prot_C-linearis_contig111.1494.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1494.1
Unique Nameprot_C-linearis_contig111.1494.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length282
Homology
BLAST of mRNA_C-linearis_contig111.1494.1 vs. uniprot
Match: A0A6H5J616_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J616_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 2.580e-131
Identity = 203/281 (72.24%), Postives = 221/281 (78.65%), Query Frame = 0
Query:   13 VTVAALSLGGFGVDSFLV-----GSASRAPGVGTFDRLSSSTGQQQQREPGCRSSVL-------VARMSATEEISPFPYEDVLPFLKEHVQPSDQMLVLGCGTELPLQLSRDGYGTRRDTMPRSLMRCIDSDPGLISAMKAAAEADPVCSKHIASGNLVFEALNVTGGMPELKQSSVDCVVDAGLLDKLVTSEGIDAAKACSDAAHRAVRLGNPLVALSMIDKDDFSQIFDGNWGWMQELDGDPGAVSQWYRDKNVNLKDTGNNFVELGISFFVYTNVDNC 281
            V +AALSLGG GVDSFLV     G +S A      ++                           V RM+AT EI  FPYEDVLPFLKEHVQPSDQML+LGCGTELPLQLSRDGYGTR     RS MRCIDSDP LI+AMK AAEADPVCSK++A+G L+FEAL+V GGMPEL QSS DCV+DAGLLDKL+T+EG+DAAKACSDAAHRAVRLGNPLVALSMI+KDDF+QIFDGNWGWMQELDGDPGAVSQWYRDK VNLKD GNNFVELGISFFVYTNVDNC
Sbjct:   11 VAMAALSLGGVGVDSFLVPQQRFGGSSCARSCLRVEQXXXXXXXXXXXXXXXXXXXXXXXXXXSVTRMAATAEIGSFPYEDVLPFLKEHVQPSDQMLLLGCGTELPLQLSRDGYGTRDG---RSFMRCIDSDPDLIAAMKNAAEADPVCSKNMAAGKLIFEALDVAGGMPELTQSSADCVIDAGLLDKLITTEGLDAAKACSDAAHRAVRLGNPLVALSMINKDDFAQIFDGNWGWMQELDGDPGAVSQWYRDKKVNLKDVGNNFVELGISFFVYTNVDNC 288          
BLAST of mRNA_C-linearis_contig111.1494.1 vs. uniprot
Match: A0A835Z3E3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E3_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.510e-66
Identity = 114/222 (51.35%), Postives = 150/222 (67.57%), Query Frame = 0
Query:   61 SSVLVARMSATEEISPFPYEDVLPFLKEHVQPSDQMLVLGCGTELPLQLSRDGYGTRRDTMPRSLMRCIDSDPGLISAMKAAAEADPVCSKHIASGNLVFEALNVTGGMPELKQSSVDCVVDAGLLDKLVTSEGIDAAKACSDAAHRAVRLGNPLVALSM-IDKDDFSQIFDGNWGWMQELDGDPGAVSQWYRDKNVNLKDTGNNFVELGISFFVYTNVDNC 281
            S+ +V    A+E ++ FPY+ VLPFLKEHVQPSDQ+L+LG    LPL LS DGYGTR DT  RS +  +DSD   + A + AA  +P  + ++A+G L FE       M +L+QS VD V+D G++D L+++ G  AA    DA HRAVRLGNPL+ LS   DKD F   F+  +GW+QELDGDPGAVS W+RD+ +N+K   N+F  LG+  +VYTNVDNC
Sbjct:   62 SAAMVMEAVASEGLAAFPYDSVLPFLKEHVQPSDQLLILGARNTLPLLLSADGYGTR-DT--RSFVLVVDSDAVALEAAQKAAALNPATAANLAAGQLRFELKEDLTAMDDLEQSCVDAVLDNGMIDWLLSTGGEAAAGGMIDAVHRAVRLGNPLICLSSGTDKDTFCSPFESRFGWVQELDGDPGAVSMWHRDQKINMKGVANDFAALGLKMYVYTNVDNC 280          
BLAST of mRNA_C-linearis_contig111.1494.1 vs. uniprot
Match: A0A7S2Y0F7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F7_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.420e-44
Identity = 87/228 (38.16%), Postives = 128/228 (56.14%), Query Frame = 0
Query:   57 PGCRSSVLVARMSATEEISPFPYEDVLPFLKEHVQPSDQMLVLGCGTELPLQLSRDGYGTRRDTMPRSLMRCIDSDPGLISAMKAAAEADPVCSKHIASGNLVFEALNVTGGMPELKQSSVDCVVDAGLLDKLVTSEGIDAAKACSDAAHRAVRLGNPLVALSMIDKDDFSQIFDGNWGWMQELDGDPGAVSQWYRDKNVNL---KDTGNNFVELGISFFVYTNVDNC 281
            P    ++     S+T   +   Y+  LPFLKEH+   DQ+L+ G G  L ++L  DGYG       +  + CID D   +       E  P   K + SG + FE    T    +L+QS VD VVD   +D+L    G +A     +AAH+AVRLGNPL++LS +D++ ++  F   +GW++ELDGDP AVS WYRD+  N    K+  ++FV+ G+  +VY+N+DNC
Sbjct:   39 PSSNKALKTKIFSSTLTEADLDYDAALPFLKEHLTKHDQLLIFGTGDGLAIRLLEDGYGLEG----KGDVICIDYDEEKVKTAITTVEGIPALKKDMDSGKIRFECDPFTS-FDKLEQSCVDAVVDFAAIDRLYDERGEEAVSDIIEAAHKAVRLGNPLISLSKLDQETYTSFFGSKFGWVEELDGDPTAVSMWYRDQGTNSNVGKNDASDFVQRGLKLYVYSNLDNC 261          
BLAST of mRNA_C-linearis_contig111.1494.1 vs. uniprot
Match: A0A7S0SVS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVS2_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.400e-41
Identity = 84/206 (40.78%), Postives = 122/206 (59.22%), Query Frame = 0
Query:   78 PYEDVLPFLKEHVQPSDQMLVLGCGTELPLQLSRDGYGTRRDTMPRSLMRCIDSDPGLISAMKAAAEADPVCSKHIASGNLVFEALNVTGGMPELKQSSVDCVVDAGLLDKLVTSEGIDAAKACS---DAAHRAVRLGNPLVALSMIDKDDFSQIFDGNWGWMQELDGDPGAVSQWYRDKNVNLKDTGNNFVELGISFFVYTNVDN 280
            PY D++PFL EH+Q SDQ+L LG  T++ L L +DGYGT+        +  ID++  L++ +      D    K++ +  L    ++ +      KQS+ D +VD GLLD ++ S+  D  K      D    AVRLGN L+ LS IDK+ F + F+  +GW+QELDGDPG +SQWYR K  N++ T +NF + G+  +VYTN DN
Sbjct:   33 PYSDIIPFLSEHIQLSDQILFLGASTDMSLSLLKDGYGTKLT----GRLTVIDNNNALVNDLNKVVSNDIDLKKYLGN-RLSIHKVDESNLSSICKQSTFDSIVDYGLLDSILLSDKPDKYKTFLNYIDNLQNAVRLGNILICLSTIDKEIFCKPFEERFGWVQELDGDPGEISQWYRGKT-NIQATASNFKKHGLKMYVYTNTDN 232          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J616_9PHAE2.580e-13172.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z3E3_9STRA1.510e-6651.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2Y0F7_9STRA1.420e-4438.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0SVS2_9STRA3.400e-4140.78Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 66..243
e-value: 1.5E-11
score: 45.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:258887..262046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1494.1mRNA_C-linearis_contig111.1494.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 258149..262075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1494.1 ID=prot_C-linearis_contig111.1494.1|Name=mRNA_C-linearis_contig111.1494.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=282bp
MASALGGMGRWGVTVAALSLGGFGVDSFLVGSASRAPGVGTFDRLSSSTG
QQQQREPGCRSSVLVARMSATEEISPFPYEDVLPFLKEHVQPSDQMLVLG
CGTELPLQLSRDGYGTRRDTMPRSLMRCIDSDPGLISAMKAAAEADPVCS
KHIASGNLVFEALNVTGGMPELKQSSVDCVVDAGLLDKLVTSEGIDAAKA
CSDAAHRAVRLGNPLVALSMIDKDDFSQIFDGNWGWMQELDGDPGAVSQW
YRDKNVNLKDTGNNFVELGISFFVYTNVDNC*
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