prot_C-linearis_contig11.1365.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1365.1
Unique Nameprot_C-linearis_contig11.1365.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1050
Homology
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A6H5KUV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV8_9PHAE)

HSP 1 Score: 761 bits (1966), Expect = 7.610e-256
Identity = 569/1063 (53.53%), Postives = 654/1063 (61.52%), Query Frame = 0
Query:    3 RKGVKRPLPCGFGTGASPCVVARPSDNSTXXXXXXXXVRNPQSQSSLPR-HRSSSQHTQHRRRTPPLPAHKGRGGDH---------QHPQPKCCG-CRQRWNAPSTA---LRLAGVVGIQVLGLMACPCRGFTPPGLAVG--PALSPDGGQRRGTAAGDFGRRASFACADGDSGGRD---TAGSGSGASAR--HGRRRGXXXXXXXXXXXXXXXXXXXXXXXSTDCRATRLPSAEGGPPLGLLYDRALLKAGMS-YGVDAVGSQN-GNTRNGGNAVSSGAEESSGEGGGDSGMATATGARRDGEESVPAAXXXXXXXXXXXXXXXXTV--VEINSNKI---SNVAQNMT-ARWTSVVNGAATTAVSAATADGQSAAVATAAQASASAVP--RKKWSGRGWLVSRAESE-ERQILQQLGTEPEPT-----AXXXXXXGTLTPSEKELESR-------PDMLNGLAAGAIGVEPD----LGG--PSISSDSSS----------IVVAGXXXXXXXNATGPAVATGLPMV----EGEAAEVARGMLVAAPDGGAAAAAVSAGVDLPSSVAVGEAALQPAGQRDPNTEL-ELGGEKADVCTAAREELTAYLLEAGATEELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRSTGFKGSDVAGMLALCPQLLALDYEGQVVPTMELLRQLGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQRKAIGNLGGQSTTNNVSEVTARATGLPPKRR 1000
            RKG+KRPLPC   T  S C    P  +          V     +   PR H   ++  Q + R                       QH   K CG CR++ N  + A   LRLAGVVGI VLG MACPC+GFTPP L+ G  P L+ DG Q R     DF  R+    +D  + G     + G+ +G S R   GRRR                        S  CRATRLPSAE GPP+GLLYDR LL+A  +  G D   S N   +R+G ++ + G ++S GE      +A A G+           XXXXXXXXXX       V  V + S  +   +++AQ+ T  +W +VV G   T+ +            +  + +A A P  RKKWSG+GWLVSRA+ E E +   Q   E         A       ++ P+   +E+         D++NG   G   V+      + G  PS  SD S                XXXXXXX           P V    EGE A                                       A + D +T L + GG    VC  A+EEL  YLLEAGAT++LVA ATAALFAAEPRC+LTEGTWKRWRQNLDGLRS GF  +DV  MLALCPQLLALD+EGQVVPTMELLRQLGMRPTDVRRV+RKAPEVLAPRPDGSTAAEAVDVL  LGLRRRHLKMEA+RWPQLL VPPGSFFQLAAFLASEEVGIK+TNI SLIRQAPWLVLQPIDGQMLPV RFLRIAGV DVER++RAYP             RVRFLWSDVGVSEEDLPRVLQTFPL+FALPLSRM+DVMA XXXXXXXXXXXXXXXXXXXXX        HM GVV YLKRLGVQNVGRFVSRLPPVLGYDV TNLAPKMDYLVE MGLSVYDVLTFPAYFSYPLDTVIEPRTEFL+IRGRPITLVGLNIAL QGDADFARKVA+VQPRVY++FK+AY+  R +VK+G   AE LLS PQR+AIG+LGG ST+NN+S VTARATGLPP ++
Sbjct:   84 RKGLKRPLPCSDTTSTSGCPSPSPCSSVASRPRDDAAVGAGTEERPPPRWHNRCTRRPQRQLRQGTSXXXXXXXXXXXXXXXRCRVQHAADKVCGSCRRKNNTSAAAPSSLRLAGVVGIHVLGFMACPCQGFTPPSLSTGITPPLAADGQQSRLNTP-DFEMRSGVVDSDISARGLVPSLSVGAAAGGSLRAAKGRRR------HRGGSRRFGSGLEGDGDASGVCRATRLPSAEEGPPIGLLYDRGLLEASAAAQGADNTNSNNKSRSRDGVDSANGGVDDSGGEA-----VAAAKGSAMGXXXXXXXXXXXXXXXXXXAPPVAPAVEMVRVESTALQAENSIAQDATDTQWGNVVGGTGATSGAXXXXXXXXXXGLSRGEVAAPAPPARRKKWSGKGWLVSRAKEEAEGRTKSQNRAEATDAGLSSMAVDDDEGTSMVPAVAAVETDRDACLKDTDLVNGKDRGRREVDTRNNLAVAGADPSDRSDDSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVDEKREGEDATSLXXXXXXXXX-----------XXXXXXXXXXXXXXXXADEEDTSTGLGDTGG---GVCATAKEELALYLLEAGATDDLVAIATAALFAAEPRCSLTEGTWKRWRQNLDGLRSKGFSAADVCNMLALCPQLLALDFEGQVVPTMELLRQLGMRPTDVRRVIRKAPEVLAPRPDGSTAAEAVDVLRTLGLRRRHLKMEAMRWPQLLVVPPGSFFQLAAFLASEEVGIKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVADVERVLRAYPKVLSASIRGELAPRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFXXXXXXXXXXXXXXXXXXXXXLLGLERERHMAGVVRYLKRLGVQNVGRFVSRLPPVLGYDVETNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPITLVGLNIALHQGDADFARKVARVQPRVYQDFKKAYINKRAAVKNGLVDAEELLSGPQRRAIGSLGGLSTSNNLS-VTARATGLPPNKQ 1119          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: D7FXW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW7_ECTSI)

HSP 1 Score: 694 bits (1790), Expect = 4.770e-236
Identity = 414/629 (65.82%), Postives = 454/629 (72.18%), Query Frame = 0
Query:  363 RKKWSGRGWLVSRAESEERQILQQLGTEPEPTAXXXXXXGTLTPSEKELESRPDMLNGLAAGAIGVEPDLGGPSISSDSSSIVVAGXXXXXXXNATGPAVATGLPMVEGEAAEVARGMLVAAPDGGAAAAAVSAGVDLPSSVAVGEAALQPAGQRDPNTELELGGEKADVCTAAREELTAYLLEAGATEELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRSTGFKGSDVAGMLALCPQLLALDYEGQVVPTMELLRQLGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQRKAIGNLGGQSTTNNVSEVTAR 991
            RKKWSG+GWLVSRA                               ++E E R    N  A    G +  L   ++  D  + ++           T  AV TGL     EA  +    LV  P GG                        P    + +T  EL      VC   +EEL  YLLEAG T++LVA ATAALFAAEPRC+LTEGTWKRWRQNLDGLRS GF G+DV  MLALCPQLLALD+EGQVVPTMELLRQLGMRPTDVRRV+RKAPEVLAPRPDGSTAAEAVDVL  LGLRRRHLKMEA+RWPQLLAVPPGSFFQLAAFLASEEVGIK+TNI SLIRQAPWLVLQPIDGQMLPV RFLRIAGV DVER++RAYP             RVRFLWSDVGVSEEDLPRVLQTFPL+FALPLSRM+DVMA XXXXXXXXXXXXXXXXXXXX         HM GVV YLKRLGVQNVGRFVSRLPPVLGYDV TNLAPKMDYLVE MGLSVYDVLTFPAYFSYPLDTVIEPRTEFL+IRGRPITLVGLNIAL QGDADFARKVA+VQPRVY++FK+AY+  R +VK+G   A+ LLS PQR+AIG+L G ST+NN+S V ++
Sbjct:   95 RKKWSGKGWLVSRA-------------------------------KEEAEGRAKSQNRAA----GTDAGLSSMAVDDDEGTSMMP----------TVAAVETGL-----EAGLIDTD-LVNVPSGGT---------------------ESPLADEEEDTSTELEDTGGGVCATVKEELALYLLEAGVTDDLVAIATAALFAAEPRCSLTEGTWKRWRQNLDGLRSKGFSGTDVCNMLALCPQLLALDFEGQVVPTMELLRQLGMRPTDVRRVIRKAPEVLAPRPDGSTAAEAVDVLRTLGLRRRHLKMEAMRWPQLLAVPPGSFFQLAAFLASEEVGIKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVVDVERVLRAYPKVLCASIRGELAPRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFXXXXXXXXXXXXXXXXXXXXSLLGLERERHMAGVVRYLKRLGVQNVGRFVSRLPPVLGYDVETNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPITLVGLNIALHQGDADFARKVARVQPRVYQDFKKAYINKRAAVKNGLVDAKQLLSGPQRRAIGSLEGLSTSNNLSTVPSQ 651          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A835Z724_9STRA (mTERF-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z724_9STRA)

HSP 1 Score: 377 bits (968), Expect = 3.170e-117
Identity = 213/406 (52.46%), Postives = 277/406 (68.23%), Query Frame = 0
Query:  598 MLALCPQLLALDYEGQVVPTMELLRQ-LGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIAS------LIRQAPWLVLQPIDGQMLPVTRFLRIA-GVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQR-----KAIGNLGGQSTTNNVSEVTA 990
            M    PQLL + +   VVP MEL+RQ LG RPTD RRV+R+AP+VL PR DGST  + +  L ALGL+ + + ME +RWP+LL   P S  +LA +L S EVG++A +  S      ++RQAPWL    ++ Q+ PV R+L+ + G+ D++R++RAYP             RV FL  +VG++EED+PRV+QTFPLLFA+P+ RM+ V            XXXXXXXXXXX         H+  VV Y++ LG+QN+GRFVSRLPPVLGYDV+ NL PKMDYLV  MGLSVYDVLTFPAYFSYPL+++IEPRTEFL +R RPI +VGLN+AL  GDADFA+K+AKV+P +Y  FK AYM++R  V++G    E LL          K +G+LGG ST++NV EVT+
Sbjct:    1 MAVKMPQLLDMCFSADVVPVMELMRQELGFRPTDARRVLRRAPQVLLPRQDGSTPVDTIAALQALGLKPKMVSMEVIRWPRLLTYSPASLMELATWLGSAEVGMRAASDDSSAVSLNVLRQAPWLAEHDLETQLRPVARYLQESLGIRDMQRVLRAYPQILCCSITKDLEPRVWFLTEEVGINEEDVPRVVQTFPLLFAVPVERMRGVYGLLASELLITRXXXXXXXXXXXSLLGLEPEKHVRAVVAYMRSLGIQNIGRFVSRLPPVLGYDVSNNLMPKMDYLVAMMGLSVYDVLTFPAYFSYPLESIIEPRTEFLKLRRRPIAVVGLNMALTSGDADFAKKIAKVRPELYASFKAAYMKHRAEVQAGTMKGEDLLEMLGLDMLGGKPLGSLGGLSTSSNVQEVTS 406          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A7S2D3S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3S4_9STRA)

HSP 1 Score: 205 bits (522), Expect = 8.940e-53
Identity = 139/447 (31.10%), Postives = 207/447 (46.31%), Query Frame = 0
Query:  579 RQNLDGLRSTGFKGSDVAGMLALCPQLLALDYEGQVVPTMELLRQ-LGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDV--------------------------------------GVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIR-GRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQRKAIGNLGGQSTTNNV 985
            R++LD L   G +G D+A +L+ CP++         V T+ +L+    +R  D+RR+ R  P +L      S   E +  L  + L  ++LK+  LRWP++L     +   L+ FL+  +VG K   I SL+R+APWL+   ++ QM PV RFL    V  +E ++RAYP             R+ FL  D+                                      G++ E + +V ++FP L  L                                        H D  V +L+ +GV+N+GRFV RLPPVLGYDV  N+ PK +YL +++GLS YD+  FPAYFSYPLD VI PR  +LS R  R  ++ GLN  L   D  FA KVA      Y  ++ ++ +     +   A AE+  +E Q++  G+ G  S   +V
Sbjct:  116 RESLDMLGEGGLEGPDIADILSACPEISNKAQAVSAVQTLTILQNTFELRRYDLRRIARSEPTILLK----SDLTETLQALNDMKLSGKNLKLTLLRWPKILTYSTTTILNLSGFLSHPQVGFKEDQIGSLVRKAPWLLDGNLETQMGPVVRFLTKLQVRRIETVIRAYPQVLLTDVKTELLPRIEFLMKDLDLSLADASSXXXXXXXXXXXXXXXXXXXXXXXLSNDRLGIAPESVSKVFRSFPSLLGLDTVE------------------------------------HFDVSVSFLQEIGVENIGRFVLRLPPVLGYDVEINMRPKWEYLTDTLGLSTYDITRFPAYFSYPLDKVIMPRASYLSDRCNRKASIWGLNTILTLSDDAFAEKVALTSKEEYAAYRASFAKQLERARVEEA-AEAANTEVQQQQDGSSGVDSLQQSV 521          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A7S3YEI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEI3_HETAK)

HSP 1 Score: 202 bits (514), Expect = 7.650e-52
Identity = 149/430 (34.65%), Postives = 214/430 (49.77%), Query Frame = 0
Query:  538 EELTAYLLEAGATEELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRST-GFKGSDVAGMLALCPQLLALDYEGQVVPTMELLRQL----GMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-MDGVVLYLKR-LGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAG 960
            E LT +LL+AGA    VA     L AA       +G    WR NL  L    GF G D+A +L   P  LA++ +       E+L  L    G+R ++VR+VVR+AP++LAPR DG++AA+    L  +GLR R L+   +  P+LLA  P + F+ +AFL S++VG +A ++ +L ++APWL  +P+  ++  V R+LR  GV DVE + R YP              + FL  +VG++      V+Q +P   AL L   + V+A                                +  VV YL+  LGV+  GRFVS                         GL  +D+L FPA  +YPL+ VI PRTEFL++  RP+  +GLN AL  GD DFA KVA  +P  Y+ FK+A+   +   +  R G
Sbjct:    5 EPLTYFLLQAGANHAEVA---GVLSAAGAFIRAVQGN-PFWRTNLQYLLDDQGFTGQDLAQLLQAWPDFLAVECDATGYMETEVLDYLYGTVGLRRSEVRKVVRRAPQLLAPRADGTSAADTAAALALVGLRPRALRAALVAHPRLLAHTPRAVFECSAFLMSKDVGAQAAHLGALYKRAPWLPGRPV-AELRAVARWLRQIGVEDVENVFRGYPEVALRDVEELDAAFL-FLLEEVGLAPLQAALVVQAYPSALALDLGAARGVLAYLSGPELGLSAAERRRVLRAFPSLLAAPVRGGLAPVVAYLREELGVRAPGRFVSAAXXXXXXXXXXXXXXXXXXXXXXXGLGAFDLLRFPACLTYPLEEVIAPRTEFLALCRRPVGQLGLNKALAPGDDDFAAKVALTRPETYQLFKKAFRRKQQQAQRRRQG 428          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: R7Q6P9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P9_CHOCR)

HSP 1 Score: 179 bits (453), Expect = 4.510e-44
Identity = 164/438 (37.44%), Postives = 234/438 (53.42%), Query Frame = 0
Query:  578 WRQNLDGLRSTGFKGSD---VAGMLALCPQLLALDYEGQVVPTMELLRQLGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLR----IAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDV-GVSEEDLPRVLQTFPLLFALPL-SRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQR----KAIGNLGGQS--TTNNVSEVTARATGLPPKRR 1000
            W   +D L S    GS    +A  L + P+LL L+    V     L   + +   +  RV+ + P++L          +AV+ L   GLR + +K    RWP LL +      ++ AFL +  VG    N+ SL+R+APW+++  I  +M+P   +L+    +     V++ +RA P             +V    SDV G++   L   L++FP L    + + +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     V Y +R G+ NVGR V RLPP+LGYD++TN+ PKM+Y+ + +GLS YD+LTFP YFSY  +  IEPRT+FL  +GR +T  GLN+AL   D DF  +VAKV    Y  FK A++  R + K+       ++ E +     + IG        TT N S   + + G   KR+
Sbjct:   90 WSMLMDTLASHDINGSVLSCIAERLGV-PELLRLEPAHVVSVLHYLSTYVQLADAERNRVIIRRPDILK---SPEHLRKAVEALETSGLRLKDIKTVVQRWPGLLLLDARKINRVTAFLQTPAVGFSLPNLRSLLRRAPWVLVYDIGSEMIPAISYLKRVLDLPNRAPVDQFIRARPLLLGTSPDAMQ--KVTDFMSDVVGLTPTMLSVALRSFPPLLTCSIDATLAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNYFRRKGIINVGRIVKRLPPILGYDLDTNIIPKMEYIEQELGLSSYDILTFPGYFSYSFEKCIEPRTKFLQAKGRSVTESGLNMALGLKDEDFCVRVAKVPISQYYAFKAAFLLGRKNEKAAVEPTNDVVKESRNSNGDEEIGXXXXXXXRTTQNASRRLSNSNGKRRKRK 521          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: F0Y3H4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3H4_AURAN)

HSP 1 Score: 178 bits (452), Expect = 8.320e-44
Identity = 157/399 (39.35%), Postives = 206/399 (51.63%), Query Frame = 0
Query:  585 LRSTGFKGSDVAGMLALCPQLLALDYE-----GQVVPTMELL-RQLGMRPTDVRRVVRKAPEVLA-PRPDGS-----------------------------TAA--EAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKE 945
            L   GF   DV+GM+  CP+L A         G V  T++ L +   MR  D+R+VVR+ P++L  P  D S                             TAA  + V +L ++G+R +H+K   +RWPQLL++       +  ++ S  +G +  +I SL R  PWL+  P+       T      GVT+VE +VRAYP              +  L    GV E DL  +++ FPLLF L    M  V+          XXXXXXXXXXXXXXXXXX    M   V +L+ +GV N  RFV+RLPPVL YDV+ +L PKM  LV+   LSVYDV+ FPAYFSYPLD VI+PRT FL   G PIT   L      GD +FA +V  V P+ Y  FK+
Sbjct:   87 LEDAGFTQDDVSGMVERCPELAARGGNTSALLGDVRATVQFLSKTFAMRKYDLRKVVREQPKILLKPAADASIFDTGACPAVLAATSGGPAAGPRSGDLDATAAISDTVLLLTSVGVRTKHVKEMVVRWPQLLSIEMPQMLAVTDYINS--LGFER-SIGSLYRANPWLLAAPVATVRDAATVLRDEVGVTNVENVVRAYPRALLSDRESLLRP-LDVLRERAGVDEADLASLVEAFPLLFGLD-DAMGPVLDFWLDELKINXXXXXXXXXXXXXXXXXXVAT-MRANVKFLEGIGVVNTARFVTRLPPVLAYDVDRDLRPKMAELVKC-ALSVYDVVRFPAYFSYPLDGVIKPRTAFLKQLGVPITTFPLQALFTPGDKEFASRVLGVDPKRYAAFKK 478          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A7S2Y096_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y096_9STRA)

HSP 1 Score: 170 bits (430), Expect = 7.180e-43
Identity = 119/331 (35.95%), Postives = 182/331 (54.98%), Query Frame = 0
Query:  635 VRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSD----------VGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVK 955
            V++ P+V+ PR DGST A+ +     +G + +      ++ P L+  PP   F +++++ S++V IK   + SL R+APWL+ Q ++  M  V R+L   G    E++ RA+P                FL  D           G+  ED+P+VL+ FP L +  +    D              XXXXXXXXXXXXX       M  VV++L+  G+++VG  ++RLP +LGY V+  +APK++Y  E M L + ++  FPA+FSYPL+T I+ RTEFL+I G  I+ VGL   L   D DF++KV KV P+ ++ FK +Y++    VK
Sbjct:    1 VKQIPQVMVPRKDGSTIADTIKAFGMIGFKGKSFLNTVMQHPSLILHPPLQVFLVSSYMMSKQVRIKRNGLGSLYRKAPWLLDQNVED-MRKVGRWLTNIGXXXXEQVFRAHPEVLLQNIKQTLDRVYNFLVDDSDFDKGTGGGAGLDPEDVPQVLELFPRLLSAGMPEHID-RVRHYMRSVGIPDXXXXXXXXXXXXXLTLDIEDMQQVVVFLRGAGMESVGEMLTRLPSILGYSVSA-IAPKLEYFTEYMDLEIEELERFPAFFSYPLET-IQTRTEFLAILGNSISGVGLRRVLTPSDDDFSKKVVKVNPKFFQLFKNSYLKGGSKVK 327          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A6U2R904_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2R904_9STRA)

HSP 1 Score: 169 bits (427), Expect = 8.850e-40
Identity = 138/395 (34.94%), Postives = 191/395 (48.35%), Query Frame = 0
Query:  576 KRWRQNLDGLRSTGFKGSDVAGMLALCPQLLALDYEGQVVPTME-----LLRQLGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQ-----------------------------APWLVLQPIDG---QMLPVTRFLRIA-GVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKV 932
            +R  +  + L S G  G D A +    P L AL  +G V   +E     L + LG+R  D R+V+R  P +L P+   ++AA+ VD+L +LG+ R  L  +    P LL+  P S F+LAAFLAS  V +    +  L+R+                                LV + ID    +M      LR   GV DV ++V A+P              VRFL  +V + +ED+P+VL+ FP L +  + +++  +A              XXXXXXXXX        M  V+ +L  +GV N+GRFV+RLPP+LGY V   L PK  Y  E  G   +DV+ FPA FSYP D +I  R E+L  R  P   VGL+  L  GD DFAR V
Sbjct:  239 ERIERVFEQLFSAGLTGKDCAAVFIHTPSL-ALSKDGNVSEGVECAMRLLCQTLGLRRYDSRKVIRTCPGLLTPQ-GANSAAQIVDMLSSLGVSRSALARDKTSLPSLLSRQPSSLFRLAAFLASNLVRLPTDKVGPLLRRHGSSSLLNSVVPLEYSLKLQANENVGEAIVSRLVREEIDDAYRRMKLSAEVLREEFGVDDVAKVVTAFPDVLLLDSPTQIAPVVRFLRDEVYLKDEDIPKVLEAFPTLLSADVEQLRKRVAFLGSLDIVPDNLSKXXXXXXXXXFLDVST-QMIPVIQFLVEIGVVNLGRFVTRLPPILGYSVERELRPKWQYFKE-FGFDYFDVVRFPATFSYPFDRIIVTRFEYLKTRNIPPKAVGLDKILSSGDTDFARIV 629          
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A7S3JTN4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTN4_9STRA)

HSP 1 Score: 162 bits (411), Expect = 2.620e-38
Identity = 142/497 (28.57%), Postives = 215/497 (43.26%), Query Frame = 0
Query:  539 ELTAYLLEAGATEELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRSTGFKGSDVAGMLALCP-QLLALDYEGQVVPTMELL-RQLGMRPTDVRRVVRKAPEVLAPRPDGS-------------------------TAAEAVDV-------LCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKA--------------TNIASLIRQAPWLVLQPIDGQMLPVTRFLRI-AGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPI-----------------------------------TLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENR 951
            EL   LLE GA+E  V T  A    + P  ++ EG +       + L   GF G ++A +L   P QL A      +  +++ L  + G++  ++RR+ +  P++L  +P  S                         +    VD+       L  +G R R +K   +RWPQ+L +       +  FL+S  VG                   +++L RQAPWL+   +  Q+ PVT FLR  AGV  ++ ++ A+P             R+  L    GV+E    ++++TFPL+  L +S   D +                                M   + +L+ +GVQN+ RFV+RLPPVL YDV + L PKM + V++  LS+YDV+ FPAYFSYPLD VIEPR  FL  R RPI                                     +GL+  L   D  FA K+A   P+ Y +FK+ +++ R
Sbjct:   41 ELREILLEGGASETEV-TEMAMKLGSIPGESIIEGAYLA----AEALTKRGFSGGEIATILGQSPRQLCAPGAVDDIAASLDFLSEEAGLKNRELRRIAKLRPQILVKKPKLSVFRDTGACPAVLATVAGGPIFNIRNSTCSPVDIIRDIIFFLQGVGFRDRRIKELLVRWPQILTIEMPQLLAVTDFLSSN-VGFSTPALREKYPQFYQNTAPLSALYRQAPWLLAASVGSQLRPVTNFLRHDAGVQRLDIVISAFPRCFLLDPDRELRPRLYAL-KKYGVTEPG--KIIETFPLVLGLDVSEQTDPVIHFWLNEIGIHRDDIPKICRAFPSLLGVDVQTMQKSIDFLREIGVQNIARFVTRLPPVLAYDVESILRPKMTFAVQN-ALSIYDVVRFPAYFSYPLDQVIEPRAAFLQ-RHRPIDHKSSDAFKTAKRVTQNKSTKRPSYTYYSNTPIPLASIGLSRVLTPSDDAFA-KLANASPQEYAKFKQRFLQQR 525          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUV8_9PHAE7.610e-25653.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXW7_ECTSI4.770e-23665.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z724_9STRA3.170e-11752.46mTERF-domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S2D3S4_9STRA8.940e-5331.10Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3YEI3_HETAK7.650e-5234.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R7Q6P9_CHOCR4.510e-4437.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
F0Y3H4_AURAN8.320e-4439.35Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2Y096_9STRA7.180e-4335.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U2R904_9STRA8.850e-4034.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3JTN4_9STRA2.620e-3828.57Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 880..911
e-value: 0.99
score: 18.4
coord: 706..737
e-value: 130.0
score: 10.7
coord: 740..772
e-value: 0.61
score: 19.1
coord: 813..844
e-value: 0.63
score: 19.1
coord: 777..808
e-value: 400.0
score: 7.0
coord: 847..879
e-value: 1.3E-5
score: 34.6
coord: 596..627
e-value: 4.3
score: 16.3
coord: 632..664
e-value: 1100.0
score: 3.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 768..928
e-value: 4.0E-24
score: 85.1
coord: 730..845
e-value: 3.8E-16
score: 58.9
coord: 580..693
e-value: 3.6E-11
score: 42.6
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 697..946
e-value: 1.7E-40
score: 140.9
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 564..643
coord: 733..847
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 676..765
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 845..931
coord: 676..765
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 564..643
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 845..931
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 733..847
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..1049
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3150110..3161530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1365.1mRNA_C-linearis_contig11.1365.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3149171..3162446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1365.1 ID=prot_C-linearis_contig11.1365.1|Name=mRNA_C-linearis_contig11.1365.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1050bp
MNRKGVKRPLPCGFGTGASPCVVARPSDNSTNNNNNNNNVRNPQSQSSLP
RHRSSSQHTQHRRRTPPLPAHKGRGGDHQHPQPKCCGCRQRWNAPSTALR
LAGVVGIQVLGLMACPCRGFTPPGLAVGPALSPDGGQRRGTAAGDFGRRA
SFACADGDSGGRDTAGSGSGASARHGRRRGRCGGAGGFGGRDGGAGGGGG
GPGSTDCRATRLPSAEGGPPLGLLYDRALLKAGMSYGVDAVGSQNGNTRN
GGNAVSSGAEESSGEGGGDSGMATATGARRDGEESVPAAAAAAAAASATA
TATAATVVEINSNKISNVAQNMTARWTSVVNGAATTAVSAATADGQSAAV
ATAAQASASAVPRKKWSGRGWLVSRAESEERQILQQLGTEPEPTAAAAAA
AGTLTPSEKELESRPDMLNGLAAGAIGVEPDLGGPSISSDSSSIVVAGAG
AAAAANATGPAVATGLPMVEGEAAEVARGMLVAAPDGGAAAAAVSAGVDL
PSSVAVGEAALQPAGQRDPNTELELGGEKADVCTAAREELTAYLLEAGAT
EELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRSTGFKGSDVAGMLA
LCPQLLALDYEGQVVPTMELLRQLGMRPTDVRRVVRKAPEVLAPRPDGST
AAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGI
KATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPKVL
CASIKGELAPRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAF
LTEDLTINKRDAAKIIRAFPSLLGLERERHMDGVVLYLKRLGVQNVGRFV
SRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEP
RTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMEN
RVSVKSGRAGAESLLSEPQRKAIGNLGGQSTTNNVSEVTARATGLPPKRR
PPQEKTQAPPPSPPSPPPSPAITQPLQRKKEGRQQQEQEQQKPEEGSRG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf