mRNA_C-linearis_contig11.1365.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A6H5KUV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV8_9PHAE) HSP 1 Score: 764 bits (1974), Expect = 7.620e-252 Identity = 570/1065 (53.52%), Postives = 655/1065 (61.50%), Query Frame = 1
Query: 256 NRKGVKRPLPCGFGTGASPCVVARPSDNSTXXXXXXXXVRNPQSQSSLPR-HRSSSQHTQHRRRTPPLPAHKGRGGDH---------QHPQPKCCG-CRQRWNAPSTA---LRLAGVVGIQVLGLMACPCRGFTPPGLAVG--PALSPDGGQRRGTAAGDFGRRASFACADGDSGGRD---TAGSGSGASAR--HGRRRGXXXXXXXXXXXXXXXXXXXXXXXSTDCRATRLPSAEGGPPLGLLYDRALLKAGMS-YGVDAVGSQN-GNTRNGGNAVSSGAEESSGEGGGDSGMATATGARRDGEESVPAAXXXXXXXXXXXXXXXXTV--VEINSNKI---SNVAQNMT-ARWTSVVNGAATTAVSAATADGQSAAVATAAQASASAVP--RKKWSGRGWLVSRAESE-ERQILQQLGTEPEPT-----AXXXXXXGTLTPSEKELESR-------PDMLNGLAAGAIGVEPD----LGG--PSISSDSSS----------IVVAGXXXXXXXNATGPAVATGLPMV----EGEAAEVARGMLVAAPDGGAAAAAVSAGVDLPSSVAVGEAALQPAGQRDPNTEL-ELGGEKADVCTAAREELTAYLLEAGATEELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRSTGFKGSDVAGMLALCPQLLALDYEGQVVPTMELLRQLGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQRKAIGNLGGQSTTNNVSEVTARATGLPPKRRP 3255
RKG+KRPLPC T S C P + V + PR H ++ Q + R QH K CG CR++ N + A LRLAGVVGI VLG MACPC+GFTPP L+ G P L+ DG Q R DF R+ +D + G + G+ +G S R GRRR S CRATRLPSAE GPP+GLLYDR LL+A + G D S N +R+G ++ + G ++S GE +A A G+ XXXXXXXXXX V V + S + +++AQ+ T +W +VV G T+ + + + +A A P RKKWSG+GWLVSRA+ E E + Q E A ++ P+ +E+ D++NG G V+ + G PS SD S XXXXXXX P V EGE A A + D +T L + GG VC A+EEL YLLEAGAT++LVA ATAALFAAEPRC+LTEGTWKRWRQNLDGLRS GF +DV MLALCPQLLALD+EGQVVPTMELLRQLGMRPTDVRRV+RKAPEVLAPRPDGSTAAEAVDVL LGLRRRHLKMEA+RWPQLL VPPGSFFQLAAFLASEEVGIK+TNI SLIRQAPWLVLQPIDGQMLPV RFLRIAGV DVER++RAYP RVRFLWSDVGVSEEDLPRVLQTFPL+FALPLSRM+DVMA XXXXXXXXXXXXXXXXXXXXX HM GVV YLKRLGVQNVGRFVSRLPPVLGYDV TNLAPKMDYLVE MGLSVYDVLTFPAYFSYPLDTVIEPRTEFL+IRGRPITLVGLNIAL QGDADFARKVA+VQPRVY++FK+AY+ R +VK+G AE LLS PQR+AIG+LGG ST+NN+S VTARATGLPP ++P
Sbjct: 83 ERKGLKRPLPCSDTTSTSGCPSPSPCSSVASRPRDDAAVGAGTEERPPPRWHNRCTRRPQRQLRQGTSXXXXXXXXXXXXXXXRCRVQHAADKVCGSCRRKNNTSAAAPSSLRLAGVVGIHVLGFMACPCQGFTPPSLSTGITPPLAADGQQSRLNTP-DFEMRSGVVDSDISARGLVPSLSVGAAAGGSLRAAKGRRR------HRGGSRRFGSGLEGDGDASGVCRATRLPSAEEGPPIGLLYDRGLLEASAAAQGADNTNSNNKSRSRDGVDSANGGVDDSGGEA-----VAAAKGSAMGXXXXXXXXXXXXXXXXXXAPPVAPAVEMVRVESTALQAENSIAQDATDTQWGNVVGGTGATSGAXXXXXXXXXXGLSRGEVAAPAPPARRKKWSGKGWLVSRAKEEAEGRTKSQNRAEATDAGLSSMAVDDDEGTSMVPAVAAVETDRDACLKDTDLVNGKDRGRREVDTRNNLAVAGADPSDRSDDSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVDEKREGEDATSLXXXXXXXXX-----------XXXXXXXXXXXXXXXXADEEDTSTGLGDTGG---GVCATAKEELALYLLEAGATDDLVAIATAALFAAEPRCSLTEGTWKRWRQNLDGLRSKGFSAADVCNMLALCPQLLALDFEGQVVPTMELLRQLGMRPTDVRRVIRKAPEVLAPRPDGSTAAEAVDVLRTLGLRRRHLKMEAMRWPQLLVVPPGSFFQLAAFLASEEVGIKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVADVERVLRAYPKVLSASIRGELAPRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFXXXXXXXXXXXXXXXXXXXXXLLGLERERHMAGVVRYLKRLGVQNVGRFVSRLPPVLGYDVETNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPITLVGLNIALHQGDADFARKVARVQPRVYQDFKKAYINKRAAVKNGLVDAEELLSGPQRRAIGSLGGLSTSNNLS-VTARATGLPPNKQP 1120
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: D7FXW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW7_ECTSI) HSP 1 Score: 694 bits (1790), Expect = 4.190e-231 Identity = 414/629 (65.82%), Postives = 454/629 (72.18%), Query Frame = 1
Query: 1339 RKKWSGRGWLVSRAESEERQILQQLGTEPEPTAXXXXXXGTLTPSEKELESRPDMLNGLAAGAIGVEPDLGGPSISSDSSSIVVAGXXXXXXXNATGPAVATGLPMVEGEAAEVARGMLVAAPDGGAAAAAVSAGVDLPSSVAVGEAALQPAGQRDPNTELELGGEKADVCTAAREELTAYLLEAGATEELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRSTGFKGSDVAGMLALCPQLLALDYEGQVVPTMELLRQLGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQRKAIGNLGGQSTTNNVSEVTAR 3225
RKKWSG+GWLVSRA ++E E R N A G + L ++ D + ++ T AV TGL EA + LV P GG P + +T EL VC +EEL YLLEAG T++LVA ATAALFAAEPRC+LTEGTWKRWRQNLDGLRS GF G+DV MLALCPQLLALD+EGQVVPTMELLRQLGMRPTDVRRV+RKAPEVLAPRPDGSTAAEAVDVL LGLRRRHLKMEA+RWPQLLAVPPGSFFQLAAFLASEEVGIK+TNI SLIRQAPWLVLQPIDGQMLPV RFLRIAGV DVER++RAYP RVRFLWSDVGVSEEDLPRVLQTFPL+FALPLSRM+DVMA XXXXXXXXXXXXXXXXXXXX HM GVV YLKRLGVQNVGRFVSRLPPVLGYDV TNLAPKMDYLVE MGLSVYDVLTFPAYFSYPLDTVIEPRTEFL+IRGRPITLVGLNIAL QGDADFARKVA+VQPRVY++FK+AY+ R +VK+G A+ LLS PQR+AIG+L G ST+NN+S V ++
Sbjct: 95 RKKWSGKGWLVSRA-------------------------------KEEAEGRAKSQNRAA----GTDAGLSSMAVDDDEGTSMMP----------TVAAVETGL-----EAGLIDTD-LVNVPSGGT---------------------ESPLADEEEDTSTELEDTGGGVCATVKEELALYLLEAGVTDDLVAIATAALFAAEPRCSLTEGTWKRWRQNLDGLRSKGFSGTDVCNMLALCPQLLALDFEGQVVPTMELLRQLGMRPTDVRRVIRKAPEVLAPRPDGSTAAEAVDVLRTLGLRRRHLKMEAMRWPQLLAVPPGSFFQLAAFLASEEVGIKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVVDVERVLRAYPKVLCASIRGELAPRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFXXXXXXXXXXXXXXXXXXXXSLLGLERERHMAGVVRYLKRLGVQNVGRFVSRLPPVLGYDVETNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPITLVGLNIALHQGDADFARKVARVQPRVYQDFKKAYINKRAAVKNGLVDAKQLLSGPQRRAIGSLEGLSTSNNLSTVPSQ 651
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A835Z724_9STRA (mTERF-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z724_9STRA) HSP 1 Score: 377 bits (968), Expect = 1.520e-114 Identity = 213/406 (52.46%), Postives = 277/406 (68.23%), Query Frame = 1
Query: 2044 MLALCPQLLALDYEGQVVPTMELLRQ-LGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIAS------LIRQAPWLVLQPIDGQMLPVTRFLRIA-GVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQR-----KAIGNLGGQSTTNNVSEVTA 3222
M PQLL + + VVP MEL+RQ LG RPTD RRV+R+AP+VL PR DGST + + L ALGL+ + + ME +RWP+LL P S +LA +L S EVG++A + S ++RQAPWL ++ Q+ PV R+L+ + G+ D++R++RAYP RV FL +VG++EED+PRV+QTFPLLFA+P+ RM+ V XXXXXXXXXXX H+ VV Y++ LG+QN+GRFVSRLPPVLGYDV+ NL PKMDYLV MGLSVYDVLTFPAYFSYPL+++IEPRTEFL +R RPI +VGLN+AL GDADFA+K+AKV+P +Y FK AYM++R V++G E LL K +G+LGG ST++NV EVT+
Sbjct: 1 MAVKMPQLLDMCFSADVVPVMELMRQELGFRPTDARRVLRRAPQVLLPRQDGSTPVDTIAALQALGLKPKMVSMEVIRWPRLLTYSPASLMELATWLGSAEVGMRAASDDSSAVSLNVLRQAPWLAEHDLETQLRPVARYLQESLGIRDMQRVLRAYPQILCCSITKDLEPRVWFLTEEVGINEEDVPRVVQTFPLLFAVPVERMRGVYGLLASELLITRXXXXXXXXXXXSLLGLEPEKHVRAVVAYMRSLGIQNIGRFVSRLPPVLGYDVSNNLMPKMDYLVAMMGLSVYDVLTFPAYFSYPLESIIEPRTEFLKLRRRPIAVVGLNMALTSGDADFAKKIAKVRPELYASFKAAYMKHRAEVQAGTMKGEDLLEMLGLDMLGGKPLGSLGGLSTSSNVQEVTS 406
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A7S2D3S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3S4_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.880e-52 Identity = 139/447 (31.10%), Postives = 207/447 (46.31%), Query Frame = 1
Query: 1987 RQNLDGLRSTGFKGSDVAGMLALCPQLLALDYEGQVVPTMELLRQ-LGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDV--------------------------------------GVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIR-GRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQRKAIGNLGGQSTTNNV 3207
R++LD L G +G D+A +L+ CP++ V T+ +L+ +R D+RR+ R P +L S E + L + L ++LK+ LRWP++L + L+ FL+ +VG K I SL+R+APWL+ ++ QM PV RFL V +E ++RAYP R+ FL D+ G++ E + +V ++FP L L H D V +L+ +GV+N+GRFV RLPPVLGYDV N+ PK +YL +++GLS YD+ FPAYFSYPLD VI PR +LS R R ++ GLN L D FA KVA Y ++ ++ + + A AE+ +E Q++ G+ G S +V
Sbjct: 116 RESLDMLGEGGLEGPDIADILSACPEISNKAQAVSAVQTLTILQNTFELRRYDLRRIARSEPTILLK----SDLTETLQALNDMKLSGKNLKLTLLRWPKILTYSTTTILNLSGFLSHPQVGFKEDQIGSLVRKAPWLLDGNLETQMGPVVRFLTKLQVRRIETVIRAYPQVLLTDVKTELLPRIEFLMKDLDLSLADASSXXXXXXXXXXXXXXXXXXXXXXXLSNDRLGIAPESVSKVFRSFPSLLGLDTVE------------------------------------HFDVSVSFLQEIGVENIGRFVLRLPPVLGYDVEINMRPKWEYLTDTLGLSTYDITRFPAYFSYPLDKVIMPRASYLSDRCNRKASIWGLNTILTLSDDAFAEKVALTSKEEYAAYRASFAKQLERARVEEA-AEAANTEVQQQQDGSSGVDSLQQSV 521
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A7S3YEI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEI3_HETAK) HSP 1 Score: 202 bits (514), Expect = 1.550e-51 Identity = 149/430 (34.65%), Postives = 214/430 (49.77%), Query Frame = 1
Query: 1864 EELTAYLLEAGATEELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRST-GFKGSDVAGMLALCPQLLALDYEGQVVPTMELLRQL----GMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-MDGVVLYLKR-LGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAG 3132
E LT +LL+AGA VA L AA +G WR NL L GF G D+A +L P LA++ + E+L L G+R ++VR+VVR+AP++LAPR DG++AA+ L +GLR R L+ + P+LLA P + F+ +AFL S++VG +A ++ +L ++APWL +P+ ++ V R+LR GV DVE + R YP + FL +VG++ V+Q +P AL L + V+A + VV YL+ LGV+ GRFVS GL +D+L FPA +YPL+ VI PRTEFL++ RP+ +GLN AL GD DFA KVA +P Y+ FK+A+ + + R G
Sbjct: 5 EPLTYFLLQAGANHAEVA---GVLSAAGAFIRAVQGN-PFWRTNLQYLLDDQGFTGQDLAQLLQAWPDFLAVECDATGYMETEVLDYLYGTVGLRRSEVRKVVRRAPQLLAPRADGTSAADTAAALALVGLRPRALRAALVAHPRLLAHTPRAVFECSAFLMSKDVGAQAAHLGALYKRAPWLPGRPV-AELRAVARWLRQIGVEDVENVFRGYPEVALRDVEELDAAFL-FLLEEVGLAPLQAALVVQAYPSALALDLGAARGVLAYLSGPELGLSAAERRRVLRAFPSLLAAPVRGGLAPVVAYLREELGVRAPGRFVSAAXXXXXXXXXXXXXXXXXXXXXXXGLGAFDLLRFPACLTYPLEEVIAPRTEFLALCRRPVGQLGLNKALAPGDDDFAAKVALTRPETYQLFKKAFRRKQQQAQRRRQG 428
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: R7Q6P9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P9_CHOCR) HSP 1 Score: 178 bits (452), Expect = 1.030e-43 Identity = 164/438 (37.44%), Postives = 234/438 (53.42%), Query Frame = 1
Query: 1984 WRQNLDGLRSTGFKGSD---VAGMLALCPQLLALDYEGQVVPTMELLRQLGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLR----IAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDV-GVSEEDLPRVLQTFPLLFALPL-SRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVKSGRAGAESLLSEPQR----KAIGNLGGQS--TTNNVSEVTARATGLPPKRR 3252
W +D L S GS +A L + P+LL L+ V L + + + RV+ + P++L +AV+ L GLR + +K RWP LL + ++ AFL + VG N+ SL+R+APW+++ I +M+P +L+ + V++ +RA P +V SDV G++ L L++FP L + + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V Y +R G+ NVGR V RLPP+LGYD++TN+ PKM+Y+ + +GLS YD+LTFP YFSY + IEPRT+FL +GR +T GLN+AL D DF +VAKV Y FK A++ R + K+ ++ E + + IG TT N S + + G KR+
Sbjct: 90 WSMLMDTLASHDINGSVLSCIAERLGV-PELLRLEPAHVVSVLHYLSTYVQLADAERNRVIIRRPDILK---SPEHLRKAVEALETSGLRLKDIKTVVQRWPGLLLLDARKINRVTAFLQTPAVGFSLPNLRSLLRRAPWVLVYDIGSEMIPAISYLKRVLDLPNRAPVDQFIRARPLLLGTSPDAMQ--KVTDFMSDVVGLTPTMLSVALRSFPPLLTCSIDATLAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNYFRRKGIINVGRIVKRLPPILGYDLDTNIIPKMEYIEQELGLSSYDILTFPGYFSYSFEKCIEPRTKFLQAKGRSVTESGLNMALGLKDEDFCVRVAKVPISQYYAFKAAFLLGRKNEKAAVEPTNDVVKESRNSNGDEEIGXXXXXXXRTTQNASRRLSNSNGKRRKRK 521
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: F0Y3H4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3H4_AURAN) HSP 1 Score: 178 bits (452), Expect = 1.430e-43 Identity = 157/399 (39.35%), Postives = 206/399 (51.63%), Query Frame = 1
Query: 2005 LRSTGFKGSDVAGMLALCPQLLALDYE-----GQVVPTMELL-RQLGMRPTDVRRVVRKAPEVLA-PRPDGS-----------------------------TAA--EAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKE 3087
L GF DV+GM+ CP+L A G V T++ L + MR D+R+VVR+ P++L P D S TAA + V +L ++G+R +H+K +RWPQLL++ + ++ S +G + +I SL R PWL+ P+ T GVT+VE +VRAYP + L GV E DL +++ FPLLF L M V+ XXXXXXXXXXXXXXXXXX M V +L+ +GV N RFV+RLPPVL YDV+ +L PKM LV+ LSVYDV+ FPAYFSYPLD VI+PRT FL G PIT L GD +FA +V V P+ Y FK+
Sbjct: 87 LEDAGFTQDDVSGMVERCPELAARGGNTSALLGDVRATVQFLSKTFAMRKYDLRKVVREQPKILLKPAADASIFDTGACPAVLAATSGGPAAGPRSGDLDATAAISDTVLLLTSVGVRTKHVKEMVVRWPQLLSIEMPQMLAVTDYINS--LGFER-SIGSLYRANPWLLAAPVATVRDAATVLRDEVGVTNVENVVRAYPRALLSDRESLLRP-LDVLRERAGVDEADLASLVEAFPLLFGLD-DAMGPVLDFWLDELKINXXXXXXXXXXXXXXXXXXVAT-MRANVKFLEGIGVVNTARFVTRLPPVLAYDVDRDLRPKMAELVKC-ALSVYDVVRFPAYFSYPLDGVIKPRTAFLKQLGVPITTFPLQALFTPGDKEFASRVLGVDPKRYAAFKK 478
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A7S2Y096_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y096_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.100e-42 Identity = 119/331 (35.95%), Postives = 182/331 (54.98%), Query Frame = 1
Query: 2155 VRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQAPWLVLQPIDGQMLPVTRFLRIAGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSD----------VGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENRVSVK 3117
V++ P+V+ PR DGST A+ + +G + + ++ P L+ PP F +++++ S++V IK + SL R+APWL+ Q ++ M V R+L G E++ RA+P FL D G+ ED+P+VL+ FP L + + D XXXXXXXXXXXXX M VV++L+ G+++VG ++RLP +LGY V+ +APK++Y E M L + ++ FPA+FSYPL+T I+ RTEFL+I G I+ VGL L D DF++KV KV P+ ++ FK +Y++ VK
Sbjct: 1 VKQIPQVMVPRKDGSTIADTIKAFGMIGFKGKSFLNTVMQHPSLILHPPLQVFLVSSYMMSKQVRIKRNGLGSLYRKAPWLLDQNVED-MRKVGRWLTNIGXXXXEQVFRAHPEVLLQNIKQTLDRVYNFLVDDSDFDKGTGGGAGLDPEDVPQVLELFPRLLSAGMPEHID-RVRHYMRSVGIPDXXXXXXXXXXXXXLTLDIEDMQQVVVFLRGAGMESVGEMLTRLPSILGYSVSA-IAPKLEYFTEYMDLEIEELERFPAFFSYPLET-IQTRTEFLAILGNSISGVGLRRVLTPSDDDFSKKVVKVNPKFFQLFKNSYLKGGSKVK 327
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A6U2R904_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2R904_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.610e-39 Identity = 138/395 (34.94%), Postives = 191/395 (48.35%), Query Frame = 1
Query: 1978 KRWRQNLDGLRSTGFKGSDVAGMLALCPQLLALDYEGQVVPTME-----LLRQLGMRPTDVRRVVRKAPEVLAPRPDGSTAAEAVDVLCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKATNIASLIRQ-----------------------------APWLVLQPIDG---QMLPVTRFLRIA-GVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPITLVGLNIALQQGDADFARKV 3048
+R + + L S G G D A + P L AL +G V +E L + LG+R D R+V+R P +L P+ ++AA+ VD+L +LG+ R L + P LL+ P S F+LAAFLAS V + + L+R+ LV + ID +M LR GV DV ++V A+P VRFL +V + +ED+P+VL+ FP L + + +++ +A XXXXXXXXX M V+ +L +GV N+GRFV+RLPP+LGY V L PK Y E G +DV+ FPA FSYP D +I R E+L R P VGL+ L GD DFAR V
Sbjct: 239 ERIERVFEQLFSAGLTGKDCAAVFIHTPSL-ALSKDGNVSEGVECAMRLLCQTLGLRRYDSRKVIRTCPGLLTPQ-GANSAAQIVDMLSSLGVSRSALARDKTSLPSLLSRQPSSLFRLAAFLASNLVRLPTDKVGPLLRRHGSSSLLNSVVPLEYSLKLQANENVGEAIVSRLVREEIDDAYRRMKLSAEVLREEFGVDDVAKVVTAFPDVLLLDSPTQIAPVVRFLRDEVYLKDEDIPKVLEAFPTLLSADVEQLRKRVAFLGSLDIVPDNLSKXXXXXXXXXFLDVST-QMIPVIQFLVEIGVVNLGRFVTRLPPILGYSVERELRPKWQYFKE-FGFDYFDVVRFPATFSYPFDRIIVTRFEYLKTRNIPPKAVGLDKILSSGDTDFARIV 629
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Match: A0A7S3JTN4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTN4_9STRA) HSP 1 Score: 162 bits (411), Expect = 4.450e-38 Identity = 142/497 (28.57%), Postives = 215/497 (43.26%), Query Frame = 1
Query: 1867 ELTAYLLEAGATEELVATATAALFAAEPRCTLTEGTWKRWRQNLDGLRSTGFKGSDVAGMLALCP-QLLALDYEGQVVPTMELL-RQLGMRPTDVRRVVRKAPEVLAPRPDGS-------------------------TAAEAVDV-------LCALGLRRRHLKMEALRWPQLLAVPPGSFFQLAAFLASEEVGIKA--------------TNIASLIRQAPWLVLQPIDGQMLPVTRFLRI-AGVTDVERIVRAYPXXXXXXXXXXXXXRVRFLWSDVGVSEEDLPRVLQTFPLLFALPLSRMQDVMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMDGVVLYLKRLGVQNVGRFVSRLPPVLGYDVNTNLAPKMDYLVESMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLSIRGRPI-----------------------------------TLVGLNIALQQGDADFARKVAKVQPRVYREFKEAYMENR 3105
EL LLE GA+E V T A + P ++ EG + + L GF G ++A +L P QL A + +++ L + G++ ++RR+ + P++L +P S + VD+ L +G R R +K +RWPQ+L + + FL+S VG +++L RQAPWL+ + Q+ PVT FLR AGV ++ ++ A+P R+ L GV+E ++++TFPL+ L +S D + M + +L+ +GVQN+ RFV+RLPPVL YDV + L PKM + V++ LS+YDV+ FPAYFSYPLD VIEPR FL R RPI +GL+ L D FA K+A P+ Y +FK+ +++ R
Sbjct: 41 ELREILLEGGASETEV-TEMAMKLGSIPGESIIEGAYLA----AEALTKRGFSGGEIATILGQSPRQLCAPGAVDDIAASLDFLSEEAGLKNRELRRIAKLRPQILVKKPKLSVFRDTGACPAVLATVAGGPIFNIRNSTCSPVDIIRDIIFFLQGVGFRDRRIKELLVRWPQILTIEMPQLLAVTDFLSSN-VGFSTPALREKYPQFYQNTAPLSALYRQAPWLLAASVGSQLRPVTNFLRHDAGVQRLDIVISAFPRCFLLDPDRELRPRLYAL-KKYGVTEPG--KIIETFPLVLGLDVSEQTDPVIHFWLNEIGIHRDDIPKICRAFPSLLGVDVQTMQKSIDFLREIGVQNIARFVTRLPPVLAYDVESILRPKMTFAVQN-ALSIYDVVRFPAYFSYPLDQVIEPRAAFLQ-RHRPIDHKSSDAFKTAKRVTQNKSTKRPSYTYYSNTPIPLASIGLSRVLTPSDDAFA-KLANASPQEYAKFKQRFLQQR 525 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1365.1 >prot_C-linearis_contig11.1365.1 ID=prot_C-linearis_contig11.1365.1|Name=mRNA_C-linearis_contig11.1365.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1050bp MNRKGVKRPLPCGFGTGASPCVVARPSDNSTNNNNNNNNVRNPQSQSSLPback to top mRNA from alignment at C-linearis_contig11:3149171..3162446- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1365.1 ID=mRNA_C-linearis_contig11.1365.1|Name=mRNA_C-linearis_contig11.1365.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=13276bp|location=Sequence derived from alignment at C-linearis_contig11:3149171..3162446- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:3149171..3162446- >mRNA_C-linearis_contig11.1365.1 ID=mRNA_C-linearis_contig11.1365.1|Name=mRNA_C-linearis_contig11.1365.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6300bp|location=Sequence derived from alignment at C-linearis_contig11:3149171..3162446- (Chordaria linearis ClinC8C monoicous)back to top |