prot_C-linearis_contig11.1366.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1366.1
Unique Nameprot_C-linearis_contig11.1366.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length180
Homology
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: D7FXX6_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX6_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 1.740e-103
Identity = 147/179 (82.12%), Postives = 154/179 (86.03%), Query Frame = 0
Query:    1 MSLTCAKRLRKEMHKLQSSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAAKDWPPEF 179
            MSLT AKRLRKEMHKLQ+SPPDEDIRMSADEDDIR WRAY+RGPPDTPFAGGI                   YELKITVGQQYPMVPP M F+TKVFHPNVHFNTGEICLNILKK+WSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRS+ARLY EELA+KDWP +F
Sbjct:    1 MSLTSAKRLRKEMHKLQTSPPDEDIRMSADEDDIRQWRAYIRGPPDTPFAGGI-------------------YELKITVGQQYPMVPPCMRFVTKVFHPNVHFNTGEICLNILKKDWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSVARLYNEELASKDWPADF 160          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A6S9GG99_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GG99_HETAK)

HSP 1 Score: 202 bits (514), Expect = 1.040e-63
Identity = 97/170 (57.06%), Postives = 125/170 (73.53%), Query Frame = 0
Query:    7 KRLRKEMHKLQSSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAAKDWP 176
            KRL+KE+  L+ S  D DI++  + +++R  + ++RGPPDTPFAGGI                   YELKI +GQQYPMVPP+M F+TK+FHPN+HF+TGEICL+ILKKEWSPAW LQ ACRAI+A+++ P ADSPLNCDAGNMVRA DMRA+ S+A +Y+ E A  + P
Sbjct:    5 KRLKKELENLKKSD-DNDIKLYENPENMRKIQGFIRGPPDTPFAGGI-------------------YELKIDIGQQYPMVPPTMEFVTKIFHPNIHFDTGEICLDILKKEWSPAWGLQAACRAIIAIMSDPAADSPLNCDAGNMVRAEDMRAYGSIASMYRIEHALTEMP 154          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A7S2UYB8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYB8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.810e-63
Identity = 98/176 (55.68%), Postives = 124/176 (70.45%), Query Frame = 0
Query:    1 MSLTCAKRLRKEMHKLQSSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAAKDWP 176
            M+L  +KRLRKE+  L+ SP D DI +  D ++IR  + ++RGPP TPF  GI                   YEL+I + Q YPMVPPSM F+TK+FHPNVHF+TGEICL+ILK EWSPAW LQ ACRA++AL++ P ADSPLNCDAGNM+RAGDMRA+ ++A +Y+ E A K  P
Sbjct:    1 MALASSKRLRKEIQNLKKSP-DSDIFLIPDPNNIRSIQGFIRGPPSTPFENGI-------------------YELQIDISQNYPMVPPSMKFVTKIFHPNVHFDTGEICLDILKSEWSPAWGLQPACRAVIALMSDPAADSPLNCDAGNMIRAGDMRAYHAVASMYQIEYALKSVP 156          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A835Z5T9_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5T9_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.190e-62
Identity = 95/176 (53.98%), Postives = 121/176 (68.75%), Query Frame = 0
Query:    1 MSLTCAKRLRKEMHKLQSSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAAKDWP 176
            MS+ C KRLR E   ++S   D DI + + E DIR W+A++RGPP TP+ GG+                   +EL +TVG QYP+VPP++ F+T+VFHPNVHF TG ICL++L + W+PAW LQ  CRA+LALL+ P ADSPLNCDAGNM+RAGD  AF SMAR+Y  E AA+D P
Sbjct:    1 MSMACFKRLRME---IKSMSDDPDIFLESSESDIRRWKAHIRGPPGTPYEGGV-------------------FELDLTVGMQYPLVPPAVTFVTRVFHPNVHFTTGAICLDVLSRAWTPAWGLQATCRALLALLSDPAADSPLNCDAGNMIRAGDACAFESMARMYTLEHAARDMP 154          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A7S1VE29_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE29_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.540e-58
Identity = 92/180 (51.11%), Postives = 121/180 (67.22%), Query Frame = 0
Query:    3 LTCAKRLRKEMHKLQSSPPDED---IRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAA-KDWPPE 178
            L  AKRLRKE+  L+ S  + D   +R +  E+ I +W A ++GPPDT + GG+                   ++L I  G  YP+VPP++ F+TK+FHPN+HF TG++CL+ILKKEWSPAW LQ ACRA+LALL+ P+ADSPLNCDAGNMVR+ DM A+RS AR+Y  E A   +WP E
Sbjct:    6 LAAAKRLRKELQNLEKSKHEVDDVFLRPTNPEESILMWTALLKGPPDTAYEGGV-------------------FQLNIRCGSDYPLVPPNIKFMTKIFHPNIHFKTGDVCLDILKKEWSPAWGLQAACRAVLALLSDPDADSPLNCDAGNMVRSNDMLAYRSTARMYTVENAMFLEWPKE 166          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A7S2SP60_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP60_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.280e-57
Identity = 91/170 (53.53%), Postives = 117/170 (68.82%), Query Frame = 0
Query:    7 KRLRKEMHKLQSSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAAKDWP 176
            KRLRKE+  ++    DE+I +  +ED+IR W+AY+RGPP T + G +                   Y + I VG +YP+ PP + F+TKVFHPNV+F+TGEICL+ILK+ WSPAWSLQ ACRAI+ALLA P+ DSP NCDAGNM+RAGD+ AF S+ RLY EE    D+P
Sbjct:   30 KRLRKELSSIRKER-DEEIELQPNEDNIRQWQAYIRGPPGTAYQGKV-------------------YCMSIHVGAEYPLEPPKVTFLTKVFHPNVNFSTGEICLDILKRNWSPAWSLQAACRAIIALLADPDVDSPWNCDAGNMIRAGDLVAFESIVRLYAEEHGLDDFP 179          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A448YY37_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY37_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.730e-57
Identity = 91/178 (51.12%), Postives = 120/178 (67.42%), Query Frame = 0
Query:    1 MSLTCAKRLRKEMHKLQ-SSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAA-KDWP 176
            ++L  AKRLRKE+  L+ +  PD DI +  D ++I  W A +RGP DTP++GG+                   ++L I  G  YP+ PPS+ F+T+VFHPNVHF TG++CL+ILKKEWSPAW +Q ACRAILALL+ P+ADSPLNCDAGNM+R GDM A+ + AR++  E A    WP
Sbjct:    3 LNLAAAKRLRKELQNLKRTKEPDPDIYLIPDGNNILQWTALLRGPSDTPYSGGV-------------------FQLAIDCGADYPLAPPSITFVTRVFHPNVHFRTGDVCLDILKKEWSPAWGVQAACRAILALLSDPDADSPLNCDAGNMIRGGDMLAYNTTARMFTVENAMFLAWP 161          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A2D4BF74_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF74_PYTIN)

HSP 1 Score: 181 bits (458), Expect = 3.140e-55
Identity = 90/173 (52.02%), Postives = 115/173 (66.47%), Query Frame = 0
Query:    4 TCAKRLRKEMHKLQSSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAAKDWP 176
            T  KRLRKE+ +L+ +  +ED+ +  +ED I  WRA++RGP DTPFAG         +C          +EL I     YPM PP M F+TK+FHPNVHF  G ICL+ILK+EWSPAW+L+ AC A+++LL+ P ADSPLNCDAGNM+RAGDM A+ SMA +Y  E    D P
Sbjct:    3 TNVKRLRKELQELRKNK-EEDMVLFPEEDTIMRWRAFIRGPADTPFAG---------RC----------FELAIQTTPLYPMEPPKMKFVTKIFHPNVHFKDGSICLDILKREWSPAWTLRAACLAVISLLSDPAADSPLNCDAGNMIRAGDMLAYNSMASMYTREHGLPDLP 155          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A1E7FW51_9STRA (Ubiquitin-conjugating enzyme n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW51_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.920e-55
Identity = 90/177 (50.85%), Postives = 116/177 (65.54%), Query Frame = 0
Query:    2 SLTCAKRLRKEMHKLQ-SSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEELAA-KDWP 176
            +L  AKRLRKE+  L+ +   D DI +  D D+I  W A ++GP DTP+A G+                   ++L I  G  YP+ PP + F+TK+FHPNVHF TG++CL+ILKKEWSPAW +Q ACRAILALL+ P+ADSPLNCDAGNM+R GDM A+ + AR+Y  E A    WP
Sbjct:    4 NLAAAKRLRKELQNLERAKEQDPDIFLIPDGDNILRWTALLKGPCDTPYAEGV-------------------FQLAIDCGSDYPLSPPKIKFLTKIFHPNVHFRTGDVCLDILKKEWSPAWGVQAACRAILALLSDPDADSPLNCDAGNMIRGGDMLAYNTTARMYSVENAMFLAWP 161          
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Match: A0A4D9CWL3_9STRA (UBC core domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWL3_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.580e-55
Identity = 83/148 (56.08%), Postives = 105/148 (70.95%), Query Frame = 0
Query:   22 DEDIRMSADEDDIRLWRAYVRGPPDTPFAGGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPNVHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNMVRAGDMRAFRSMARLYKEE 169
            D D+ +   ED+IRLW A ++GP +TPF GG                    +EL+I VG  YP+ PP + F+T +FHPN+HF TGEICL+ILKKEWSPAWSLQ ACRA++ALLA P+A+SPLNCDAGNM+R GD+RA+ +MARLY  E
Sbjct:    3 DTDMELWPQEDNIRLWHAIIQGPGETPFEGGT-------------------FELRIEVGTDYPIRPPVIRFVTHIFHPNIHFETGEICLDILKKEWSPAWSLQTACRAVVALLAAPDAESPLNCDAGNMLRGGDVRAYNAMARLYTVE 131          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXX6_ECTSI1.740e-10382.12UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A6S9GG99_HETAK1.040e-6357.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UYB8_9STRA3.810e-6355.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z5T9_9STRA2.190e-6253.98Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S1VE29_9STRA2.540e-5851.11Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2SP60_9STRA2.280e-5753.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A448YY37_9STRA4.730e-5751.12UBC core domain-containing protein n=1 Tax=Pseudo-... [more]
A0A2D4BF74_PYTIN3.140e-5552.02Ubiquitin-conjugating enzyme E2, putative n=1 Tax=... [more]
A0A1E7FW51_9STRA3.920e-5550.85Ubiquitin-conjugating enzyme n=1 Tax=Fragilariopsi... [more]
A0A4D9CWL3_9STRA4.580e-5556.08UBC core domain-containing protein n=2 Tax=Monodop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..172
e-value: 6.8E-48
score: 175.1
NoneNo IPR availablePANTHERPTHR24068:SF249coord: 8..69
NoneNo IPR availablePANTHERPTHR24068:SF249coord: 71..172
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 8..69
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 71..172
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..173
e-value: 8.3E-45
score: 154.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 1..172
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 71..166
e-value: 2.1E-30
score: 105.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 7..160
score: 29.05
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 97..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3168875..3170710 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1366.1mRNA_C-linearis_contig11.1366.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3168875..3170710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1366.1 ID=prot_C-linearis_contig11.1366.1|Name=mRNA_C-linearis_contig11.1366.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=180bp
MSLTCAKRLRKEMHKLQSSPPDEDIRMSADEDDIRLWRAYVRGPPDTPFA
GGIGNKLGTCQCRAYPSIPIGIYELKITVGQQYPMVPPSMHFITKVFHPN
VHFNTGEICLNILKKEWSPAWSLQGACRAILALLAHPEADSPLNCDAGNM
VRAGDMRAFRSMARLYKEELAAKDWPPEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS