prot_C-linearis_contig110.1434.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig110.1434.1
Unique Nameprot_C-linearis_contig110.1434.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length215
Homology
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: D7G0V1_ECTSI (Transcription initiation factor TFIID n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0V1_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 4.280e-107
Identity = 163/208 (78.37%), Postives = 177/208 (85.10%), Query Frame = 0
Query:    6 GLAHPQAPVQVSPIVPQNNHQPQPQVRVVLQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYKEPE 213
            G AH  A    +   P  N   QP VRVVLQNVTAT+NMRIT+D SSLANK+R+AEYNPKKLPAVVMRIREPQATGL+F +GKVVITGA GVEAAREAA +FV VVE  GL P TNP  LRF VQNMVATFE+DAPISLELMAY +ARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTG K EDHLNEALV+LLPILNQY++P+
Sbjct:    6 GYAHAPAAQPAAAGNPPQNEPQQPVVRVVLQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGAAGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQPD 213          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: A0A7S3JUH6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUH6_9STRA)

HSP 1 Score: 177 bits (449), Expect = 5.340e-49
Identity = 90/179 (50.28%), Postives = 120/179 (67.04%), Query Frame = 0
Query:   32 RVVLQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYK 210
            R+V+QNV AT N+RI +D  +LA   RNAEYNPKK  AV+MR+REP+ TGL+F TGK+V TGA     +R  A KF  V++  G     NP+   FT+QNMVAT +++ PI LE + Y+ +++C YEPELFPG IY+      V  +F SGR+V+TGAK   HL  A  K+ P+L Q+K
Sbjct:   61 RIVIQNVVATANLRIAIDLKTLATSARNAEYNPKKFAAVIMRLREPRCTGLIFSTGKMVCTGAKSEHESRMGARKFAAVLDKIGW----NPKFTEFTIQNMVATADVNFPIRLEQLVYSHSKFCSYEPELFPGCIYRLVVPKTVILLFVSGRMVITGAKSVSHLQTAFDKIFPVLLQFK 235          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: F0YMS8_AURAN (Uncharacterized protein GTF n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMS8_AURAN)

HSP 1 Score: 169 bits (429), Expect = 8.260e-49
Identity = 89/176 (50.57%), Postives = 114/176 (64.77%), Query Frame = 0
Query:   35 LQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYK 210
            +QNV AT+N+RI++D  +LA   RNAEYNPKK  AV+MR+REP+ T LVF TGK+VITGA   +AAR  A KF  ++   G +P        F VQNMVAT +   PI LE + Y  A++  YEPELFPGLIY+      V  +F SGR+VLTG K   HL  A  K+ P+L ++K
Sbjct:   50 VQNVVATVNLRISIDLRTLALNARNAEYNPKKFAAVIMRVREPRCTALVFSTGKMVITGAKSEDAARRGARKFAAIIRKIGFQPKFG----EFKVQNMVATSDAGFPIRLEALVYAHAKFSSYEPELFPGLIYRLVIPKTVLLLFVSGRMVLTGGKSLGHLRTAFEKMYPVLTEFK 221          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: A9CTI1_ENTBH (Transcription initiation factor TFIID n=1 Tax=Enterocytozoon bieneusi (strain H348) TaxID=481877 RepID=A9CTI1_ENTBH)

HSP 1 Score: 163 bits (412), Expect = 9.310e-47
Identity = 81/177 (45.76%), Postives = 119/177 (67.23%), Query Frame = 0
Query:   34 VLQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYK 210
            +LQNV AT+N+   +D  S+A   RNAEYNPKK  AV+MRIREP+ T L+F +GK+V+TGA   +A+R A+ ++ K+++  G     +     FTVQN+V++ ++  PI LE +AY  + +C YEPELFPGLIY+     +V  +F SG++VLTGAK  + + EA   + P+L QY+
Sbjct:   59 ILQNVVATVNLNCKLDLKSIALHARNAEYNPKKFAAVIMRIREPKTTALIFASGKMVVTGAKSEKASRIASQRYSKIIQKLGFSVYFDS----FTVQNIVSSCDLKFPIKLEGLAYAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREDIFEAFENIYPVLTQYR 231          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: L2GNX2_VITCO (TATA-box-binding protein n=1 Tax=Vittaforma corneae (strain ATCC 50505) TaxID=993615 RepID=L2GNX2_VITCO)

HSP 1 Score: 159 bits (403), Expect = 7.320e-46
Identity = 80/190 (42.11%), Postives = 123/190 (64.74%), Query Frame = 0
Query:   21 PQNNHQPQPQVRVVLQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYK 210
            P+  H  +  +  VLQNV AT+N+   +D  S+A + RNAEYNPK+  AV+MRIR+P+ T L+F +GK+V+TGA   +A++ A+ ++ K++   G     N Q   F +QN+V++ ++   I LE +AY  + +C YEPELFPGLIY+     +V  +F SG++VLTGAK  + + EA   + P+L QY+
Sbjct:   10 PKQTHLQRTGITPVLQNVVATVNLNCKLDLRSIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEKASKMASQRYAKIISKLGF----NAQFTDFKIQNIVSSCDLKFCIKLEGLAYAHSNFCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREDIYEAFDNIYPVLTQYR 195          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: A0A7J7ISE2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISE2_9RHOD)

HSP 1 Score: 160 bits (405), Expect = 1.290e-45
Identity = 88/199 (44.22%), Postives = 125/199 (62.81%), Query Frame = 0
Query:   16 VSPIVPQNNHQPQPQVRVVLQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYKEPEN 214
            VS  V +    P   V V LQNV AT+N+   +D   +A + RNAEYNPK+  AV+MRIR+P+ T L+F TGKVVITGA   E AR AA K+ K+V   G +     +   F + N+VA+ ++  PI LE +A+  + +  YEPELFPGL+Y+     +   +F SG+VV+TGAK  D LN+A  KL P+L Q+++ ++
Sbjct:   24 VSSTVERFRRPPVADVEVKLQNVVATVNLVCPLDLRHIAMRARNAEYNPKRFAAVIMRIRDPKTTALIFSTGKVVITGARSEEDARLAARKYAKIVRKLGYEDV---KFADFGLHNLVASADVRFPIRLEALAHAHSNYAHYEPELFPGLVYRMLEPKLALLIFVSGKVVITGAKSRDDLNDAFQKLYPVLCQFRKADS 219          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: A0A507C8B1_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C8B1_9FUNG)

HSP 1 Score: 159 bits (403), Expect = 1.530e-45
Identity = 80/177 (45.20%), Postives = 118/177 (66.67%), Query Frame = 0
Query:   34 VLQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYK 210
            +LQN+ AT+N+   +D  ++A   RNAEYNPK+  AV+MRIREP+ T L+F +GK+V+TGA   E AR AA K+ ++++  G     N +   F +QN+V + ++  PI LE +A + + +  YEPELFPGLIY+     VV  +F SG+VVLTGAK  +H+ +A  K+ P+L+ YK
Sbjct:   48 ILQNIVATVNLEARLDLKNIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEEQARLAARKYARIIQKLGF----NAKFSDFKIQNIVGSCDVKFPIRLEGLASDHSAFANYEPELFPGLIYRMVDPKVVLLIFVSGKVVLTGAKTREHIYDAFEKIFPVLSMYK 220          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: UPI0010FB6E15 (TATA-box-binding protein-like n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB6E15)

HSP 1 Score: 159 bits (401), Expect = 1.700e-45
Identity = 82/194 (42.27%), Postives = 123/194 (63.40%), Query Frame = 0
Query:   17 SPIVPQNNHQPQPQVRVVLQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYK 210
            SP V     Q +  +  VLQNV AT+N+   +D  ++A + RNAEYNPK+  AV+MRIR+P+ T L+F +GK+VITGA   E++R AA K+ +++   G     N +   F +QN+V++ +    I LE +A+  + +C YEPELFPGLIY+     +V  +F SG++VLTGAK  D + +A   + P+L QY+
Sbjct:   11 SPCVGSEVQQQRSGITPVLQNVVATVNLNCKLDLKAIALRARNAEYNPKRFAAVIMRIRDPKTTSLIFASGKMVITGAKSEESSRIAAQKYARIIHKLGF----NTRFADFKIQNIVSSCDTKFSIRLEGLAFAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDEIYQAFENIYPVLTQYR 200          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: A0A0P9H129_RHOGW (Uncharacterized protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A0P9H129_RHOGW)

HSP 1 Score: 160 bits (404), Expect = 1.770e-45
Identity = 80/178 (44.94%), Postives = 116/178 (65.17%), Query Frame = 0
Query:   35 LQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYKEP 212
            LQN+ AT+N+   +D  ++A   RNAEYNPK+  AV+MRIREP+ T LVF +GKVV+TGA   + AR AA KF +++   G +         F +QN+V + ++  PI LE +AY    +  YEPELFPGLIY+     VV  +F SG++VLTGAK  + + +A  ++ P+LN+Y++P
Sbjct:   66 LQNIVATVNLECKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKVVVTGAKSEDDARLAARKFARIIMKLGFETKFTD----FKIQNIVGSCDVKFPIRLEGLAYGHGHFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKFREEIYQAFAQIYPVLNEYRKP 239          
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Match: A0A109FK61_9BASI (TBP-domain-containing protein n=3 Tax=Rhodotorula TaxID=5533 RepID=A0A109FK61_9BASI)

HSP 1 Score: 160 bits (405), Expect = 1.960e-45
Identity = 79/178 (44.38%), Postives = 117/178 (65.73%), Query Frame = 0
Query:   35 LQNVTATINMRITVDASSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAAREAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYNRARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALVKLLPILNQYKEP 212
            LQN+ AT+N+   +D  ++A   RNAEYNPK+  AV+MRIREP+ T LVF +GKVV+TGA   + +R AA K+ ++++  G +         F +QN+V + ++  PI LE +AY    +  YEPELFPGLIY+     VV  +F SG++VLTGAK  D + +A  ++ P+LN+Y++P
Sbjct:   82 LQNLVATVNLECKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKVVVTGAKSEDDSRLAARKYARIIQKLGFETKFTD----FKIQNIVGSCDVKFPIRLEGLAYGHGHFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKQRDEIYQAFAQIYPVLNEYRKP 255          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0V1_ECTSI4.280e-10778.37Transcription initiation factor TFIID n=2 Tax=Ecto... [more]
A0A7S3JUH6_9STRA5.340e-4950.28Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YMS8_AURAN8.260e-4950.57Uncharacterized protein GTF n=1 Tax=Aureococcus an... [more]
A9CTI1_ENTBH9.310e-4745.76Transcription initiation factor TFIID n=1 Tax=Ente... [more]
L2GNX2_VITCO7.320e-4642.11TATA-box-binding protein n=1 Tax=Vittaforma cornea... [more]
A0A7J7ISE2_9RHOD1.290e-4544.22Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A507C8B1_9FUNG1.530e-4545.20Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
UPI0010FB6E151.700e-4542.27TATA-box-binding protein-like n=1 Tax=Nylanderia f... [more]
A0A0P9H129_RHOGW1.770e-4544.94Uncharacterized protein n=1 Tax=Rhodotorula gramin... [more]
A0A109FK61_9BASI1.960e-4544.38TBP-domain-containing protein n=3 Tax=Rhodotorula ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 35..50
score: 33.51
coord: 78..96
score: 46.36
coord: 153..168
score: 66.36
coord: 59..78
score: 65.85
coord: 172..188
score: 48.56
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 35..112
e-value: 1.2E-24
score: 86.1
coord: 127..209
e-value: 2.0E-24
score: 85.3
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 16..211
IPR000814TATA-box binding proteinHAMAPMF_00408TATA_bind_prot_archcoord: 29..212
score: 24.965
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 36..209
e-value: 1.7E-57
score: 195.7
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 40..129
e-value: 1.7E-57
score: 195.7
NoneNo IPR availablePANTHERPTHR10126:SF6TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 16..211
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 123..210
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 30..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig110contigC-linearis_contig110:63493..66483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig110.1434.1mRNA_C-linearis_contig110.1434.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig110 62880..66551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig110.1434.1 ID=prot_C-linearis_contig110.1434.1|Name=mRNA_C-linearis_contig110.1434.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=215bp
MASLPGLAHPQAPVQVSPIVPQNNHQPQPQVRVVLQNVTATINMRITVDA
SSLANKVRNAEYNPKKLPAVVMRIREPQATGLVFPTGKVVITGATGVEAA
REAANKFVKVVEAFGLKPATNPQALRFTVQNMVATFEMDAPISLELMAYN
RARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGAKHEDHLNEALV
KLLPILNQYKEPEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf