prot_C-linearis_contig11.1358.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig11.1358.1
Unique Name	prot_C-linearis_contig11.1358.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	229

Homology

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: A0A6H5KVN5_9PHAE (HIT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVN5_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.020e-76
Identity = 137/206 (66.50%), Postives = 155/206 (75.24%), Query Frame = 0

Query:   26 RVVAAASLVRAASGRGPSWLGRADLAFAVQTQRASPFLSSCTSRA-WSSRIGSGITPSARIATVLRHMSATPGGEEEKAKAVAAAGGDGAGE--TIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            R +A AS +R AS R  + +G +DLAF V  +RA P  S+   RA  +S     ITP +RIATV+R+MS+ PG                     TIFDKIISK IPADIIHED+LCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAV+SNKALLGHLMF+AQKVA+EQGLD+GFRVVVNDG QGCQTVYHLH+HVIGGRQL WPPG
Sbjct:    3 RAIATASFIRVASLRSFAVVG-SDLAFGV-VKRAPPPSSAWIGRASCTSSSSCRITPRSRIATVIRNMSSNPGXXXXXXXXXXXXXXXXXXXEATIFDKIISKEIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIGGRQLKWPPG 206

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: A0A5B8MF15_9CHLO (Histidine triad family protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MF15_9CHLO)

HSP 1 Score: 195 bits (495), Expect = 1.990e-60
Identity = 94/134 (70.15%), Postives = 112/134 (83.58%), Query Frame = 0

Query:   97 GGEEEKAKAVAAAGG--DGAGETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            GG EE A   AAA G  D  G TIFDK+ISK IPAD+I+EDD CLAF+DI+PQAPVHFLVIPK+RDGLT+LSKA + +K +LGHL++ AQKVA+++GL +GFRV +NDG  GCQ+VYHLHLHVIGGRQL WPPG
Sbjct:    2 GGNEEAAAKQAAAEGLVDNEGPTIFDKVISKEIPADVIYEDDKCLAFRDINPQAPVHFLVIPKARDGLTRLSKAHEGHKDILGHLLYTAQKVAKDEGLGEGFRVAINDGPGGCQSVYHLHLHVIGGRQLTWPPG 135

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: A0A7S1SQN7_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQN7_9CHLO)

HSP 1 Score: 190 bits (482), Expect = 1.400e-58
Identity = 84/122 (68.85%), Postives = 107/122 (87.70%), Query Frame = 0

Query:  107 AAAGGDGAGETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            AAA  D  G TIFDKI++K IPAD+I+EDDLCLAF+D++PQAP HFLVIPK+R GLTQLSKAV+++K LLGHL+++AQ VA+++GL +GFR+V+NDG  GCQ+VYHLH+H +GGRQL WPPG
Sbjct:    5 AAADADKEGPTIFDKIVAKEIPADVIYEDDLCLAFRDVNPQAPTHFLVIPKARSGLTQLSKAVEAHKGLLGHLIYVAQDVAKKEGLGEGFRLVINDGPNGCQSVYHLHIHCLGGRQLTWPPG 126

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: A0A7S2HQ92_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2HQ92_9DINO)

HSP 1 Score: 188 bits (477), Expect = 1.070e-57
Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = 0

Query:   98 GEEEKAKAVAAAGGDGAGE-TIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQ-GFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            GEEEKAKA AAAG DGA + T+FDKI++K +PA +++EDD  LAF+DISPQAP H LVIPK R GLT L KA   +KALLGHLM +A  VA+++GLD+ GFRVVVNDGAQGCQ+V+HLHLH++GGRQ+ WPPG
Sbjct:    3 GEEEKAKAAAAAGDDGAPKVTLFDKIVAKEVPATVVYEDDEALAFRDISPQAPTHILVIPKDRQGLTHLHKATAEHKALLGHLMVVASTVAKQEGLDKDGFRVVVNDGAQGCQSVFHLHLHILGGRQMKWPPG 135

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: A0A061SGY2_9CHLO (Histidine triad (HIT) family protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SGY2_9CHLO)

HSP 1 Score: 189 bits (481), Expect = 1.280e-57
Identity = 89/129 (68.99%), Postives = 109/129 (84.50%), Query Frame = 0

Query:  100 EEKAKAVAAAGGDGAGETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            E++A   AAA  D  G TIFDKIISK IPAD+I+EDD CLAF+DI+PQAP HFLVIPK R+GL++LS A D++K LLGHLMF+AQ+VA+++ L +GFRVV+NDG  GCQ+VYHLHLHV+GGRQL WPPG
Sbjct:   56 EQEAALKAAADADKGGPTIFDKIISKEIPADVIYEDDQCLAFRDINPQAPTHFLVIPKVRNGLSRLSNASDAHKPLLGHLMFVAQEVAKQEKLAEGFRVVINDGPNGCQSVYHLHLHVLGGRQLTWPPG 184

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: A0A836C9C8_9STRA (14 kDa zinc-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C8_9STRA)

HSP 1 Score: 186 bits (473), Expect = 4.340e-57
Identity = 91/136 (66.91%), Postives = 110/136 (80.88%), Query Frame = 0

Query:   92 MSATPGGEEEKAKAVAAAGGDGAGETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPP 227
            MS++   E + AKA A A       T+FDKI  K IP+DII+EDD CLAF DISPQAPVHFLVIPK R+G++QLS A + NK LLGHLM++AQ VA++QGL++GFRVVVNDG +GCQ+VYHLHLHV+GGRQLAWPP
Sbjct:    1 MSSSGSKEVDAAKAAAEAPKPAV--TLFDKIAQKQIPSDIIYEDDKCLAFNDISPQAPVHFLVIPKDREGMSQLSTATEDNKPLLGHLMYVAQLVAKQQGLERGFRVVVNDGKEGCQSVYHLHLHVVGGRQLAWPP 134

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: I0Z0W6_COCSC (HIT-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0W6_COCSC)

HSP 1 Score: 187 bits (475), Expect = 9.450e-57
Identity = 90/134 (67.16%), Postives = 110/134 (82.09%), Query Frame = 0

Query:   99 EEEKAKAVAAAGGDGAGE----TIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            EE+ AK  AA+G D A +    TIFDKIISK IPA+II+ED+  LAF+DI+PQAPVHFLVIPK RDGLTQLSK  DS++ +LGHL+ +A KVA ++GL+ GFRVV+NDG  GCQ+VYHLHLH++GGRQL WPPG
Sbjct:   48 EEQAAKNAAASGADAAADQGAPTIFDKIISKQIPANIIYEDESALAFRDINPQAPVHFLVIPKHRDGLTQLSKCNDSHEKVLGHLLVVASKVALQEGLNDGFRVVINDGVNGCQSVYHLHLHIVGGRQLTWPPG 181

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: E1Z2V2_CHLVA (HIT domain-containing protein n=2 Tax=Chlorella TaxID=3071 RepID=E1Z2V2_CHLVA)

HSP 1 Score: 183 bits (465), Expect = 6.430e-56
Identity = 87/130 (66.92%), Postives = 109/130 (83.85%), Query Frame = 0

Query:   99 EEEKAKAVAAAGGDGAGETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            E EKA+A A+A   GA  TIFDKII+K IPA II+ED+  LAF+DISPQ PVHFLVIPK R+GLTQLSKA + +K LLGHL+++A +VA+++GL QG+RV +NDG  GCQ+VYHLHLH+IGGRQ++WPPG
Sbjct:    4 EAEKAQAAASAADTGA-PTIFDKIIAKQIPAQIIYEDEQALAFRDISPQGPVHFLVIPKVRNGLTQLSKAKEEHKPLLGHLLYVAAQVAKQEGLSQGYRVAINDGPNGCQSVYHLHLHIIGGRQMSWPPG 132

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: A0A388K5I6_CHABU (HIT domain-containing protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388K5I6_CHABU)

HSP 1 Score: 186 bits (472), Expect = 8.570e-56
Identity = 86/139 (61.87%), Postives = 107/139 (76.98%), Query Frame = 0

Query:   90 RHMSATPGGEEEKAKAVAAAGGDGAGETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            R  +   G  EE A A   A  D    TIFDKI+ K IP   ++EDD CLAFKDISPQAPVH ++IPK RDGLTQLSKA + +K +LGHL+++AQ VA++QGLD+GFR+V+NDGAQGCQ+VYHLH+H+IGGR + WPPG
Sbjct:   80 RRFTVAMGNSEEAAAATNVALKDTGAPTIFDKIVKKEIPCTSVYEDDKCLAFKDISPQAPVHIVLIPKERDGLTQLSKAEERHKDILGHLLYVAQLVAKQQGLDEGFRIVINDGAQGCQSVYHLHIHIIGGRMMKWPPG 218

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BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Match: A0A150GQH3_GONPE (HIT domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GQH3_GONPE)

HSP 1 Score: 182 bits (462), Expect = 1.890e-55
Identity = 90/131 (68.70%), Postives = 105/131 (80.15%), Query Frame = 0

Query:   98 GEEEKAKAVAAAGGDGAGETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVVNDGAQGCQTVYHLHLHVIGGRQLAWPPG 228
            GEE  AKA A    D    TIFDKI++K IPA II+EDD  LAF+DISPQAPVHFLVIPK+R GLT+LSKA + +KALLGHL+F+AQKVA  + L +GFRV +NDG  GCQ+VYHLHLHV+GGRQL WPPG
Sbjct:    4 GEEAAAKAAAHLA-DQDPPTIFDKIVAKQIPATIIYEDDQALAFRDISPQAPVHFLVIPKNRSGLTRLSKATEEHKALLGHLLFVAQKVAMAENLGEGFRVTINDGPNGCQSVYHLHLHVMGGRQLTWPPG 133

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot

BLAST of mRNA_C-linearis_contig11.1358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVN5_9PHAE	1.020e-76	66.50	HIT domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A5B8MF15_9CHLO	1.990e-60	70.15	Histidine triad family protein n=1 Tax=Chloropicon...	[more]
A0A7S1SQN7_9CHLO	1.400e-58	68.85	Hypothetical protein n=1 Tax=Tetraselmis chuii Tax...	[more]
A0A7S2HQ92_9DINO	1.070e-57	68.42	Hypothetical protein n=1 Tax=Alexandrium andersoni...	[more]
A0A061SGY2_9CHLO	1.280e-57	68.99	Histidine triad (HIT) family protein (Fragment) n=...	[more]
A0A836C9C8_9STRA	4.340e-57	66.91	14 kDa zinc-binding protein n=1 Tax=Tribonema minu...	[more]
I0Z0W6_COCSC	9.450e-57	67.16	HIT-domain-containing protein n=1 Tax=Coccomyxa su...	[more]
E1Z2V2_CHLVA	6.430e-56	66.92	HIT domain-containing protein n=2 Tax=Chlorella Ta...	[more]
A0A388K5I6_CHABU	8.570e-56	61.87	HIT domain-containing protein n=2 Tax=Chara brauni...	[more]
A0A150GQH3_GONPE	1.890e-55	68.70	HIT domain-containing protein n=1 Tax=Gonium pecto...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001310	Histidine triad (HIT) protein	PRINTS	PR00332	HISTRIAD	coord: 208..218 score: 61.09 coord: 139..157 score: 69.05 coord: 118..134 score: 51.53
IPR001310	Histidine triad (HIT) protein	PFAM	PF01230	HIT	coord: 125..222 e-value: 3.8E-26 score: 91.7
IPR036265	HIT-like superfamily	GENE3D	3.30.428.10		coord: 99..228 e-value: 3.2E-38 score: 132.8
IPR036265	HIT-like superfamily	SUPERFAMILY	54197	HIT-like	coord: 115..227
None	No IPR available	PANTHER	PTHR23089	HISTIDINE TRIAD HIT PROTEIN	coord: 87..228
None	No IPR available	PANTHER	PTHR23089:SF33	HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1	coord: 87..228
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..228
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..29
IPR019808	Histidine triad, conserved site	PROSITE	PS00892	HIT_1	coord: 201..219
IPR011146	HIT-like domain	PROSITE	PS51084	HIT_2	coord: 118..228 score: 14.71

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig11	contig	C-linearis_contig11:3094024..3096496 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig11.1358.1	mRNA_C-linearis_contig11.1358.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig11 3093951..3098135 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig11.1358.1 ID=prot_C-linearis_contig11.1358.1|Name=mRNA_C-linearis_contig11.1358.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=229bp
MLGQLRRLSCPPAALAIALFRLCDRRVVAAASLVRAASGRGPSWLGRADL
AFAVQTQRASPFLSSCTSRAWSSRIGSGITPSARIATVLRHMSATPGGEE
EKAKAVAAAGGDGAGETIFDKIISKAIPADIIHEDDLCLAFKDISPQAPV
HFLVIPKSRDGLTQLSKAVDSNKALLGHLMFIAQKVAREQGLDQGFRVVV
NDGAQGCQTVYHLHLHVIGGRQLAWPPG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001310	Histidine_triad_HIT
IPR036265	HIT-like_sf
IPR019808	Histidine_triad_CS
IPR011146	HIT-like