prot_C-linearis_contig111.1491.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1491.1
Unique Nameprot_C-linearis_contig111.1491.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length261
Homology
BLAST of mRNA_C-linearis_contig111.1491.1 vs. uniprot
Match: A0A6H5JS60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS60_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 4.000e-116
Identity = 189/262 (72.14%), Postives = 214/262 (81.68%), Query Frame = 0
Query:   12 VLITFTGVQGFYGSGLLPG--------RTGLRSAADQSTARCSAQE--APSMTMSEGSSRGDFMKSVVGGGALGLAAVFSPALSKPAAAAAQSLEDLEADIMLCKEIFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDSLIVQANDIVDDVDT---LEKAFDMAQEVDALFTNFDASVYTIIFIPADAAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLVPAKRASLPKFLFKENAAIMREKVAIS 260
            +L+   G QGF G G LPG          G  SAA     RC A++   PSM ++ GSSRG+++K+V+GGGALGLA  FSPALSK A AAAQSLE+LEADIM+CKE+FKP LQYLKAEQFDAARTNTNYI+R  N+KKKIDS IVQA+D+VDD DT   +EKAFDMAQEV+ALFTNFD+SVYTIIFIPADA GVLPPGAEKYLKQAYGFYDDINKVLDFYI LVPPETKAAAEKL+PAKRA LP FLFKE + +M+EKVAIS
Sbjct:   10 MLMLVMGAQGFAGPGFLPGLCLGNAESAAGSTSAAASVAGRCPARQHVLPSMLLA-GSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTASFIEKAFDMAQEVEALFTNFDSSVYTIIFIPADAEGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKVAIS 270          
BLAST of mRNA_C-linearis_contig111.1491.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 4.490e-109
Identity = 186/258 (72.09%), Postives = 212/258 (82.17%), Query Frame = 0
Query:   12 VLITFTGVQGFYGSGLLPG-RTG--------LRSAADQSTARCSAQEA--PSMTMSEGSSRGDFMKSVVGGGALGLAAVFSPALSKPAAAAAQSLEDLEADIMLCKEIFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDSLIVQANDIVDDVDTLEKAFDMAQEVDALFTNFDASVYTIIFIPADAAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLVPAKRASLPKFLFKENAAIMREKVA 258
            +L+   G QGF G G LPG R G          SAA     RC A +   PSM+++ GSSRG+++K+V+GGGALGLA  FSPALSK A AAAQSLE+LEADIM+CKE+FKP LQYLKAEQFDAARTNTNYI+R  N+KKKIDS IVQA+D+V+D DT+EKAFDMAQEV+ALFTNFD+SVYTIIFIPADA GVLPPGAEKYLKQAYGFYDDINKVLDFYI LVPPETKAAAEKL+PAKRA LP FLFKE + +M+EK A
Sbjct:   11 MLMLVMGAQGFAGPGFLPGVRPGHAESAGAVSTSAAASVAGRCPAPQRVLPSMSLA-GSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFKEKSTLMKEKCA 267          
BLAST of mRNA_C-linearis_contig111.1491.1 vs. uniprot
Match: A0A835YWX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.630e-40
Identity = 80/195 (41.03%), Postives = 115/195 (58.97%), Query Frame = 0
Query:   60 SRGDFMKSVVGGGALGLAAVFSPALSKPAAAAAQSLEDLEADIMLCKEIFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDSLIVQANDIVDDVDTLEKAFDMAQEVDALFTNFDASVYTIIFIPADAAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLVPAKRASLPKFLFKENAAIMR 254
            SR  F  SVV GGA      ++      AAA  Q+ ED  A +M+CK + +P+ +Y K  QFD+ARTN NYI+R + ++K I  +I++   I DD   +E+A D+A   D+ F+N+D+S+YT+IFIP    G LP G++KY  QA  +YD    +LD +I L P + +  A     A+   LP+FLFKE  A  R
Sbjct:    7 SRRSFTSSVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKEFTAAGR 201          
BLAST of mRNA_C-linearis_contig111.1491.1 vs. uniprot
Match: A0A7S0BNM4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNM4_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 1.100e-15
Identity = 54/148 (36.49%), Postives = 84/148 (56.76%), Query Frame = 0
Query:   84 LSKPAAAAAQSLEDLEA-DIMLCKEIFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDSLIVQANDIVDDVDTLEKAFDMAQEVDALFTNFDASVYTIIFIPADAAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAA 230
            +S PAAA   S  D     I  C+ + +P  +Y++  ++D ARTN NY +R + +K  +       ++I+DD   LE   ++  E++ +FT  DASVYT IFIP+D    + P  EKY KQA+ +Y+   ++L  Y+ LVP + K  A
Sbjct:   52 ISGPAAATKMSPIDTSLLRICECERVMRPVRKYIEKGEWDRARTNINYCTRNLRLKTNMKVF----SEIMDD--PLE-GIEIMAELENVFTQMDASVYTPIFIPSDEG--ISPEQEKYQKQAFLYYEQAMRMLGDYLALVPQDKKVGA 190          
BLAST of mRNA_C-linearis_contig111.1491.1 vs. uniprot
Match: A0A0G4FXH9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FXH9_VITBC)

HSP 1 Score: 77.0 bits (188), Expect = 2.130e-13
Identity = 49/146 (33.56%), Postives = 84/146 (57.53%), Query Frame = 0
Query:  100 ADIMLCKEIFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDSLIVQANDIVDDVDTLEKAFDMAQEVDALFTNFDASVYTIIFIPADAAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLVPAKRASLPKFL 245
            A + +C+    P   Y+   Q+D AR+N NY +RV+    +++S++ + ++ +D+V+ LE A D+   +    ++ D+S+YT IF    A+G     A KY K+ Y +YD+   +LD +I L+P E  A + +L  A+   LPKFL
Sbjct:   57 ATVFVCRRAMDPVKGYIAEGQWDRARSNVNYCTRVL----RLNSVLKKVSNDIDEVEGLEIAGDLLNTM----SDLDSSIYTPIFAFDTASGTQRSFA-KYQKECYRYYDESVALLDRFIQLLPSELLAESSQLADAR--PLPKFL 191          
BLAST of mRNA_C-linearis_contig111.1491.1 vs. uniprot
Match: A0A2V3IGD1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGD1_9FLOR)

HSP 1 Score: 58.5 bits (140), Expect = 2.670e-7
Identity = 39/128 (30.47%), Postives = 65/128 (50.78%), Query Frame = 0
Query:  111 PALQYLKAEQFDAARTNTNYISRVINIKKKIDSLIVQANDIVDDVDTLEKAFDMAQEVDALFTNFDASVYTIIFIPADAAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPET-KAAAEKLVPAK 237
            P  +Y+    +D  RTN NY +R++ ++K +  +  Q +      D    A D+  ++D   T  DAS+YT +FIPAD  GV    A KY +QA  +Y +    ++ ++  +P +  + A  K   AK
Sbjct:    3 PVRRYIDEGAWDKGRTNVNYCTRMLALRKNMKKVAEQLSG-----DDYYDALDITADLDNTMTQLDASLYTPLFIPADD-GVSVEQA-KYQRQASEYYSNALDYIESFLSKLPTDVLERAQSKAATAK 123          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JS60_9PHAE4.000e-11672.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL66_ECTSI4.490e-10972.09TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YWX6_9STRA2.630e-4041.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0BNM4_9RHOD1.100e-1536.49Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0G4FXH9_VITBC2.130e-1333.56Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A2V3IGD1_9FLOR2.670e-730.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.647
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:177033..180578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1491.1mRNA_C-linearis_contig111.1491.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 176447..180605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1491.1 ID=prot_C-linearis_contig111.1491.1|Name=mRNA_C-linearis_contig111.1491.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=261bp
MRPSRTAVASMVLITFTGVQGFYGSGLLPGRTGLRSAADQSTARCSAQEA
PSMTMSEGSSRGDFMKSVVGGGALGLAAVFSPALSKPAAAAAQSLEDLEA
DIMLCKEIFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDSLIVQAND
IVDDVDTLEKAFDMAQEVDALFTNFDASVYTIIFIPADAAGVLPPGAEKY
LKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLVPAKRASLPKFLFKENA
AIMREKVAIS*
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