prot_C-linearis_contig110.1453.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig110.1453.1
Unique Nameprot_C-linearis_contig110.1453.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length106
Homology
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 4.410e-56
Identity = 93/103 (90.29%), Postives = 99/103 (96.12%), Query Frame = 0
Query:    2 RAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            RAQL+DG  LAGDASFKYAKVIRLS GADGTRARPV+GIFTIMNEYDQVVFSKAM TASVHDLKNDLKMMFVKRFLGHGFKLPV+FY+DECC+DRQLLLTMF+
Sbjct:  254 RAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFK 356          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.820e-48
Identity = 78/97 (80.41%), Postives = 91/97 (93.81%), Query Frame = 0
Query:    8 GRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            G +  GDASFKYAKVIRL+TG DGTRARPVY IFTIMNEY+QV+FSK M+TASV+DLKNDLKM+FVKRF+GHGFKLPV+FY+D+CCEDRQLLL+MF+
Sbjct:   10 GHVKTGDASFKYAKVIRLATGEDGTRARPVYEIFTIMNEYNQVIFSKVMSTASVYDLKNDLKMLFVKRFVGHGFKLPVIFYSDDCCEDRQLLLSMFK 106          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 2.080e-47
Identity = 78/90 (86.67%), Postives = 85/90 (94.44%), Query Frame = 0
Query:    2 RAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDE 91
            RAQL+DGRLLAGDASFKYAKVIRL TG DGTRARPVYGIFTIMNEYDQVVFSKAM TASVHDLK+DLKMMFV+RF+GHGFKLPV+ +T +
Sbjct:   49 RAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKSDLKMMFVQRFVGHGFKLPVILFTVD 138          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: A0A6H5K4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D4_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 6.140e-40
Identity = 71/87 (81.61%), Postives = 79/87 (90.80%), Query Frame = 0
Query:   18 KYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            KYAKVIRL+TG DGTRA PVYGIFTIMNEYDQVVFSKAM+TASV+DLKND KM+FVK  +GHGF LPV+FY+D CCEDRQLLL MF+
Sbjct:  382 KYAKVIRLATGEDGTRALPVYGIFTIMNEYDQVVFSKAMSTASVYDLKNDPKMLFVKCVVGHGFTLPVIFYSDGCCEDRQLLLWMFK 468          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: D7FVB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.160e-30
Identity = 52/98 (53.06%), Postives = 75/98 (76.53%), Query Frame = 0
Query:    7 DGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            DG +L GDASFK+AK+IRL   A   R+RPVYG+FT+ NEY+QVV+ + M T ++ +L  +LK+ F+ RF+ +GFK+P ++ TD+CC+DRQLL  +FR
Sbjct:  117 DGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKLFFM-RFVRNGFKVPTLWNTDDCCDDRQLLQRVFR 213          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 4.190e-26
Identity = 50/98 (51.02%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    7 DGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            DG +L+GDASFK+AK+IRL   A   R++PVYG+FT+ NEY+QVV+ + M T ++ +L  +LK  F  RF+ +GFK+  ++ TD+CC+DRQLL  +FR
Sbjct:  350 DGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKPFF-NRFVRNGFKVFTLWNTDDCCDDRQLLQRVFR 446          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: A0A6H5JMD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD0_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 7.420e-26
Identity = 50/98 (51.02%), Postives = 70/98 (71.43%), Query Frame = 0
Query:    7 DGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            DG +L GDASFK+AK+IRL   A   R RPVYG FT+ NE +QVV+ + M T ++ +L  +LK  F+ RF+ +GFK+P ++ TD+CC+D QLL  +FR
Sbjct:  268 DGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNECEQVVWQRPMKTGALSELAGELKQFFM-RFVRNGFKVPTLWNTDDCCDDSQLLQRIFR 364          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: A0A6H5KYH3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH3_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.090e-25
Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    7 DGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            DG +L GDASFK+AK+IRL   A   R RPVYG FT+ +EY+QVV+ + M T ++ +L  +LK+ F+ RF+ +GFK+P ++ TD+CC+D QLL  + R
Sbjct:   80 DGDILGGDASFKFAKIIRLRAKAGEERTRPVYGSFTVFDEYEQVVWQRPMKTGALSELAEELKLFFM-RFVRNGFKVPTLWNTDDCCDDLQLLQRILR 176          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.210e-25
Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 0
Query:    7 DGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            DG +L GDASFK+AK+IRL   A   R RPVYG FT+ NE +QVV+ + M T ++ +L  +LK++F+ RF+ + FK+P ++ T +CC+DRQLL  + R
Sbjct:  184 DGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNECEQVVWQRLMKTGALSELAEELKLLFM-RFVRNDFKVPTLWNTHDCCDDRQLLQRILR 280          
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.180e-20
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 0
Query:    7 DGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFR 104
            DG +L GDASFK+AK+IRL   A   R RPVYG FT+ NEY+Q                     +F  RF+ +GFK+P ++ TD+CC+DRQLL  +FR
Sbjct:  290 DGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNEYEQ---------------------LFFMRFVRNGFKVPTLWNTDDCCDDRQLLQRIFR 366          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIV2_ECTSI4.410e-5690.293'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JYR4_9PHAE1.820e-4880.413'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JCK3_9PHAE2.080e-4786.673'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K4D4_9PHAE6.140e-4081.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVB4_ECTSI1.160e-3053.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQG2_9PHAE4.190e-2651.023'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JMD0_9PHAE7.420e-2651.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYH3_9PHAE1.090e-2550.003'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K4A9_9PHAE1.210e-2548.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX0_9PHAE2.180e-2045.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig110contigC-linearis_contig110:188974..189569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig110.1453.1mRNA_C-linearis_contig110.1453.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig110 188307..189569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig110.1453.1 ID=prot_C-linearis_contig110.1453.1|Name=mRNA_C-linearis_contig110.1453.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=106bp
MRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQV
VFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLL
TMFRR*
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