prot_C-linearis_contig11.1352.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1352.1
Unique Nameprot_C-linearis_contig11.1352.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length145
Homology
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: D7FM60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM60_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 8.290e-39
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0
Query:   67 MMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 144
            MMRLFLASKGNKAEQ+NPL MSLGLAVP+ILLYAF LALQTYVLRLDVI+AVIGLVFVG EGLLSVGTAVSFYHAFRG
Sbjct:    1 MMRLFLASKGNKAEQINPLAMSLGLAVPVILLYAFSLALQTYVLRLDVIMAVIGLVFVGLEGLLSVGTAVSFYHAFRG 78          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A7R9YFX6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFX6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.960e-36
Identity = 67/140 (47.86%), Postives = 92/140 (65.71%), Query Frame = 0
Query:    5 DDHRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 144
            D ++  LSSLPL+VL+YFN WFS+ FF LA+  + YK Y ++Y   +   ++++ F    V+  RLFLASKGNK E    L+  + L  PI + YA+ L LQTYVLRLDV++  +GL FVG EGL+ + T V F  A+RG
Sbjct:    5 DYYKRSLSSLPLQVLVYFNGWFSTLFFLLALALFLYKRYSFFYAGNSFAWDLTMLFFLSVVDFARLFLASKGNKTEHAGALLWFICLTAPICVGYAYLLTLQTYVLRLDVVLCSLGLAFVGLEGLIGIFTCVQFMRAYRG 144          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A6U4EE63_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EE63_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.330e-36
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 0
Query:    7 HRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 144
            +R  LSSLPL++L+YFN WFS+ FF L I  + YK Y  YY       ++++ FL   ++ +RLFL SKGNK E    L+  + L VPI + YA+ L LQTYVLR+DV++  +GL+FVGFE L+S+ T V F  A+RG
Sbjct:   11 YRRSLSSLPLQILVYFNGWFSTMFFLLGIALFLYKRYNLYYAGNGFGWDLAMLFLMTVLDALRLFLGSKGNKTEHAGALMWFIFLTVPICVGYAYLLTLQTYVLRIDVVLCSLGLIFVGFECLISIFTCVQFLRAYRG 148          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A7S1CJJ7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJJ7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.720e-29
Identity = 62/140 (44.29%), Postives = 91/140 (65.00%), Query Frame = 0
Query:    5 DDHRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 144
            D +  I SSLPL+V L+FN+ ++  FF +      YK  ++ +PS A   E+++ F Y  VE+ RL+LAS GNK EQ++P+V ++  AVP++    F L  QTYVLR+D I+ V+ LVFVGFE   S+ T ++FY + RG
Sbjct:    3 DAYNDIKSSLPLQVALHFNRPYAYMFFLIGFVEAVYKGIKFPFPSSAYGAEMAMLFAYIFVELSRLWLASMGNKTEQISPIVWAVAFAVPVVAYNIFNLTSQTYVLRIDQILNVVSLVFVGFEVFFSLITMLTFYRSGRG 142          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A1V9ZL49_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL49_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.720e-28
Identity = 61/135 (45.19%), Postives = 89/135 (65.93%), Query Frame = 0
Query:   10 ILSSLPLEVLLYFNQWFSSCFFALAICTYAYKA-YRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFR 143
            +LSSLPLEVLL+FN+WFS  + A++   + YKA Y  Y P+GA   E+    LY  ++ +R+F ASKGNK EQ+ PL+ +  L +P ++  ++ ++LQTYVLR+DV++  IGLVFVG E +    T +    A R
Sbjct:    5 LLSSLPLEVLLFFNRWFSHVYIAISAVVFVYKAMYLPYPPTGAFTWEVLFLGLYYLIDQVRIFQASKGNKTEQVFPLLTACLLTLPCVVSLSYYISLQTYVLRVDVVLNAIGLVFVGLESIFGPITTLRLLRASR 139          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: UPI00112AF3F6 (transmembrane protein 216 isoform X1 n=3 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112AF3F6)

HSP 1 Score: 109 bits (272), Expect = 1.450e-27
Identity = 61/136 (44.85%), Postives = 85/136 (62.50%), Query Frame = 0
Query:    8 RAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFR 143
            R ILSS PLE+LL+ N W+ + +F L I  + YK     YP+  L L++ + FLY  +E++R+F  SKGN  ++  PL +SLGL VP  ++  + L LQTYVLRL+ IV VI L+F   E LLS+   +SF    R
Sbjct:   11 RGILSSTPLEILLFLNGWYYATYFVLEILIFVYKGLILPYPTANLTLDLVMLFLYLGIEVIRIFYGSKGNLLQRKMPLTISLGLTVPAAMMAVYYLLLQTYVLRLEAIVNVILLIFYALELLLSIVALISFSRKIR 146          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A6P7Y2F1_9AMPH (transmembrane protein 216 isoform X1 n=3 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7Y2F1_9AMPH)

HSP 1 Score: 107 bits (268), Expect = 5.670e-27
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    8 RAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSF 138
            RA+LSS PLE+LL+ N W+ + +F L I  + YK     YP+  L L+I + FLY  +E++R+F  SKGN  ++  PL +SLGL +P  ++  + L LQTYVLRL+ IV +I LVF   E LLS+   +SF
Sbjct:   27 RAVLSSTPLEILLFLNGWYYATYFLLEILIFVYKGLILPYPTANLTLDIVMLFLYLGIEVIRIFYGSKGNLLQRKMPLTISLGLMIPAAVMAVYYLLLQTYVLRLEAIVNIILLVFYALELLLSIVALMSF 157          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A8J5X7D2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7D2_DIALT)

HSP 1 Score: 104 bits (259), Expect = 7.450e-26
Identity = 56/137 (40.88%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    7 HRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFR 143
            H+ +LSSLPL+VLL+FN W+   +  +A+  Y YK  R  YP+  L LEI    +   +E  RL LAS+GNK E + P+  +LGL++P+   Y + L  Q +VLRLD ++ +I +V +  E LL   TA+ F+ + R
Sbjct:    4 HQPMLSSLPLQVLLFFNGWYDLVYVVVALIEYIYKGSRLPYPASVLGLEIFGILMVALIEPCRLLLASRGNKTESIGPIAWNLGLSLPLFGAYTYYLRFQAFVLRLDQVLNIIAIVILAVEWLLGAITALVFWQSRR 140          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A836CJL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 8.710e-26
Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 0
Query:   58 LTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 144
            + F+Y  ++  R+F+ASKGNK E L PL  S  LA P+ LLYA+ LALQTYVL+LDV++A IGLVFVG E LLS  TAV+FY+AFRG
Sbjct:    1 MVFVYAVLQATRVFMASKGNKTETLEPLAASALLAAPVALLYAYALALQTYVLQLDVVLAAIGLVFVGLETLLSATTAVAFYNAFRG 87          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A7S3RB10_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3RB10_DUNTE)

HSP 1 Score: 105 bits (262), Expect = 1.150e-25
Identity = 57/136 (41.91%), Postives = 90/136 (66.18%), Query Frame = 0
Query:    8 RAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFR 143
            R +L+SL L++L++F+ W++  ++ L I  + YK     YP    ++E S  +LY  +E+ RLFL +KGNKAEQ+ P+V SL LA+P++ +YA+ +  QTYVL++D+I+  I L F+G + LLS+  A  F  A R
Sbjct:   62 RRVLTSLTLQILIFFSIWWNCFYYVLNILVFVYKGLVLPYPQQNFDMEFSFAWLYIILEIPRLFLVTKGNKAEQVVPIVFSLILALPLLAMYAYFIDFQTYVLKIDLILNGIALGFIGLQVLLSIFAAYRFATATR 197          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM60_ECTSI8.290e-3992.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YFX6_9STRA3.960e-3647.86Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4EE63_9STRA6.330e-3648.55Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1CJJ7_9STRA1.720e-2944.29Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1V9ZL49_9STRA3.720e-2845.19Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
UPI00112AF3F61.450e-2744.85transmembrane protein 216 isoform X1 n=3 Tax=Rhina... [more]
A0A6P7Y2F1_9AMPH5.670e-2745.80transmembrane protein 216 isoform X1 n=3 Tax=Gymno... [more]
A0A8J5X7D2_DIALT7.450e-2640.88Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A836CJL2_9STRA8.710e-2662.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3RB10_DUNTE1.150e-2541.91Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019184Uncharacterised protein family, transmembrane-17PFAMPF09799Transmemb_17coord: 18..123
e-value: 1.2E-24
score: 86.9
IPR019184Uncharacterised protein family, transmembrane-17PANTHERPTHR13531FAMILY NOT NAMEDcoord: 8..140
NoneNo IPR availablePANTHERPTHR13531:SF5TRANSMEMBRANE PROTEIN 216coord: 8..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..139
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3034083..3036315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1352.1mRNA_C-linearis_contig11.1352.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3034083..3036315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1352.1 ID=prot_C-linearis_contig11.1352.1|Name=mRNA_C-linearis_contig11.1352.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=145bp
MSRPDDHRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSG
ALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYA
FGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019184Uncharacterised_TM-17