prot_C-linearis_contig11.1420.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1420.1
Unique Nameprot_C-linearis_contig11.1420.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length295
Homology
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: A0A6H5KVJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ1_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 7.610e-107
Identity = 169/206 (82.04%), Postives = 176/206 (85.44%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQGASMHLYVPRSAREELKALGPEFKKAYNFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKRSVGTTEEEDRVLSILKKR 206
            MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISS VDIE+RL SVLQGA MHL+VPRSAREELKALGPEF+KAYNFAIG CRGLP P N   A                 EKGPDP KEIIA IGA NEGKYLVASQDENLR RLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERK++VGTTEEEDRVL++LKKR
Sbjct:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSKVDIEKRLTSVLQGAKMHLFVPRSAREELKALGPEFQKAYNFAIGHCRGLPPPRNENQAGGAXXXXXXXXXXXXXGEKGPDPAKEIIAAIGADNEGKYLVASQDENLRMRLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLAVLKKR 206          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: D8LKG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG1_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 1.330e-55
Identity = 97/128 (75.78%), Postives = 101/128 (78.91%), Query Frame = 0
Query:   58 MHLYVPRSAREELKALGPEFKKAYNFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAE 185
            MHL+VPRSAREELKALGPEF+KAYNFAIG CRGLP P N   A                 EKGPDP KEI+A IGA NEGKYLVASQDENLR RLRR+PGCPLVFVSRTVLVMEQPSGKSKAEFEKAE
Sbjct:    1 MHLFVPRSAREELKALGPEFQKAYNFAIGHCRGLPPPRNENQAXXXXXXXXXXXXXXXXXEKGPDPAKEIVAAIGADNEGKYLVASQDENLRVRLRRIPGCPLVFVSRTVLVMEQPSGKSKAEFEKAE 128          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: A0A836CFL8_9STRA (Fcf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL8_9STRA)

HSP 1 Score: 182 bits (461), Expect = 5.140e-53
Identity = 102/207 (49.28%), Postives = 138/207 (66.67%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQGASMHLYVPRSAREELKALGPEFKKAYNFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKRSVGTTEEEDRVLSILKKRE 207
            MR+TRAKQYRR LRFFRIVYG+ APYKV+LDGNFIH C++  V++ +R+ +VLQG    L VP++A +EL+ALG +F+ A  FA   C+ +     H P             G+G+      P ++I A I + N  +Y+VASQDE LRA+LR V GCPL+++S+TVL+MEQ SGK+KA FE  ER R  G TEEE  ++  L++ E
Sbjct:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTIT---EHAP-------------GKGS------PAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALER-RKTGVTEEETAIVEQLRQEE 184          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: W7T2Y0_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.400e-30
Identity = 78/198 (39.39%), Postives = 113/198 (57.07%), Query Frame = 0
Query:   10 RRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQGASMHLYVPRSAREELKALGPEFKKAYNFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKRSVGTTEEEDRVLSILKKRE 207
            R+ LRF+RIVYGI+ PYK+++DGNFIH  +   +DI  RL  +L   ++  Y P++  +EL A+GP+F+ A+ +    C  +P P   T      D+ G      GAA         I   +G  N  KY+VA+QD+ L+ARLR VP   L+FVSR V +ME PS  S+    K E ++    TEEE  +L+ L+ +E
Sbjct:    2 RKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKT----NHDDSGKNYVSAGAA---------ICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKE 186          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: A0A7S2B5Q5_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5Q5_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.000e-30
Identity = 76/204 (37.25%), Postives = 104/204 (50.98%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQGASMHLYVPRSAREELKALGPEFKKAYNFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKRSVGTTEEEDRVLSILK 204
            MR+ R K+ R+ L FFR+ +GIS PY+V+LDGNFIH C S  +DI  RL   L G    LYVP     EL+ LG   K A  FA+  C  +      + +A                         I+  IG  N   YLVASQDE+LR  LR +PG PL+F+ RTVL++E     SK    + E K+ V    +E + + +++
Sbjct:    1 MRLLRGKKARKTLAFFRLNFGISPPYRVLLDGNFIHECTSYKIDILARLGKQLGGEKFMLYVPSCVISELEMLGTNMKPALTFALENCEVVACDSAESCSAG------------------------ILGLIGEKNAEGYLVASQDEDLRCELRAIPGVPLMFIKRTVLILESTGHASKTATVQMETKK-VAVVGDESKAMGLVR 179          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: W4H7D3_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7D3_9STRA)

HSP 1 Score: 108 bits (271), Expect = 7.890e-25
Identity = 70/174 (40.23%), Postives = 95/174 (54.60%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQGASMHLYVPRSAREELKALGPEFKKAYNFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPS 174
            MR  RAK  R+ LR F+ + GI  PYKV+LDGNFI  CI  +VDI  RL S LQ      +V R+  +ELK L  +      +                A+A    EGG+D          D T  ++A +GA N+ K++VA+Q+  LR RLRRVPG PL++++R+VLV E  S
Sbjct:    1 MRYLRAKHIRKSLRQFQFLCGIKPPYKVLLDGNFIAMCIKMHVDIAVRLPSFLQTDKCTYFVTRAVLDELKLLSDDADMRAAWEA--------------ASAFEVVEGGSDXX-----XXTDVTSSMVAAVGARNDKKFIVATQETELRGRLRRVPGVPLIYLNRSVLVFEDMS 155          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: G4YZS4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZS4_PHYSP)

HSP 1 Score: 108 bits (270), Expect = 1.130e-24
Identity = 68/180 (37.78%), Postives = 93/180 (51.67%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQ--GASMHLYVPRSAREELKALGPEFKKAY----NFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPS 174
            MR  RAK  R+ LR F  + GI  PYKV+LDGNFI  C+   VD+++R+   LQ     +  YVPR+A EELK LG   K+AY    NF +      P      P                      D +K + + IG  N+ K++V +Q+  LR  LR VPG PL++++R+VLV E  S
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCVQMKVDVQERVPKFLQVKAHEVEFYVPRAALEELKMLGEATKEAYELAQNFKVAEVYDQPKTDGDAPV---------------------DVSKVVQSIIGDKNDRKFVVCTQEVELRKALRLVPGVPLIYLNRSVLVFEDIS 159          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: A0A7S1C1L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1L6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.500e-24
Identity = 74/191 (38.74%), Postives = 107/191 (56.02%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQGAS--MHLYVPRSAREELKALGPEF----KKAYNFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAE 185
            MR+ R KQ+R+ LRF+R++Y +S P+KV+LDGNFIH  + ++ +I++ L S+LQ     + L+V      EL++LG EF     +A  F + RC                   G  D+   AAE        I + IG  N+  + VASQD  LR+RLR V G P++ +S++VLV+EQPS  SK   EK E
Sbjct:   37 MRILRQKQHRKILRFYRMMYNVSPPFKVLLDGNFIHIGLRTSAEIKRLLPSLLQERPDVVRLFVTPCILNELRSLGAEFGDTLAEARTFRVARC-------------------GHGDDPVSAAEC-------IASLIGTKNKEHFFVASQDGLLRSRLRAVAGTPIILLSQSVLVLEQPSDASKGLVEKNE 201          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: D8LKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG2_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.770e-24
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQGASMHLYVP 63
            MRVTRAKQYR+HLRFFRIVYGISAPYKVILDGNFIHGCISS VDIE+RL SVLQ   +H + P
Sbjct:    1 MRVTRAKQYRKHLRFFRIVYGISAPYKVILDGNFIHGCISSKVDIEKRLTSVLQ---LHYHCP 60          
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Match: A0A3M6VBL2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBL2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.080e-24
Identity = 68/176 (38.64%), Postives = 98/176 (55.68%), Query Frame = 0
Query:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLASVLQGA--SMHLYVPRSAREELKALGPEFKKAYNFAIGRCRGLPLPPNHTPAAAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRARLRRVPGCPLVFVSRTVLVMEQPS 174
            MR  RAK  R+ LR F  + G+ APYKV+LDGNFI  C+   VD+++R+   LQ        YVPR+A EEL+ LG   K+AY  A    +   +  ++             D+ E   +K  D +K I   IG  N+ K++V +Q+  LR  LR VPG PL++++R+VLV E+ S
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGLKAPYKVLLDGNFIAMCLQMKVDVQERVPKYLQVKPYECEFYVPRAALEELQLLGKTMKEAYELA----KSFKVAESY-------------DQSEKEEDKPVDVSKAIQIIIGDTNDRKFVVCTQEVELRKALRLVPGVPLMYLNRSVLVFEEIS 159          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVJ1_9PHAE7.610e-10782.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKG1_ECTSI1.330e-5575.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFL8_9STRA5.140e-5349.28Fcf1-domain-containing protein n=1 Tax=Tribonema m... [more]
W7T2Y0_9STRA1.400e-3039.39Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
A0A7S2B5Q5_9STRA2.000e-3037.25Hypothetical protein n=3 Tax=Dictyocha speculum Ta... [more]
W4H7D3_9STRA7.890e-2540.23Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
G4YZS4_PHYSP1.130e-2437.78Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A7S1C1L6_9STRA1.500e-2438.74Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
D8LKG2_ECTSI1.770e-2482.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A3M6VBL2_9STRA3.080e-2438.64Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..180
e-value: 6.6E-36
score: 125.5
NoneNo IPR availablePANTHERPTHR12416:SF3RRNA-PROCESSING PROTEIN UTP23 HOMOLOGcoord: 1..277
NoneNo IPR availablePANTHERPTHR12416UNCHARACTERIZEDcoord: 1..277
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR006984rRNA-processing protein Fcf1/Utp23PFAMPF04900Fcf1coord: 124..172
e-value: 9.0E-10
score: 38.8
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 25..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3670100..3674630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1420.1mRNA_C-linearis_contig11.1420.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3669512..3674658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1420.1 ID=prot_C-linearis_contig11.1420.1|Name=mRNA_C-linearis_contig11.1420.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=295bp
MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSNVDIEQRLA
SVLQGASMHLYVPRSAREELKALGPEFKKAYNFAIGRCRGLPLPPNHTPA
AAGTDEEGGADEGEGAAEKGPDPTKEIIATIGAANEGKYLVASQDENLRA
RLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKRSVGTTEEEDRVL
SILKKREREQRERERASQPRKRLKKKASAPNPLSAKKSSSSSGKAGGGGG
GGAKANASPASSSGAGGNRVRRKRKKSSRSPGGGGEAGGAAGSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006984Fcf1/Utp23
IPR029060PIN-like_dom_sf