prot_C-linearis_contig110.1429.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig110.1429.1
Unique Nameprot_C-linearis_contig110.1429.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length155
Homology
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BLAST of mRNA_C-linearis_contig110.1429.1 vs. uniprot
Match: A0A6H5KYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ6_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 4.460e-53
Identity = 106/156 (67.95%), Postives = 121/156 (77.56%), Query Frame = 0 
Query:    1 VATKPAGGRRRGFLHGKVAAASALMGLESLRVVPSGRMEEIFVGETVTVASADGR-RAARPHRLAQVVWVKDRSLLVPRVSPFLTTTDARIKSATSQRGGAPEGVWEVVDDNGGEEVAISRIFGRCDIVRFDQQGGARSPSSRQVFTGAGFIKRAG 155
            VATKPAGG RRGFLHGKVAAASALMG+ESL V PSGR E+IFVG+TV VASAD R   ARP+RLA+VVWV+D S LV RVSPFLT+ +ARI  A    G  P+ VWEVVD +GGEE+ ISRI GRCD+V   Q  GA S SS +VF+ AGFI+R G
Sbjct:  136 VATKPAGGLRRGFLHGKVAAASALMGVESLLVGPSGRQEKIFVGDTVLVASADERPEEARPYRLAEVVWVEDLSRLVSRVSPFLTSAEARITGA----GAPPDVVWEVVDGDGGEEIDISRIEGRCDVVPHVQGAGAGSSSSGRVFSAAGFIRRCG 287
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BLAST of mRNA_C-linearis_contig110.1429.1 vs. uniprot
Match: A0A6H5JF97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF97_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 8.220e-29
Identity = 69/152 (45.39%), Postives = 90/152 (59.21%), Query Frame = 0 
Query:    1 VATKPAGGRRRGFLHGKVAAASALMGLESLRVVPSGRMEEIFVGETVTVASADGRRAARPHRLAQVVWVKDRSLLVPRVSPFLTTTDARIKSATSQRGGAPEGVWEVVDDNGGEEVAISRIFGRCDIVRFDQQGGARSPSSRQVFTGAGFIK 152
            VAT P GG RRGFLHG++AA+SALM +ESLRV P G                       PHRLA V W ++   LV RV+PFLTT  A + +  +        VWEVV D+GGE V ++RI  RCD++   Q+ GA S S+R+++T AGFI+
Sbjct:  166 VATTPLGGLRRGFLHGRIAASSALMSIESLRVGPDGGXXXXXXXXXXXXXXXXXXXXQLPHRLAAVTWDEEEERLVARVNPFLTTEAALLNNPPAVEEERLPLVWEVVTDDGGERVDLTRITTRCDVIPLAQEAGAGS-SARRLYTCAGFIR 316
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYQ6_9PHAE4.460e-5367.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF97_9PHAE8.220e-2945.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig110contigC-linearis_contig110:16162..16626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig110.1429.1mRNA_C-linearis_contig110.1429.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig110 16162..16628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig110.1429.1 ID=prot_C-linearis_contig110.1429.1|Name=mRNA_C-linearis_contig110.1429.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=155bp
VATKPAGGRRRGFLHGKVAAASALMGLESLRVVPSGRMEEIFVGETVTVA
SADGRRAARPHRLAQVVWVKDRSLLVPRVSPFLTTTDARIKSATSQRGGA
PEGVWEVVDDNGGEEVAISRIFGRCDIVRFDQQGGARSPSSRQVFTGAGF
IKRAG
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