prot_C-linearis_contig11.1380.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1380.1
Unique Nameprot_C-linearis_contig11.1380.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length275
Homology
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BLAST of mRNA_C-linearis_contig11.1380.1 vs. uniprot
Match: A0A6H5KZW3_9PHAE (Omp85 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW3_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 4.090e-93
Identity = 167/258 (64.73%), Postives = 185/258 (71.71%), Query Frame = 0 
Query:   16 SRCHGVSLTSSWPFSFVKATAGAGYQQVSPPTNLLKHGSHAAAATVVDEPYSAVGV-----------DTESGGEDGGGALDVFALSGGLSRDWRLPGVLRRLGSWGAGDRRAPAGGEXXXXXXXXXXSVSSFLDVKTGCLLEGGVAPRPFTHELATLVQRMPVGPQGKAGSWNATLNVRQQVQHCSKDTPLHQVTPFGGQRTVRGFAEGELGRAKAYALSTAEVRIPLKNVLGKLPAQAVVFLDLSAFRPVTWSRSTA 262
            S  HGVSL+SSWPF+  K TA AGYQQ+SPPTN+L+  S                            +T  G  D  GA+D+  LSGG+SRDWRLPGVLRRLG  G         G XXXXXXXXX SVSSFLDVKTGCLLEGGVAPRPF+HE ATLV R+P+GP GK GSWNATLNVR QVQHCSKDTPL+QV PFGGQRTVRGFAEG LGRAK YA STAEVR+PL+N+ G LP QAV+FLDL+AFR VTW R  A
Sbjct:  561 SSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXETRRGSWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGKGPS-------GXXXXXXXXXXGSVSSFLDVKTGCLLEGGVAPRPFSHESATLVHRVPLGPHGKGGSWNATLNVRHQVQHCSKDTPLYQVPPFGGQRTVRGFAEGGLGRAKEYATSTAEVRVPLRNLFGTLPTQAVLFLDLAAFRSVTWPRGAA 811
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BLAST of mRNA_C-linearis_contig11.1380.1 vs. uniprot
Match: D8LKK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK3_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 3.460e-61
Identity = 133/280 (47.50%), Postives = 149/280 (53.21%), Query Frame = 0 
Query:   15 MSRCHGVSLTSSWPFSFVKATAGAGYQQVSPPTNLL-KHGSHAAAATVVDEPYSA----------------VGVDTESGGEDGGGALDVFALSGGLSRDWRLPGVLRRLGSWG--AGDRRAPAGGEXXXXXXXXXXSVSSFLDVKTGCLLEGGVAPRPFTHELATLVQRMPVGPQGKAGSWNATLNVRQQVQHCSKDTPLHQVTPFGGQRTVRGFAEGELGRAKAYALSTAEVRIPLKNVLGKLPAQAVVFLDLSAFRPVTWSRSTAAGGNFQRRHGGWE 275
            +S  HGVSL+SSWPF+  K TA AGYQQ+SPPTN+L KH                                V      G  D  GA+D+  LSGG+SRDWRLPGVLRRLG  G   G   A AG            SVSS+LDV+TGCLLEGG APRPF+HE ATLV R+PVGP GK GSWN TLNVR QV                     RGFAEGELGRAK YA STAEVR+PL+N+ G LP Q                         +RRH GWE
Sbjct:  366 LSSSHGVSLSSSWPFAIAKVTAAAGYQQISPPTNVLRKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRRRGLWDDSGAMDLLTLSGGVSRDWRLPGVLRRLGGAGPSTGAAAAAAG------------SVSSYLDVRTGCLLEGGAAPRPFSHESATLVHRVPVGPHGKGGSWNVTLNVRHQV---------------------RGFAEGELGRAKEYATSTAEVRVPLRNLFGTLPTQQ------------------------RRRHHGWE 588
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZW3_9PHAE4.090e-9364.73Omp85 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LKK3_ECTSI3.460e-6147.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000184Bacterial surface antigen (D15)PFAMPF01103Bac_surface_Agcoord: 186..251
e-value: 4.3E-5
score: 23.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3309202..3312047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1380.1mRNA_C-linearis_contig11.1380.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3309202..3312061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1380.1 ID=prot_C-linearis_contig11.1380.1|Name=mRNA_C-linearis_contig11.1380.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=275bp
MLGGGGVTAAADHGMSRCHGVSLTSSWPFSFVKATAGAGYQQVSPPTNLL
KHGSHAAAATVVDEPYSAVGVDTESGGEDGGGALDVFALSGGLSRDWRLP
GVLRRLGSWGAGDRRAPAGGEGGQGGSGGGGSVSSFLDVKTGCLLEGGVA
PRPFTHELATLVQRMPVGPQGKAGSWNATLNVRQQVQHCSKDTPLHQVTP
FGGQRTVRGFAEGELGRAKAYALSTAEVRIPLKNVLGKLPAQAVVFLDLS
AFRPVTWSRSTAAGGNFQRRHGGWE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000184Bac_surfAg_D15