGAGAGGAGAGACATGTGTGTATGCGGCGATAGATTTAGCCGAT
TTGATTCCATCCGCAGTACAGCAGTATTGGTTGATTTTGGCTCTGTTTTG
TGGGCATTTGACGTTTTTCTTTTTTGTGCGAGCTCAACTATGCCAACATG
AACGCCCTCGTTTGTTTTTCTACGCTGCACGGGGATCTGCCTCGCTCACT
ACGTCCTGATCTCGAGTACAGGAGTACAACAGCAGTAGGCGTATACCCAT
CCATCCGCTGGTCCATGAAAAGGCTGACACATCCTATCCTGCATCCGCGG
GAGGGTTCTAGGTTACAGTACACGTATCGAAGCCGTTTGTGTGCGAAGAA
AGCGGCGGTACGACCGCCTCGGCGAGAGCAGCCAACATGCGCTAAGCCTA
GGTATTTAGCTAGGGTAGACAGCACAGGCACAGCAGCACTAAGCCTTGGT
TTCATGGTTTCACTCCCCGTCCCTGTCTTGTCTTGTGGATTGTTGAAGGC
CCGTTGTCGTCGTCGATGTCGATACTCTCATCATATCTCCTCTCCTCTCC
TCTCCTCTCATCTCCTCAACTTGGTGCCGGCCTTCGTGGTGTTGATGTGC
TGATCCATCGCTTCAGGGCGACGGTCACCATTACCAGCACTTGGTGGCGC
AGCTGCTCACCAGGGACGACCCGGAAACTCTGTGGCGCTTATACCTCGGC
CTGTCGCAGTGCGTCACCATCATCTCGCAGCAGTGAGTGGAATGTGGAAT
GTCCTCTGGGTCATGCATACTAGACTATACGGTACCACCTCCAAACCGCC
GAAGGGGGCCCTGACCGCGAAGCCTAATCTCACGTATGTACCGTTTTTTT
TGTCTCGACTGCTCTGTTTATCAGCATGCGTGTCCCAACCCGTTCGAAGT
TTTCAATTTTTCAAACTATCTACCCCACTCCTTGGCATTGGCATTCCATT
CTTCGGTTTGGGTTCGCCTTCACGTGCGACCTCGCTTTCTTCGTGTTGGT
GGCTATTAATTTGTGCTGGTGCTGACGGTGCTGATCGGTAGTCTACGCAG
GTTTGTAGGTAAGAAAACATGTGGGATGAAGTATGGAATCGGCTGGGTGC
GTGGGGGTCGGTGGTTGGGGTTAGGGCTACGGTTACGGAACCCCCTGTAC
TCTAAATCACATATGTACAGTAAGTTCTTCGCGAAATCAGTCCGTGCTGA
TGGTGATGGTGGTGCTGATGGTGGGCAGGCCCGAGGAGTACAAGGAGCTG
ATCGACGCCGTGTTCCGGTTCGACTGGAGGGCAAGCGACAAGATCGTGCA
GTCCTTCAGCGGCCTCCTGTCCCACCTCGTGTCGGCCAACTCCACCTGCA
TGGTGCCGGCGATGCACATGCTCGTCAGGAACCTCGTCCTTACCCTGCGC
GACCTCGACGGTGAGACGATATGACATGGGATGACATGAGAGCTGCTCGT
GATTTTTGGTCAAGTGACTCCAGCATTGAAGGGTTTTGGGTGGGGGGGGA
GCCAGTAATGTACTCGCTTTTTTTTACCGCCTTTGCATTTTGTGTGCGTA
CACGTCCGACCTCCTCTTCGCCGTCACCTTCTTGCCCTTGATTCCACGCC
CCCCCCCCCCCCCTCCCTCCCTTTCTCCTGGCAGGTGAAGGCAACGTGGA
CCCCGCGGCGTTAACGAGGCAGCACCACGTGCACGAGGCTCTGCAGGCCA
GCCTGACCCTCGTGCCCAGCGGCCGCTCAAAGCTGTACGGGGTCCTCAAG
CAGAACTACCCGCACCGCAGGCTGCGGGCGGAGATCCTGTCCGACTACGC
CCTGCACGCGCTCCGGGTGGTGCAGTACGCCCCGCTCATCGAGGTGAGGA
ATGAAGATGAAGGATGAAGGATGAGGAGCGCGACGGGGGGGGAAGTCGTG
TTGTATTGGATTGCCGCTCGAAACGGAGCAAGTAGAGCCGTTTCTGCAGA
ATATGACATCTACAGCATGATGGTTCGGTGTTGTTTAGTTATGTGTCGTG
GTACATCGCAGTTTTTTCATTGCGTTATTTGTCGTGCTTTTGCGTTTGCG
TGTATTTTGGTCTGGGTGGCAGCAAAGCAACAAGCCGGCTCCAGCGGATT
GGGCGATTTTTGTCCGTTGTCCCGTGTTGGCGCATGCATCGAATCAGTGG
TAATGGTATGTGTATTGGTTGCACCTCAGTCGCGTTGTCTATGCAGTCGA
ATCAACCGTTGCGAACACTACCGCCATACCGTACCGTATCCGTGTCGTAT
TGGCACGGCAGGAGAGCGTGCTACGGCTCATCATCGAGAAGAGCCTGGAG
ATCGACGTTGAAATCAAGGTCAGGGGCCTTACTGCTGTGCCATCACATGA
TGCTTCGTGCCGGTTTGCTCGTGTCGCGTTTTGGGGGGTTGTTTTTCTTT
TGTTTCTTGTACATTGTCGTGTTGTTGGCTCACGCAAATGATTCGATACA
TCTCTGTGCCGTTCCTGTTTGATTTAGTGTCAGTGTTTCGTGTGCCATAC
TGATTTGTGTCAACCCTATTTACGTCGGTGATTATGGTTGTGTGGTATAA
GCACCATCTCGAGATGTTTTTTTGTATGTACTTCTATGCATGTATCGAAC
GATGTCGCATCTGGAATCTGCTGTCGGTTGAAGGCACCAATCTGAGATGG
AGCGTTCTTTGCACAAACACCAAACACCAAACAACAACGGAACTGTCAAC
AACAACAACAACAACAACAACAACAACCGTGCCATTTATAACAGATTATG
GACACGGGGGAGGCTGTGGTGAACGACGAGGACGACGAGTGCGATGCCTT
GTTCACGATGGACGACGTGTTGGATGGAACTGCCGACATGAAGAAGCAGA
ACACCGAAGAGGTTAGAGTCAAAGCTTAGTTTAGGCCATTTGTCTAATGT
TCTTGGGCGTGTCGTCAGTGTGGGCAAGAGGCTGGGCGCCAGTTGTTTTC
TATGGTCTGGAGGAAGAAACACGACAAAGTGTCGAACGCTGCTGCTGTCC
TTCCATCTCTCGCCTGTGTGAGCTCTGCAACTGTTGACTGCTGTCGCATC
GCGAGCAATGCGCCTGGAGTCTAGTGCACCCATCACTTCAGCAACCCAAA
GACACCTTGGGAGCGGCAGACTCCCCCTCGGCCGAGAGGCAGTTAGAGAC
GACTTACCACGTGAACCGGCACTTGATGGCGCCTTGACATGTGGCCGGCA
CGATCGCCCTCACCACAGGTGGACGAGATGGCGGAGAAGCTCGACGGCGT
GATGCTGGTGGTGTTCACCTACCTCGACCAGCGCCTCACCGCCCACGCGT
CTTTGCCGCCGGAGAAAATCTTGGAGACCCCCTTGACCTCCTCGATTCAC
GGGGCCGCCGAAGCAGACGGTGGTGCGGAGGGGGGAGAGGCAGGCGTCGA
CAGCAGCAGCAGCAGTAGTAAGGGGAGGAGGAGAAGCTCGATGGGGGTAT
CGCAGGGGATGGAGCCCGTGGCAAGGCTGTTGAAGGTGGGCCGGTCTTCC
CCTCTTGGTGCGTTTTTCTTGGCTTGGTGCTGTTTATGTCCCTTAATGGT
GGAGTGGATGGTCGGACAGAGCAGGGAGCATGCCTACTGTCAGCGGGGAT
ACAGGGGGGCTAGTGCGCTGGCGAAAGCGCGGACGATGGCTTGGTTTGCT
TCTTTAGGCGGTTTACAATGCGGGTGACACACGTATAATAGCAACGCACA
TCCCTACCGGCCCAGCGTGCGCCACCTCAAGCCCGACCTCCCCGCAATGT
TGATGAAATTCAACGTGGCATGGCATGGCATGGCATGACAGTCCCTCCTG
CTAGTGTTCGAGGAGAGCATCCTGCCGACCCACCGGAGCAAGTTCGTGCA
GTTCGTGCTCTTCTTCGCCTCCGGGCGCGCGCACGGCCTGGGCTACGCCC
TGACCTCTAAGCTCATCGACGTCTTGAGAGACGACATGAAGCCAAAGGTG
ACTTAAGTGGCTTAGCTGCCTGACATGCGAGGCCGAAAGGCAATGCTCAG
ATCTAAGTCTGTTGTATTGTTGTTGCCAAGGTGTCAGTTAAAACACATGC
GTGGTTGATGCGTTGTGTGTGGTGGACGGGAAACTTGGGCCGGGTGCAGT
GGAGCGGGACTGTGGAGTGTTTCCTTTCTGGCCGCGTGTGTGTGTGGTGC
GTGTTATCATCGCAGCCGCTATAGCTTTCGACTTTGTAGACCGTCCTTCA
ACGTCCACGCTTGACTTTTGCAGCTCCCAAACATGCCTTATGTCAACGCT
GTTGAGTATGCCATCTGGCCACTTTCGTTTCCCGAAAAAAGAGTGGAGTA
TGTACGTACGTGCTTGTTCCTTTTCCGATCCCCCCATGACGTCGCGTGGT
GGGTCTTTGTTTTGAATCCTCGCTACCCAAAGTCAAAAGTTGCGTGTTGA
AACGAAACGATACGAAACGAAAATGAAACAAAACGAAACGAAACGAAACG
AGCGGTTCTCTTAACAGCTTGACGTTTCCGATCACGCTGGTATTGGTATT
GGCTCTCTACCCTGTGTTTGCTACAGTTGACCCGGCAGAGCAGCGTGGCC
TACCTGGCCAGCTTTCTGGCGAGAGGATCGTTCGTGGATGCGTCCTTGGT
GTCTTCCGCCTTACAAGCGCTCTTGGAGTGGGCAGCCCGGTATCTGGACG
AGCATATTGACGGCTTGGCTGCCTCTACGCCGCAAGCGTTGAACAGGAGC
ACTCCTGGCTCCAAGGTGCGAGGGTGTCACCGCAACGTGCATGTTGATAA
GCATGTTGATAAGCATGTTGATAAGCATGTTGATAAGCATGTTGATAAGC
ATGTTGATAAGCATGTTGATAAGCATGTTGATAAGCATGTTGATAAGCAT
GATGTTAAGCATGATGTTAAGCATGATGGGTAGGGATTGGTGAGTGTTTT
TGTCCTCTCCCCTTGCTTCCTTGCCTAAAAATATTGCAGTGTTGGGTTAA
AAGCCCATGCTGTTGTATTTTGCAACTCCTCCGTGATCGCGATCAGGATC
GTGGTCAGGAATTTGGCTGGTTAGTGACATAGCGTGTCTGAAATCTCTCG
CTCTGGCGTGGCGCATGCGGTGCGTGGCGTAGCCCACGATGGTGATGGTG
GTGGTGATGGTGATGGTGATGGTGCCACCAGCACGCCAGGCTGACTGGTT
GGTGGGTGCAGACGATCACACTAATCAGACGTCTTGTTGGACTCGTTTCT
GGAAGTTTGCGAGCTCGGCCTGCCTCAAGCCGTGTCACACCACGTCATAT
CAGGTCATACCAGGTCATGATCGATCGATCGTGTCGCACATGCAAGACCA
CCGTATATTTTATGTTTTATATTTTATACTGGTACTTCGTAGTATTGTAT
TTTACACGTGCAGTAGACAGACCTGCGCGATGTAGTTTCACCGGAAACGA
AACCATGCCCAGAAGGGAAGGGGAAGGGAAACGAGCAAAACAACACAGCA
AAACGACGATCTTGCTCAAGACCAGCCAATCATGGCCGAAGCCCATCATA
TCATAAATACACCCAGAGAGCAGCACGCTTGCATGGGGGCACCCCGGGAG
AACGCCACGTCATGCCTTGTCTCTTCTTGCGCAGCCAACCTGCCGGTGGT
CCAGGGGTGTAGACAATCTCACCCCTCCCCCCCCTTATTTCCAATCACTC
GACTGTCCCCTTTGTCGTCCCGCAGGCAGCGTTCGAAACCCCCGTGGCAA
GACGGAGCCGGGCGCGGCCCCAGTCCTGGCACGGCACCAACCCCCCCCCG
GGGAGCGCGAACGCCGGAGCTCCCCGTGGGGCAGACGGCGACGCGGGCGC
GATGCCGGCGCCTATGTCGGCCGTGCCGGCCAGGTCGTTGGCGGGCGGCA
GCGTAAGCGGCAGCAGCAGCAAGGGCAGGGCGGCGGACCACATGCTCTTC
TACTCGGTGTGCCAGGCGACCTTCTACGTCATGTGCTTCCGAGGGGACGA
GCTCGCCGCCATGGACGGCTTCGGCGATCAGGTGCTCAATCGCTGCTGTT
GTTGTTGTTGTTGTTGTTGTTTGTTGTTGGTTCTGTGCTGTTGACAGTAC
CGAAGTGTTGGAGCGATGGCACACCTGTGCGATCGTTTTTCAAAGCTTAA
TTTCTCCACAACCAGAGGAGGGTGCGAACACCAAACGACCCGTCATACGA
AAGCTCTCGACGAGATCTACGTAGATCTTTCCAAAACCACCCTTTTCGGC
AGTGATACCGTCCTGGTTGAGGAGAAATTTGATTTAGCTTTGAAAAACGA
TCGCACAGGTGTGCCATCGCTCGAGCACTTACGGCAGTCCCGTTGTTGTT
GGTTTTGTGTTGTTGACAGTGCCGTTGTTGTGTTGTTGGCAGGTGGTGTG
TGGATAAATTTAGGGTGTGCGGTCTAGGTTGGGTTTGGTATCGTGGGTGA
CGGTGATTTCCGCACGCTTGATGTTGGCAAGCGAGACGAGAGAGTGCGGG
TGCGCCTTGCTTCCTCCCTTTCCGTCAAAAGCAACTCGCGCTGTGCTGTA
CGCATATCGGCTTCGCTGGGGTGTTCATGTCAAGATATGGATATGTTACA
TGCCAAATGCGTCTGTGTCCTGCCTTGACACGAAGCGTCCATCGTAACTT
ACCTTACCTGGGATTTTGTTTTTGCCCTCTGCTCTCAGGGGGGTTAGACA
CCGCATGGCTTCGCAGCATCCACATCTCAGGACCTCTTACCCCCCCGCGC
TGTGTTCGCCTCGTTTCTTCCCTCCCGCAGGCGGTAATTTGGCAGCGGCT
TTTGACATGTTCGCTGTTCCCCCTGCGACGGTGCCTCGACACGGTGCGCC
GGGAGTTCGCTCGCTTGTGCTGCGGCCTCATGGAGAACTACCTAGCGCCT
GACTTGGTCGAACACCTCGCGGGAATCTCCGAGGAGGTGAGTCGCCGCGT
GTAGTATTGATATCGCTGTGTGGCTAGAGATGGTCCGCACCTTTACGGCT
AGGTTGGCCGGCTTGCCGCACTACCGACTCCCGAGGCTCTGCCGTGCTGT
CGGGCGGCTTGCCTGACAGCTGGTCTTGCTGCTATGCTACTCAGAGAGGG
GGGCATGGGTGTTTGTAGCATAGTGTGCAACGAGTAGCGTTTTTTTCGGT
GCTTTGCTTTGCTTCCCGGCGACGCCAAGCTTCAGGGCACGGGGTGCTTG
GCATGCTTGGAAATAACATTGTCCAAGGGGGTTCGTTTTCAGACACCACC
ACCACCATCGCAACATCTGCCCCCCCTTCTGTGATTGTGAGGTTTGGCCA
GTCGGGGCCTAAACCGCACTTGTACAGCAGCACCAGCAGCACCATCACCG
GCAACATAACCACCTCTGACAGCAGACAGCGGTGCAGTATTGACTCAGGT
GGTGTTGTTTCCGGCCGCCTCCTGCTCTGCCTCTTCTTGTCCCGCCGGTT
CTCGCAGCGGCCGCAGGTGTCGCAGACGATCACCATCGGCTCCAGCTTCT
CCTGCTCCACCCCTAGATCCTCGTCGTCCACCTCCATGTCCGGCGGCATG
TGGACGCCATCGAGGGTCACCAAGGCGGGAGGGCTAGGGAGGGGGTCCAA
CCCGCTCGACTCGTTCTTCCCCTTCGATCCGTACCTGCTCAGGAGGTCGC
ACGCTTACGTCGCCGGCATGTACAACTCGTGGAAGGTGCGCAGCCTATAA
CCCGCGGGCCCGTGCGGGTGTATGCTTCCTCCCACGGCTCTTTGTCTCTT
GGTGTTGATTCGTTGTGGCCTCTTTTCTTTACCTCGCTGGCGCTGTGTTG
CGCATGCTGCTGTGCGGCGAGGTATCATACGAGTTGGTTCGAGTGTTGCA
ACCATTTTTTTTTTTCTGCGAAGTTTTCTAGCCTCGCTGTGATGCTGTCA
TTTGACTTGCTGTTGCTGGGCGTCCTATGCTTCTGTGGGCTCACCGCCGC
AACGGCAGCAGCAAGAAGCTGACAGCAACTCTAGTTGCACATCTAACCGC
ACATCCGCTACGCTTTTGGAGGGCAGTGCCGCGAGCGAAAGACTACCCTC
CCGTGTATGCCGGGGGGTACAACGACAAACTGCGAAAAGAGTTATCGGCG
TGTCTAAAAAAATCGCGAATCTAAGGCACGCCTCCTTTCTGTTTACACCG
CGTGTACGGGGCAGGCCCAGGACGACAACCCCTCCCGGCGAGGAAGATAT
CGTCGGCGAAACAAGACCAAGACACGGTCGAACGGCAGACACGGCCGCGG
CACCAGCGCCGACGCCGAAGACCTCTCCGACGGCAACGCAGGCTCGTCTT
CTTTGATCAGCGACAGCGACAGCGACAGCGACGACGACTCCTCCGAAGAC
GACGCGGCCTCGGACGCCATGGACGCCAGCTCCCTCAGCTTCCGGGACGG
TGCAAGCGGGGGCATGCTGGCGCGGTCCAGACGGCGGCGCGCGGAAAAAA
AGGCAGAGAGGAAGGAGATGAAGGACACGCACAAGAGGCTCGCCGGGCTC
GGCGGCAGGGGCAGGCGAGGAGGGGGCGGCGAACGCTCCGGGTGCGGCGC
GAGTTCTTCGGAAGAGGATGACGAAGAATCTCGGCATATGTCGAGAAAGA
TGGCCGACACTTACCTCACTGAGAGCATGGGCATGTCCGTGACCCCCGGC
AGCTCCGTGGCGTGCGGCAGCCTCATGGGGAGGAGTCTCGGGCACGCCAT
GTCTTCGTCCTTTGCGGACGACGGGCTGGTGTGG
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Coding sequence (CDS) from alignment at C-linearis_contig111:267563..276846-

>mRNA_C-linearis_contig111.1496.1 ID=mRNA_C-linearis_contig111.1496.1|Name=mRNA_C-linearis_contig111.1496.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5310bp|location=Sequence derived from alignment at C-linearis_contig111:267563..276846- (Chordaria linearis ClinC8C monoicous)
ATGGCTGCCAATGGCCAATGGCGAGCCGAAACCTCGGTGGACCAAGATGG
ATTGCTCCCTGTCGTCAAGTTCTTGCAGAGCGCCCTGGCCATGAAGGCGA
AGATGGCTGCCAATGGCCAATGGCGAGCCGAAACCTCGGTGGACCAAGAT
GGATTGCTCCCTGTCGTCAAGTTCTTGCAGAGCGCCCTGGCCATGAAGGC
GAAGGGCGACGGTCACCATTACCAGCACTTGGTGGCGCAGCTGCTCACCA
GGGACGACCCGGAAACTCTGTGGCGCTTATACCTCGGCCTGTCGCAGTGC
GTCACCATCATCTCGCAGCAGGCGACGGTCACCATTACCAGCACTTGGTG
GCGCAGCTGCTCACCAGGGACGACCCGGAAACTCTGTGGCGCTTATACCT
CGGCCTGTCGCAGTGCGTCACCATCATCTCGCAGCAGCCCGAGGAGTACA
AGGAGCTGATCGACGCCGTGTTCCGGTTCGACTGGAGGGCAAGCGACAAG
ATCGTGCAGTCCTTCAGCGGCCTCCTGTCCCACCTCGTGTCGGCCAACTC
CACCTGCATGGTGCCGGCGATGCACATGCTCGTCAGGAACCTCGTCCTTA
CCCTGCGCGACCTCGACGGCCCGAGGAGTACAAGGAGCTGATCGACGCCG
TGTTCCGGTTCGACTGGAGGGCAAGCGACAAGATCGTGCAGTCCTTCAGC
GGCCTCCTGTCCCACCTCGTGTCGGCCAACTCCACCTGCATGGTGCCGGC
GATGCACATGCTCGTCAGGAACCTCGTCCTTACCCTGCGCGACCTCGACG
GTGAAGGCAACGTGGACCCCGCGGCGTTAACGAGGCAGCACCACGTGCAC
GAGGCTCTGCAGGCCAGCCTGACCCTCGTGCCCAGCGGCCGCTCAAAGCT
GTACGGGGTCCTCAAGCAGAACTACCCGCACCGCAGGCTGCGGGCGGAGA
TCCTGTCCGACTACGCCCTGCACGCGCTCCGGGTGGTGCAGTACGCCCCG
CTCATCGAGGTGAAGGCAACGTGGACCCCGCGGCGTTAACGAGGCAGCAC
CACGTGCACGAGGCTCTGCAGGCCAGCCTGACCCTCGTGCCCAGCGGCCG
CTCAAAGCTGTACGGGGTCCTCAAGCAGAACTACCCGCACCGCAGGCTGC
GGGCGGAGATCCTGTCCGACTACGCCCTGCACGCGCTCCGGGTGGTGCAG
TACGCCCCGCTCATCGAGGAGAGCGTGCTACGGCTCATCATCGAGAAGAG
CCTGGAGATCGACGTTGAAATCAAGGAGAGCGTGCTACGGCTCATCATCG
AGAAGAGCCTGGAGATCGACGTTGAAATCAAGATTATGGACACGGGGGAG
GCTGTGGTGAACGACGAGGACGACGAGTGCGATGCCTTGTTCACGATGGA
CGACGTGTTGGATGGAACTGCCGACATGAAGAAGCAGAACACCGAAGAGA
TTATGGACACGGGGGAGGCTGTGGTGAACGACGAGGACGACGAGTGCGAT
GCCTTGTTCACGATGGACGACGTGTTGGATGGAACTGCCGACATGAAGAA
GCAGAACACCGAAGAGGTGGACGAGATGGCGGAGAAGCTCGACGGCGTGA
TGCTGGTGGTGTTCACCTACCTCGACCAGCGCCTCACCGCCCACGCGTCT
TTGCCGCCGGAGAAAATCTTGGAGACCCCCTTGACCTCCTCGATTCACGG
GGCCGCCGAAGCAGACGGTGGTGCGGAGGGGGGAGAGGCAGGCGTCGACA
GCAGCAGCAGCAGTAGTAAGGGGAGGAGGAGAAGCTCGATGGGGGTATCG
CAGGGGATGGAGCCCGTGGCAAGGCTGTTGAAGGTGGACGAGATGGCGGA
GAAGCTCGACGGCGTGATGCTGGTGGTGTTCACCTACCTCGACCAGCGCC
TCACCGCCCACGCGTCTTTGCCGCCGGAGAAAATCTTGGAGACCCCCTTG
ACCTCCTCGATTCACGGGGCCGCCGAAGCAGACGGTGGTGCGGAGGGGGG
AGAGGCAGGCGTCGACAGCAGCAGCAGCAGTAGTAAGGGGAGGAGGAGAA
GCTCGATGGGGGTATCGCAGGGGATGGAGCCCGTGGCAAGGCTGTTGAAG
TCCCTCCTGCTAGTGTTCGAGGAGAGCATCCTGCCGACCCACCGGAGCAA
GTTCGTGCAGTTCGTGCTCTTCTTCGCCTCCGGGCGCGCGCACGGCCTGG
GCTACGCCCTGACCTCTAAGCTCATCGACGTCTTGAGAGACGACATGAAG
CCAAAGTCCCTCCTGCTAGTGTTCGAGGAGAGCATCCTGCCGACCCACCG
GAGCAAGTTCGTGCAGTTCGTGCTCTTCTTCGCCTCCGGGCGCGCGCACG
GCCTGGGCTACGCCCTGACCTCTAAGCTCATCGACGTCTTGAGAGACGAC
ATGAAGCCAAAGTTGACCCGGCAGAGCAGCGTGGCCTACCTGGCCAGCTT
TCTGGCGAGAGGATCGTTCGTGGATGCGTCCTTGGTGTCTTCCGCCTTAC
AAGCGCTCTTGGAGTGGGCAGCCCGGTATCTGGACGAGCATATTGACGGC
TTGGCTGCCTCTACGCCGCAAGCGTTGAACAGGAGCACTCCTGGCTCCAA
GTTGACCCGGCAGAGCAGCGTGGCCTACCTGGCCAGCTTTCTGGCGAGAG
GATCGTTCGTGGATGCGTCCTTGGTGTCTTCCGCCTTACAAGCGCTCTTG
GAGTGGGCAGCCCGGTATCTGGACGAGCATATTGACGGCTTGGCTGCCTC
TACGCCGCAAGCGTTGAACAGGAGCACTCCTGGCTCCAAGGCAGCGTTCG
AAACCCCCGTGGCAAGACGGAGCCGGGCGCGGCCCCAGTCCTGGCACGGC
ACCAACCCCCCCCCGGGGAGCGCGAACGCCGGAGCTCCCCGTGGGGCAGA
CGGCGACGCGGGCGCGATGCCGGCGCCTATGTCGGCCGTGCCGGCCAGGT
CGTTGGCGGGCGGCAGCGTAAGCGGCAGCAGCAGCAAGGGCAGGGCGGCG
GACCACATGCTCTTCTACTCGGTGTGCCAGGCGACCTTCTACGTCATGTG
CTTCCGAGGGGACGAGCTCGCCGCCATGGACGGCTTCGGCGATCAGGCAG
CGTTCGAAACCCCCGTGGCAAGACGGAGCCGGGCGCGGCCCCAGTCCTGG
CACGGCACCAACCCCCCCCCGGGGAGCGCGAACGCCGGAGCTCCCCGTGG
GGCAGACGGCGACGCGGGCGCGATGCCGGCGCCTATGTCGGCCGTGCCGG
CCAGGTCGTTGGCGGGCGGCAGCGTAAGCGGCAGCAGCAGCAAGGGCAGG
GCGGCGGACCACATGCTCTTCTACTCGGTGTGCCAGGCGACCTTCTACGT
CATGTGCTTCCGAGGGGACGAGCTCGCCGCCATGGACGGCTTCGGCGATC
AGGCGGTAATTTGGCAGCGGCTTTTGACATGTTCGCTGTTCCCCCTGCGA
CGGTGCCTCGACACGGTGCGCCGGGAGTTCGCTCGCTTGTGCTGCGGCCT
CATGGAGAACTACCTAGCGCCTGACTTGGTCGAACACCTCGCGGGAATCT
CCGAGGAGGCGGTAATTTGGCAGCGGCTTTTGACATGTTCGCTGTTCCCC
CTGCGACGGTGCCTCGACACGGTGCGCCGGGAGTTCGCTCGCTTGTGCTG
CGGCCTCATGGAGAACTACCTAGCGCCTGACTTGGTCGAACACCTCGCGG
GAATCTCCGAGGAGCGGCCGCAGGTGTCGCAGACGATCACCATCGGCTCC
AGCTTCTCCTGCTCCACCCCTAGATCCTCGTCGTCCACCTCCATGTCCGG
CGGCATGTGGACGCCATCGAGGGTCACCAAGGCGGGAGGGCTAGGGAGGG
GGTCCAACCCGCTCGACTCGTTCTTCCCCTTCGATCCGTACCTGCTCAGG
AGGTCGCACGCTTACGTCGCCGGCATGTACAACTCGTGGAAGCGGCCGCA
GGTGTCGCAGACGATCACCATCGGCTCCAGCTTCTCCTGCTCCACCCCTA
GATCCTCGTCGTCCACCTCCATGTCCGGCGGCATGTGGACGCCATCGAGG
GTCACCAAGGCGGGAGGGCTAGGGAGGGGGTCCAACCCGCTCGACTCGTT
CTTCCCCTTCGATCCGTACCTGCTCAGGAGGTCGCACGCTTACGTCGCCG
GCATGTACAACTCGTGGAAGGCCCAGGACGACAACCCCTCCCGGCGAGGA
AGATATCGTCGGCGAAACAAGACCAAGACACGGTCGAACGGCAGACACGG
CCGCGGCACCAGCGCCGACGCCGAAGACCTCTCCGACGGCAACGCAGGCT
CGTCTTCTTTGATCAGCGACAGCGACAGCGACAGCGACGACGACTCCTCC
GAAGACGACGCGGCCTCGGACGCCATGGACGCCAGCTCCCTCAGCTTCCG
GGACGGTGCAAGCGGGGGCATGCTGGCGCGGTCCAGACGGCGGCGCGCGG
AAAAAAAGGCAGAGAGGAAGGAGATGAAGGACACGCACAAGAGGCTCGCC
GGGCTCGGCGGCAGGGGCAGGCGAGGAGGGGGCGGCGAACGCTCCGGGTG
CGGCGCGAGTTCTTCGGAAGAGGATGACGAAGAATCTCGGCATATGTCGA
GAAAGATGGCCGACACTTACCTCACTGAGAGCATGGGCATGTCCGTGACC
CCCGGCAGCTCCGTGGCGTGCGGCAGCCTCATGGGGAGGAGTCTCGGGCA
CGCCATGTCTTCGTCCTTTGCGGACGACGGGCTGGTGTGGGCCCAGGACG
ACAACCCCTCCCGGCGAGGAAGATATCGTCGGCGAAACAAGACCAAGACA
CGGTCGAACGGCAGACACGGCCGCGGCACCAGCGCCGACGCCGAAGACCT
CTCCGACGGCAACGCAGGCTCGTCTTCTTTGATCAGCGACAGCGACAGCG
ACAGCGACGACGACTCCTCCGAAGACGACGCGGCCTCGGACGCCATGGAC
GCCAGCTCCCTCAGCTTCCGGGACGGTGCAAGCGGGGGCATGCTGGCGCG
GTCCAGACGGCGGCGCGCGGAAAAAAAGGCAGAGAGGAAGGAGATGAAGG
ACACGCACAAGAGGCTCGCCGGGCTCGGCGGCAGGGGCAGGCGAGGAGGG
GGCGGCGAACGCTCCGGGTGCGGCGCGAGTTCTTCGGAAGAGGATGACGA
AGAATCTCGGCATATGTCGAGAAAGATGGCCGACACTTACCTCACTGAGA
GCATGGGCATGTCCGTGACCCCCGGCAGCTCCGTGGCGTGCGGCAGCCTC
ATGGGGAGGAGTCTCGGGCACGCCATGTCTTCGTCCTTTGCGGACGACGG
GCTGGTGTGG
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