prot_C-linearis_contig110.1452.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig110.1452.1
Unique Nameprot_C-linearis_contig110.1452.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1236
Homology
BLAST of mRNA_C-linearis_contig110.1452.1 vs. uniprot
Match: D8LEM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM5_ECTSI)

HSP 1 Score: 961 bits (2483), Expect = 0.000e+0
Identity = 715/1274 (56.12%), Postives = 766/1274 (60.13%), Query Frame = 0
Query:    1 MPPTLT-DGEGQHKNSRKIKRLRDASCMRKRETKQDRWGRQRGGRKTRWDKLNRQPSALKSRLRLVNSAAAGRG----------VDNQARLDAFEEAFAFVDAASITAAVXXXXXXXXXXXXXXXXXXXXSSGGAHAGGDPDADLRNGGAAGTTAVGITSREGDGVRVDGD----AVAESDVRPLSPDRLAPQERNDL--------PPASPTPAT-SSGGDXXXXXXXXXXXXXXXXXXXXXXXXSSAGTGIRGSFHGRGXXXXXXXXXXXXXXXXXXXXXXXXXSAGRCSSLRSPGGLSRXXXXXXXXXXXXXXXXXXXXXXXXLHRRLSSPAGTGSVKKNQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLFESVFKDKLPSLTPRKAPPATPRLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVXXXXXXXXXXXXX-VDESWIKTGINLTLFNSKAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLPTLRALAHASHDHLMRTRELEDWAARTGVDIGEAAAAAVADGISEHSGGXXXGLGGRVRVTGRDQSQTLGELLLFVLETFPRFFLGMAPPDEAGWQQQ-VMEQGGFEAGFSVDGGGNGYGEGF---APTTEGGAGGSGFNNQENWDGDGALQQ------QAEADAMAGFVPPNAADSLDSSM---DPPFGPSLDAAAAAAKQCRSPTPTPGGDTKNTGHPTGGEGAVIGSPGDGGPVGGRA-IANSPVSIGGDPALVSGRSAPAWPSLVMSSPSXXXXXXXXXXXXXXXXXXQQPGAGNEQEPPWSPAWATAGVRILEENPPEVSGGGEQAGRAVHGGVXXXXXXGVWDQGMASKDLVWGASGAAAAGQLESDADGDTPATPDAGASAARALRFTTQGEGDSSDAAATPSAVVEGGAGASGAAGDLFGAERDLSRESPNGAPAAAAATGPPLLLVGGESEARGLGLDEWPTAEESKSSTPEKRSTTPGPAEASRDAPTSSMAAEVAAGEGQDAVAQEQRPPLPATPTGXXYAAAAGAPGVPMPDIDFSSAALKEATRSLCNLYASHGAPAAGAEAAAAADAPERLQPLAVAGSTLCNLWPPSSALLLRRLLGTWPTGSARREVAYLRLVAGVACASPPLGVVCPGSRVPLMLFRRLAKCINSANTKVAQEAVFLVQADFILMAYLAPDRRLMDLVTNALCANRAHWSLDVRNASDQTFDLMLDYL 1235
            MPPTL  DG+ Q KNSRKIKRLRDASCMR RET QDRWGRQRGGRK RWDK +RQPSA KSRLR  N AAA  G          VD  A LDA EEAFAFVDAA++ AA                       GGA A GD DA      A G  A  +   +G  V   GD    A A       SP R A Q             P A+  PA   +GG                          S   G+               XXXXXXX           S GR SSLRSPGGLSR                        LHRRLSSPAG GS KK Q+                                      XXXXXXXXXXXXX    SLFESVFKDKLPSLTPRKAPPATPRLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDV  XXXXXXXXXXX VDESWIKTGINLTLFNS+AVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRL TLRALAHASHDHLMRTRELEDWAAR GVDI EAAAAAVADGIS     XXX   GR RVTGRDQSQTLGELLLFVL+TFPRFFLGM P DEAG QQQ V   G   A FS DG G G  E     A   EG A   G +      G  A         QA      G   P++A+  ++     D   GP+  AAA    QC+S      G   N G   G EG ++GSPG           A +  S GGDPA  S R A AWPSL   SPS                   + G GN+QEPPWSPAWATAGVR +E+ P E     E AG AV+ G       GVW QGMASKDL W +        L  +  GD     D  A AARALRFT Q E    DA  T            G AG+   + R+ SRESP  A A AA  G P      ES A  LGLDEWPTA+E+KSSTPEK S    P E    A  S    +   G  Q+A  Q+   PLP+  TG     AAG  G+ + ++D  + ALKEATRSLCNLYASHGAPAAGAEAAA+ADAPERLQPLA+AGSTLC LWPPSSALLLRRLLGTWP GSARREVAYLRL+AGVACA+PPLGVVCPGSR+PLMLFRRLAKCINS+NTKVAQEA FLVQADFILM YLAPDRRLMDLVTNALCANR HWS DVRNASDQTFDLMLD+L
Sbjct:    1 MPPTLAEDGQQQRKNSRKIKRLRDASCMRTRETAQDRWGRQRGGRKARWDKWDRQPSAFKSRLRSGNFAAAAAGXXGVGLGGGVVDEDAVLDAAEEAFAFVDAATMKAAAAATAANAVLGSEGTSSDEGVG-GGAGAEGDSDA------ATGVPACSVAVVDGGRVTGGGDVPPEAAAGDGAHTPSPTRRALQRXXXXXXXXXXXXPAATAAPAVLDAGGCTDDAVAASPAPATTATVVSTPSSARSIANGVX--------------XXXXXXXGVSGSRSKTVGSGGRRSSLRSPGGLSRAGSKGSGVGGGLGSGSYRGSPPP-LHRRLSSPAGVGSGKKGQRQRQVGGSTAVGVGARGLGSAKKKKQASGSDAGRQGRAEXXXXXXXXXXXXX----SLFESVFKDKLPSLTPRKAPPATPRLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVDDXXXXXXXXXXXEVDESWIKTGINLTLFNSQAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLLTLRALAHASHDHLMRTRELEDWAARVGVDIAEAAAAAVADGISGXXXXXXXXXXGRARVTGRDQSQTLGELLLFVLQTFPRFFLGMVPVDEAGGQQQGVWHHGDPGATFSGDGSGYGCVEDCGVAAQAAEGCADVGGVDVHAGVCGGNASSSGFVSPSQAWGSNGPGIGSPSSAEITENRRAAGDQEDGPAAAAAADGGDQCKSGCD---GCDDNDGASLGEEGGLVGSPGXXXXXXXXXPTARNAASSGGDPAPASERCALAWPSLASGSPSPATGQRQ-----------NEEGVGNKQEPPWSPAWATAGVRSIEDVPLE-----EGAGLAVNRGSCGD---GVWGQGMASKDLAWESEAG-----LGEEVGGDLRTATDGVAGAARALRFTAQEEDVGGDAEVT------------GDAGNWLASGRECSRESPV-ASAGAALAGDPF-----ESGAGRLGLDEWPTAQEAKSSTPEKISAVE-PVERMDGASVSGSRGDATGG--QEAGTQQ---PLPSA-TGCT---AAGGGGLAL-ELDLPAVALKEATRSLCNLYASHGAPAAGAEAAASADAPERLQPLALAGSTLCQLWPPSSALLLRRLLGTWPAGSARREVAYLRLIAGVACAAPPLGVVCPGSRLPLMLFRRLAKCINSSNTKVAQEAAFLVQADFILMVYLAPDRRLMDLVTNALCANREHWSADVRNASDQTFDLMLDFL 1192          
BLAST of mRNA_C-linearis_contig110.1452.1 vs. uniprot
Match: A0A836CPM9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPM9_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.070e-39
Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 0
Query:  380 SVFKDKLPSLTPRK--------APPATPRLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWD--DVXXXXXXXXXXXXXVDESWIKTGINLTLFNSKAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLPTLRALA 531
            +VF   LPSLTP+         +  A P LSRDSIVHAIF++LFG+R+VR GPRE YGG WD  D              VDESWIK+ ++++LF+SKA+ FA  S  GADLL +YVD++AV RLV  LR +DPRVPSPRL I++AV+E+C HLRLP LRA A
Sbjct:  187 AVFGGTLPSLTPKTKTGHKRIGSAAAAPPLSRDSIVHAIFEALFGRRQVRRGPRESYGGAWDESDDDGDDPAADAPDAVVDESWIKSSMDVSLFSSKALQFAVSSVRGADLLSRYVDADAVSRLVDALRRDDPRVPSPRLAILRAVHEHCRHLRLPMLRAAA 348          
BLAST of mRNA_C-linearis_contig110.1452.1 vs. uniprot
Match: A0A2D4BM86_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM86_PYTIN)

HSP 1 Score: 87.0 bits (214), Expect = 1.240e-13
Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 0
Query: 1116 LLRRLLGTWPTGSARREVAYLRLVAGVACASPPLGVVCPGSRVPLMLFRRLAKCINSANTKVAQEAVFLVQADFILMAYLAPDRRLMDLVTNALCANR-AHWSLDVRNASDQTFDLMLDY 1234
            LLRRLL  WPT    +E+  +R++A V   SPPL  +     +P+ +F RLAKCI S +T+VAQEA+      F ++ +L     +  +++ A   N  +HW+  +R  S+  FD  LDY
Sbjct:  553 LLRRLLRCWPTRFPTQEIVAIRMIARVIMTSPPLHSIDGAEELPIQIFTRLAKCITSPHTQVAQEALAFTGCQFAMVHFLGEYEDIYKVISEAFHQNATSHWNEVIRTTSEGHFDRALDY 672          
BLAST of mRNA_C-linearis_contig110.1452.1 vs. uniprot
Match: K3WXG7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXG7_GLOUD)

HSP 1 Score: 85.9 bits (211), Expect = 3.010e-13
Identity = 48/128 (37.50%), Postives = 75/128 (58.59%), Query Frame = 0
Query: 1110 PPSSALLLRRLLGTWPTGSARREVAYLRLVAGVACASPPLGVVC--PGSRVPLMLFRRLAKCINSANTKVAQEAVFLVQADFILMAYLAPDRRLMDLVTNALCANRAH-WSLDVRNASDQTFDLMLDY 1234
            P  +  LL+RLL  WP+    +EV  +R+VA V  +SPPL  +   P + + + +F RLA+C+ S +T+VAQEA+      F+++ +LA    +  ++T A  AN  H W+  VR+ S+  FD  LDY
Sbjct:  582 PDVTVQLLQRLLANWPSKYPSQEVVAIRMVARVIMSSPPLHTMMNGPSANLHVKVFTRLARCVQSPHTQVAQEALAFTGCQFVMVHFLARYDDIYRVITEAFHANTVHHWNEAVRSTSEGHFDRALDY 709          
BLAST of mRNA_C-linearis_contig110.1452.1 vs. uniprot
Match: A0A812UKS3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UKS3_SYMMI)

HSP 1 Score: 59.7 bits (143), Expect = 1.960e-5
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 0
Query:  449 VDESWIKTGINLTLFNSKAVDFACRSTAGAD-------LLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLPTLRALAHASHDHLMRTRELEDWAARTGVDIGEAAAAAVAD 565
            VDESW    ++  L ++KA+ +A +    AD       LL +Y+  + +  L+  L FED RV SP + ++KAV  NCA LR      L   S+  L+R +    +A    +D   AA++ +AD
Sbjct:   19 VDESWFNKLVSTCLLSTKALQYALQKNIPADTSLPPNELLSEYLQQSFLTSLLDQLPFEDERVSSPIVSVLKAVCRNCACLRQFLADGLKQVSYLRLLRCKSSSRFAVHFEIDP-NAASSIIAD 141          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LEM5_ECTSI0.000e+056.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CPM9_9STRA6.070e-3955.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4BM86_PYTIN1.240e-1337.50Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WXG7_GLOUD3.010e-1337.50Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A812UKS3_SYMMI1.960e-533.06Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1101..1234
e-value: 7.6E-12
score: 46.9
IPR002554Protein phosphatase 2A, regulatory B subunit, B56PFAMPF01603B56coord: 1116..1231
e-value: 8.5E-11
score: 41.5
IPR002554Protein phosphatase 2A, regulatory B subunit, B56PANTHERPTHR10257SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT Bcoord: 1116..1233
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1096..1233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig110contigC-linearis_contig110:176361..183660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig110.1452.1mRNA_C-linearis_contig110.1452.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig110 176337..185753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig110.1452.1 ID=prot_C-linearis_contig110.1452.1|Name=mRNA_C-linearis_contig110.1452.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1236bp
MPPTLTDGEGQHKNSRKIKRLRDASCMRKRETKQDRWGRQRGGRKTRWDK
LNRQPSALKSRLRLVNSAAAGRGVDNQARLDAFEEAFAFVDAASITAAVA
AAAVTGVTSAGGGGGDSDGSSGGAHAGGDPDADLRNGGAAGTTAVGITSR
EGDGVRVDGDAVAESDVRPLSPDRLAPQERNDLPPASPTPATSSGGDGSV
SSVPVTPAAVALSTPATPKTPSSAGTGIRGSFHGRGSGSGSGSSSSSSSR
TKAGGGGGGGGSAGRCSSLRSPGGLSRASSIGGGGGGGGLGSGSYRGSPP
PLHRRLSSPAGTGSVKKNQKQRQAGAAGAGAARSGSGLGSVKKKKKQASA
SSGSGRHEKEAEQQEVEAATPPPPPSLFESVFKDKLPSLTPRKAPPATPR
LSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVDEDDEDDEDQEEEVD
ESWIKTGINLTLFNSKAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFE
DPRVPSPRLMIIKAVYENCAHLRLPTLRALAHASHDHLMRTRELEDWAAR
TGVDIGEAAAAAVADGISEHSGGGGGGLGGRVRVTGRDQSQTLGELLLFV
LETFPRFFLGMAPPDEAGWQQQVMEQGGFEAGFSVDGGGNGYGEGFAPTT
EGGAGGSGFNNQENWDGDGALQQQAEADAMAGFVPPNAADSLDSSMDPPF
GPSLDAAAAAAKQCRSPTPTPGGDTKNTGHPTGGEGAVIGSPGDGGPVGG
RAIANSPVSIGGDPALVSGRSAPAWPSLVMSSPSPAKQQQQQQQQQQQLE
LEQQPGAGNEQEPPWSPAWATAGVRILEENPPEVSGGGEQAGRAVHGGVG
GGGGGGVWDQGMASKDLVWGASGAAAAGQLESDADGDTPATPDAGASAAR
ALRFTTQGEGDSSDAAATPSAVVEGGAGASGAAGDLFGAERDLSRESPNG
APAAAAATGPPLLLVGGESEARGLGLDEWPTAEESKSSTPEKRSTTPGPA
EASRDAPTSSMAAEVAAGEGQDAVAQEQRPPLPATPTGTGYAAAAGAPGV
PMPDIDFSSAALKEATRSLCNLYASHGAPAAGAEAAAAADAPERLQPLAV
AGSTLCNLWPPSSALLLRRLLGTWPTGSARREVAYLRLVAGVACASPPLG
VVCPGSRVPLMLFRRLAKCINSANTKVAQEAVFLVQADFILMAYLAPDRR
LMDLVTNALCANRAHWSLDVRNASDQTFDLMLDYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR002554PP2A_B56
IPR016024ARM-type_fold