prot_C-linearis_contig11.1379.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1379.1
Unique Nameprot_C-linearis_contig11.1379.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length124
Homology
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BLAST of mRNA_C-linearis_contig11.1379.1 vs. uniprot
Match: A0A6H5KZW3_9PHAE (Omp85 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW3_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.950e-10
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:   82 GGFRVGRGQGVGLRIADLIQVDLGISRSGMKQLHIGLVDRNF 123
            GGFR  RGQGVGLRIA+LIQVD  ISR GMKQLHIGLVD +F
Sbjct:  920 GGFRAERGQGVGLRIAELIQVDFCISRGGMKQLHIGLVDGHF 961
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BLAST of mRNA_C-linearis_contig11.1379.1 vs. uniprot
Match: D8LKK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK3_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 8.640e-5
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:   82 GGFRVGRGQGVGLRIADLIQVDLGISRSGMKQ 113
            GGFR  RGQGVGLRIA+LIQVD  ISR GMKQ
Sbjct:  684 GGFRAERGQGVGLRIAELIQVDFCISRGGMKQ 715
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZW3_9PHAE1.950e-1080.95Omp85 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LKK3_ECTSI8.640e-581.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3304488..3305812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1379.1mRNA_C-linearis_contig11.1379.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3304145..3305828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1379.1 ID=prot_C-linearis_contig11.1379.1|Name=mRNA_C-linearis_contig11.1379.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=124bp
MQHQHQQQDEPANEPAEPPLEGDSPAAAVAGGDLVPSPATALVAPPIAAS
QEVTIPSAGEWRTSPPASSPSSPPPAAAAAAGGFRVGRGQGVGLRIADLI
QVDLGISRSGMKQLHIGLVDRNF*
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