prot_C-linearis_contig11.1359.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: D7FM66_ECTSI (WRNEXO (WERNER SYNDROME-LIKE EXONUCLEASE) 3\'-5\' exonuclease/ nucleic acid binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM66_ECTSI) HSP 1 Score: 277 bits (709), Expect = 7.740e-85 Identity = 158/259 (61.00%), Postives = 186/259 (71.81%), Query Frame = 0
Query: 243 GILLAGVGVGGDVSRLEREYEQLRASG-VGGVVDLSEVAKRKVVPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPDLVLRRAEANAPRRD-TTAVVVPPSSSTITGDAAGSGGKGKVEVEVKAKIEKKGCQQPALGGK--ATSSSDANDANKGSPTSRVRPRLPQSKLETHRLWHEDGLPVDAVAELRCNKASTVRGYLSDCIEAGLPYD-----WSRLGIDPTK 492
G+L + GVGGDV+RLEREY+QLRA G VGGVVDLSEVAKRKV P+RRRRGMWSLADLC E+L+LEL+KP+SLRTGSWEK+PLSVDQLFYAAADA+AG RLWQ M MPDLVL+R++AN PR + T+A P + AAG GKG+ V A QPA G+ AT+S +A RPRLP SKLETHRLWHEDGL VDAVAE+RCNKA+TVRGYLS + GL D W+ L +D ++
Sbjct: 3 GLLCSRRGVGGDVNRLEREYDQLRAGGGVGGVVDLSEVAKRKVAPERRRRGMWSLADLCAEVLELELKKPASLRTGSWEKRPLSVDQLFYAAADAYAGLRLWQTMHEMPDLVLQRSDANGPRVEGTSAAAGSPRRCDVNAAAAGGEGKGQARGGVDA--------QPAXXGQEMATASRNAETT--------TRPRLPLSKLETHRLWHEDGLSVDAVAEVRCNKANTVRGYLSADLPNGLIVDRLHRSWASLRLDTSR 245
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: A0A6H5KKF2_9PHAE (HTH_40 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF2_9PHAE) HSP 1 Score: 187 bits (475), Expect = 2.950e-49 Identity = 171/430 (39.77%), Postives = 210/430 (48.84%), Query Frame = 0
Query: 346 MRGMPDLVLRRAEANAPR-RDTTAVVVPPSSSTITGDAAGSGGKGKVEVEVKAKIEKKGCQQPALGGK--ATSSSDANDANKGSPTSRVRPRLPQSKLETHRLWHEDGLPVDAVAELRCNKASTVRGYLSDCIEAGLPYDWSRLGIDPTKEGKIVGALLAATADHPPAATGRDPTTASATR--GKNKDKEPGASSCGSGSDGKNPAAPSACGAKPQTVPLAPSGSPVGGLQAAVLFPPTLA--------ATGTPGSCG-STSAAAAVGTAEGQRWEERGGNGPRSANVAKLRGVTPTAADMESECGYISEKGAHGDSTNG------------------------------GXXXXXXXNEAGAAR--VAPRAGAEDGAEGAKG-----AGET---GRWDSVRLKEVKELAPTAEYWEIRMVLARLKAGWC 721
M MPDLVL+R++AN R DT+A P T AA S GKG+ V A+ PA GG+ AT+S +A RPRLP SKLETHRLWHEDGL VDAVAE+RCNKA+TVRGYLSDCIEAGLPYDW+R+GID +E +IV ALLAATA +G+ P A+A G +K P ASS +P P AK + + + SP+ + A P+L+ TP + G S A VGT+ G TPT ++ C ++ A S +G G N + + AG DG G G A ET GRWDSVRLK+VKELAP AEYWEIRMVLARLK+G+C
Sbjct: 1 MHEMPDLVLQRSDANGSRVEDTSAAAGSPRRCDGTAAAACSEGKGQARGGVDAR--------PARGGQEMATASRNAETT--------TRPRLPLSKLETHRLWHEDGLSVDAVAEVRCNKANTVRGYLSDCIEAGLPYDWTRVGIDADEEEEIVTALLAATAG-----SGKQPAVAAAGGDCGPSKAAAPAASS------ETSPKIPDHHKAKAEATNVGVAVSPM--MPLASNSRPSLSDLQVDDGIGLATPTTSGRSAPAVEPVGTSCGHN-------------------TTPTTPVLKGPCSAVAAAAAASHSADGVVLXXXXXXXXXXXXXXXXXXXXXXXXXXDGSATSSTANNRTDSNPGMDESAGWSDGDAGRHGTLAGTASETCAAGRWDSVRLKDVKELAPRAEYWEIRMVLARLKSGYC 382
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: A0A7S0A073_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A073_9DINO) HSP 1 Score: 105 bits (263), Expect = 8.930e-22 Identity = 93/288 (32.29%), Postives = 127/288 (44.10%), Query Frame = 0
Query: 238 VLSDPGILLAGVGVGGDVSRLEREYE---------------QLRASGVG-----GVVDLSEVAKRKVVPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPDLVLRRAEANAPRRDTTAVVVPPSSSTITGDAAGSGGKGKVEVEVKAKIEKKGCQQPALGGKATSSSDANDANKGSPTSRVRPRLPQSKLETHRLWHEDGLPVDAVAELRCNKASTVRGYLSDCIEAGLPYDWSRLGIDPTKEGKIVGALLAATA 505
+L P +L GVG GD +LER+Y Q G G GV+DL+++A R + R SLA LC+ELL L KP+ +R +WE PL+ +QL YAA DA+AG R +Q +R V+ A A R+DT +P + S A C+ +G A S LP +K +RL+ E+GL D++AELR + STV YL+D I AG Y+ + I I AL AA A
Sbjct: 5 LLGRPDVLKVGVGAEGDAHKLERDYPWAGAPAACEKGGSEAQCHDPGRGRFRARGVLDLNDLACRVLGGKPGSRPKASLAALCEELLGCSLPKPADVRCSNWEAVPLTEEQLGYAATDAWAGLRCFQELRARSPEVVAEV-ATALRKDT----IPMAHSARKRPAPAEW-----------------CKSEQVGAVAVPSD-----------------LPPAKRCVYRLFFENGLAADSIAELRGIQTSTVLSYLADAITAGYAYNLADFEISAADWEAIAAALAAAPA 253
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: A0A1Y1IE41_KLENI (Werner syndrome-like exonuclease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IE41_KLENI) HSP 1 Score: 103 bits (258), Expect = 2.960e-19 Identity = 81/278 (29.14%), Postives = 124/278 (44.60%), Query Frame = 0
Query: 225 HPAAAYLPESLVQVLSDPGILLAGVGVGGDVSRLEREYEQLRASGVGGVVDLSEVAKRKVVPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPDLVLRRAEANAPRRDTTAVVVPPSSSTITGDAAGSGGKGKVEVEVKAKIEKKGCQQPALGGKATSSSDANDANKGSPTSRVRPRLPQSKLETHRLWHEDGLPVDAVAELRCNKASTVRGYLSDCIEAGLPYDWSRLGIDPTKEGKIVGALLA 502
H A + L SL +L + + AG G+ GD +L R++ +GG+ DLS++A ++ P R WSL L E + ++ KP R WE+ PLS DQ YAA DA+A RL+QV+ +P R P+ + ++V P G + E + A +P+ L SK++ HRL H DGL ++ +A + + +TV YL + +AGL Y W RLG+ +I A+ A
Sbjct: 369 HIAHSGLTSSLRALLDEQSVGKAGAGIYGDAQKLRRDF----GVSMGGLRDLSDLANERLQPKDGPR-KWSLTALAQEAMLQQVEKPPKQRISDWERLPLSPDQRQYAATDAYASLRLYQVLMSLPAPPPRPILRPLPQSELNSLVNP-GFXXXPXXELXPGAEPTSEAWIPA------VPEPSY-------------------------LAPSKMDVHRL-HLDGLTIEEIAVKKGVRVTTVESYLVEATQAGLAYAWHRLGVSDAVRERIERAVKA 608
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: A0A2Z6P1B5_TRISU (3'-5' exonuclease domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P1B5_TRISU) HSP 1 Score: 94.4 bits (233), Expect = 8.980e-19 Identity = 50/122 (40.98%), Postives = 77/122 (63.11%), Query Frame = 0
Query: 231 LPESLVQVLSDPGILLAGVGVGGDVSRLEREYEQLRASGVGGVVDLSEVAKRKVVPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPDL 352
+P++L +L DP +L G G+GGD +++ R+Y+ + GV DLS A +K+ D + W LA L ++LL +L+KPS +R G+WE LS +QL YAA DAFA L+Q ++ +PD+
Sbjct: 34 IPQNLQLLLEDPTVLKVGAGIGGDATKVSRDYD----ISIKGVEDLSFHANQKLGGDPHK---WGLASLTEKLLSKQLKKPSKIRMGNWETPFLSKEQLEYAATDAFASWFLYQTIKDLPDV 148
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: A0A7S0ZVH3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZVH3_NOCSC) HSP 1 Score: 100 bits (248), Expect = 2.030e-18 Identity = 91/282 (32.27%), Postives = 125/282 (44.33%), Query Frame = 0
Query: 231 LPESLVQVLSDPGILLAGVGVGGDVSRLEREYEQLRASGVG-----GVVDLSEVAKRKV---VPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPDLVLRRAEANAPRRDTTAVVVPPSSSTITGDAAGSGGKGKVEVEV--KAKIEKKGCQQPALGGKATSSSDANDANKGSPTSRVRPRLPQSKLETHRLWHEDGLPVDAVAELRCNKASTVRGYLSDCIEAGLPYDWSRLGIDPTKEGKIVGALLA 502
LP L +L++ ++ GVG GD +L +Y G VVDL+EVA R + P R R SL LC ELL L K +R G+WE PLS Q+ YAA DA+AG R ++V+ + AP+ ++ A S GKG+ K K GC + +A++ D LP +K HRL+ E+GL D++AELR +A TVR YL+D I AG YD + + I A A
Sbjct: 217 LPGPLAALLANEDVIKVGVGAEGDAHKLAADYSLKVIDGTSPFRARSVVDLNEVAWRALHGAQPGTRERK--SLRTLCFELLSQNLAKDEEVRCGNWEAVPLSQTQVDYAATDAWAGYRCFEVLHSL-----------APKSLDASL------------ATSSFGKGEPSAPCVRKRKAPGDGCTSEPVA-EASTILD----------------LPPAKRLCHRLFCENGLTADSIAELRGVQAGTVRSYLADAIAAGHAYDLADFELSADDRTAITVAFAA 456
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: A0A2Z6NBE9_TRISU (3'-5' exonuclease domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NBE9_TRISU) HSP 1 Score: 94.4 bits (233), Expect = 1.120e-16 Identity = 50/122 (40.98%), Postives = 77/122 (63.11%), Query Frame = 0
Query: 231 LPESLVQVLSDPGILLAGVGVGGDVSRLEREYEQLRASGVGGVVDLSEVAKRKVVPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPDL 352
+P++L +L DP +L G G+GGD +++ R+Y+ + GV DLS A +K+ D + W LA L ++LL +L+KPS +R G+WE LS +QL YAA DAFA L+Q ++ +PD+
Sbjct: 327 IPQNLQLLLEDPTVLKVGAGIGGDATKVSRDYD----ISIKGVEDLSFHANQKLGGDPHK---WGLASLTEKLLSKQLKKPSKIRMGNWETPFLSKEQLEYAATDAFASWFLYQTIKDLPDV 441
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: V4MI48_EUTSA (3'-5' exonuclease domain-containing protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4MI48_EUTSA) HSP 1 Score: 91.3 bits (225), Expect = 1.550e-16 Identity = 48/123 (39.02%), Postives = 77/123 (62.60%), Query Frame = 0
Query: 231 LPESLVQVLSDPGILLAGVGVGGDVSRLEREYEQLRASGVGGVVDLSEVAKRKVVPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPDLV 353
+P+SL Q++ D ++ G+G+ GD +L ++ + V DLS++A +K+ D ++ W LA L + L+ EL KP+ +R G+WE QPLS +QL YAA DA+A L+QV++ +PD V
Sbjct: 169 IPQSLQQLIEDSTLVKVGIGIDGDSVKLFHDH----GVSIKDVEDLSDLANKKIGGDSKK---WGLASLTETLVCKELLKPNRIRLGNWEVQPLSKEQLQYAATDAYASWHLYQVLKELPDAV 284
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: A0A2K1JPS4_PHYPA (3'-5' exonuclease domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JPS4_PHYPA) HSP 1 Score: 92.0 bits (227), Expect = 3.670e-16 Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 231 LPESLVQVLSDPGILLAGVGVGGDVSRLEREYEQLRASGVGGVVDLSEVAKRKVVPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPDLV 353
+P SL +L DP IL GVG+ GDVS+L+R+Y+ + GVV+LSE+A +K+ R WSL+ L L ++ K ++R G WE PLS QL YAA DAFA L+Q++ P +
Sbjct: 279 IPSSLYAILEDPTILKTGVGIHGDVSKLQRDYKLK----IQGVVNLSEIANQKL----GRWQSWSLSSLSQALTCKQVEKVPNIRCGDWEACPLSPPQLQYAATDAFASLYLYQILESFPSRI 393
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Match: A0A396IWX4_MEDTR (Putative DNA helicase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396IWX4_MEDTR) HSP 1 Score: 88.6 bits (218), Expect = 1.860e-15 Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 0
Query: 231 LPESLVQVLSDPGILLAGVGVGGDVSRLEREYEQLRASGVGGVVDLSEVAKRKVVPDRRRRGMWSLADLCDELLQLELRKPSSLRTGSWEKQPLSVDQLFYAAADAFAGSRLWQVMRGMPD 351
+P +L +L D +L G G+GGD S++ R+Y + GV DLS A +K+ + W LA L ++LL +L+KPS +R G+WE LS +QL YAA DAFA L+Q ++ +PD
Sbjct: 181 IPRNLQLLLEDSSVLKVGAGIGGDASKVSRDY----FISIKGVEDLSYHANQKLGGGPNK---WGLASLTEKLLSKQLKKPSKIRMGNWETPYLSKEQLEYAATDAFASWFLYQTIKDLPD 294 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig11.1359.1 ID=prot_C-linearis_contig11.1359.1|Name=mRNA_C-linearis_contig11.1359.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=726bpback to top |