prot_C-linearis_contig11.1356.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1356.1
Unique Nameprot_C-linearis_contig11.1356.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length141
Homology
BLAST of mRNA_C-linearis_contig11.1356.1 vs. uniprot
Match: D8LKM8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM8_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 6.690e-38
Identity = 67/84 (79.76%), Postives = 72/84 (85.71%), Query Frame = 0
Query:   23 QPRQVRYQCGLCSQSYAATVTGNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDVSFMDWDGDTSD 106
            +PR+VRYQCG C+ SYAATV+GNPWWLLVRQECP CHKMQIPRVDILNPTNNVE HIAFLTE      SDGD S MDWDG+TSD
Sbjct:  327 EPREVRYQCGACAASYAATVSGNPWWLLVRQECPICHKMQIPRVDILNPTNNVESHIAFLTE----NASDGDGSCMDWDGETSD 406          
BLAST of mRNA_C-linearis_contig11.1356.1 vs. uniprot
Match: A0A6H5KT72_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT72_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.210e-21
Identity = 48/59 (81.36%), Postives = 49/59 (83.05%), Query Frame = 0
Query:   48 WLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDVSFMDWDGDTSD 106
            WLLVRQECP CHKMQIPRVDILNPTNNVE HIAFLTE      SDGD S MDWDG+TSD
Sbjct:  477 WLLVRQECPTCHKMQIPRVDILNPTNNVESHIAFLTE----NASDGDGSCMDWDGETSD 531          
BLAST of mRNA_C-linearis_contig11.1356.1 vs. uniprot
Match: A0A835YXC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 5.160e-8
Identity = 33/86 (38.37%), Postives = 48/86 (55.81%), Query Frame = 0
Query:   10 KRRRSSVLPAALLQPRQVRYQCGLCSQSYAATVTGNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDV 95
            KR RSS++P  L + R+V Y+C LC + YAAT++ NPWW LV            PR+DI  P N ++ H   L+    ++  +GD 
Sbjct:  196 KRPRSSLMPV-LTKEREVWYECALCKEHYAATISCNPWWALV------------PRIDIALPVNGID-HAQVLSACADDSDMEGDT 267          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKM8_ECTSI6.690e-3879.76TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KT72_9PHAE1.210e-2181.36TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YXC4_9STRA5.160e-838.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3081478..3083359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1356.1mRNA_C-linearis_contig11.1356.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3081469..3083359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1356.1 ID=prot_C-linearis_contig11.1356.1|Name=mRNA_C-linearis_contig11.1356.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=141bp
MLLVPPRPSKRRRSSVLPAALLQPRQVRYQCGLCSQSYAATVTGNPWWLL
VRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDVSFMDW
DGDTSDDNSGDESGDERDAQGSSAGGGGGGGTVNGGDGGSG
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