mRNA_C-linearis_contig11.1352.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1352.1
Unique NamemRNA_C-linearis_contig11.1352.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: D7FM60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM60_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 8.290e-39
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 1
Query:  199 MMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 432
            MMRLFLASKGNKAEQ+NPL MSLGLAVP+ILLYAF LALQTYVLRLDVI+AVIGLVFVG EGLLSVGTAVSFYHAFRG
Sbjct:    1 MMRLFLASKGNKAEQINPLAMSLGLAVPVILLYAFSLALQTYVLRLDVIMAVIGLVFVGLEGLLSVGTAVSFYHAFRG 78          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A7R9YFX6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFX6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.960e-36
Identity = 67/140 (47.86%), Postives = 92/140 (65.71%), Query Frame = 1
Query:   13 DDHRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 432
            D ++  LSSLPL+VL+YFN WFS+ FF LA+  + YK Y ++Y   +   ++++ F    V+  RLFLASKGNK E    L+  + L  PI + YA+ L LQTYVLRLDV++  +GL FVG EGL+ + T V F  A+RG
Sbjct:    5 DYYKRSLSSLPLQVLVYFNGWFSTLFFLLALALFLYKRYSFFYAGNSFAWDLTMLFFLSVVDFARLFLASKGNKTEHAGALLWFICLTAPICVGYAYLLTLQTYVLRLDVVLCSLGLAFVGLEGLIGIFTCVQFMRAYRG 144          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A6U4EE63_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EE63_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.330e-36
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 1
Query:   19 HRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 432
            +R  LSSLPL++L+YFN WFS+ FF L I  + YK Y  YY       ++++ FL   ++ +RLFL SKGNK E    L+  + L VPI + YA+ L LQTYVLR+DV++  +GL+FVGFE L+S+ T V F  A+RG
Sbjct:   11 YRRSLSSLPLQILVYFNGWFSTMFFLLGIALFLYKRYNLYYAGNGFGWDLAMLFLMTVLDALRLFLGSKGNKTEHAGALMWFIFLTVPICVGYAYLLTLQTYVLRIDVVLCSLGLIFVGFECLISIFTCVQFLRAYRG 148          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A7S1CJJ7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJJ7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.720e-29
Identity = 62/140 (44.29%), Postives = 91/140 (65.00%), Query Frame = 1
Query:   13 DDHRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 432
            D +  I SSLPL+V L+FN+ ++  FF +      YK  ++ +PS A   E+++ F Y  VE+ RL+LAS GNK EQ++P+V ++  AVP++    F L  QTYVLR+D I+ V+ LVFVGFE   S+ T ++FY + RG
Sbjct:    3 DAYNDIKSSLPLQVALHFNRPYAYMFFLIGFVEAVYKGIKFPFPSSAYGAEMAMLFAYIFVELSRLWLASMGNKTEQISPIVWAVAFAVPVVAYNIFNLTSQTYVLRIDQILNVVSLVFVGFEVFFSLITMLTFYRSGRG 142          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A1V9ZL49_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL49_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.720e-28
Identity = 61/135 (45.19%), Postives = 89/135 (65.93%), Query Frame = 1
Query:   28 ILSSLPLEVLLYFNQWFSSCFFALAICTYAYKA-YRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFR 429
            +LSSLPLEVLL+FN+WFS  + A++   + YKA Y  Y P+GA   E+    LY  ++ +R+F ASKGNK EQ+ PL+ +  L +P ++  ++ ++LQTYVLR+DV++  IGLVFVG E +    T +    A R
Sbjct:    5 LLSSLPLEVLLFFNRWFSHVYIAISAVVFVYKAMYLPYPPTGAFTWEVLFLGLYYLIDQVRIFQASKGNKTEQVFPLLTACLLTLPCVVSLSYYISLQTYVLRVDVVLNAIGLVFVGLESIFGPITTLRLLRASR 139          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: UPI00112AF3F6 (transmembrane protein 216 isoform X1 n=3 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112AF3F6)

HSP 1 Score: 109 bits (272), Expect = 1.450e-27
Identity = 61/136 (44.85%), Postives = 85/136 (62.50%), Query Frame = 1
Query:   22 RAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFR 429
            R ILSS PLE+LL+ N W+ + +F L I  + YK     YP+  L L++ + FLY  +E++R+F  SKGN  ++  PL +SLGL VP  ++  + L LQTYVLRL+ IV VI L+F   E LLS+   +SF    R
Sbjct:   11 RGILSSTPLEILLFLNGWYYATYFVLEILIFVYKGLILPYPTANLTLDLVMLFLYLGIEVIRIFYGSKGNLLQRKMPLTISLGLTVPAAMMAVYYLLLQTYVLRLEAIVNVILLIFYALELLLSIVALISFSRKIR 146          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A6P7Y2F1_9AMPH (transmembrane protein 216 isoform X1 n=3 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7Y2F1_9AMPH)

HSP 1 Score: 107 bits (268), Expect = 5.670e-27
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 1
Query:   22 RAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSF 414
            RA+LSS PLE+LL+ N W+ + +F L I  + YK     YP+  L L+I + FLY  +E++R+F  SKGN  ++  PL +SLGL +P  ++  + L LQTYVLRL+ IV +I LVF   E LLS+   +SF
Sbjct:   27 RAVLSSTPLEILLFLNGWYYATYFLLEILIFVYKGLILPYPTANLTLDIVMLFLYLGIEVIRIFYGSKGNLLQRKMPLTISLGLMIPAAVMAVYYLLLQTYVLRLEAIVNIILLVFYALELLLSIVALMSF 157          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A8J5X7D2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7D2_DIALT)

HSP 1 Score: 104 bits (259), Expect = 7.450e-26
Identity = 56/137 (40.88%), Postives = 84/137 (61.31%), Query Frame = 1
Query:   19 HRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFR 429
            H+ +LSSLPL+VLL+FN W+   +  +A+  Y YK  R  YP+  L LEI    +   +E  RL LAS+GNK E + P+  +LGL++P+   Y + L  Q +VLRLD ++ +I +V +  E LL   TA+ F+ + R
Sbjct:    4 HQPMLSSLPLQVLLFFNGWYDLVYVVVALIEYIYKGSRLPYPASVLGLEIFGILMVALIEPCRLLLASRGNKTESIGPIAWNLGLSLPLFGAYTYYLRFQAFVLRLDQVLNIIAIVILAVEWLLGAITALVFWQSRR 140          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A836CJL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 8.710e-26
Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 1
Query:  172 LTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG 432
            + F+Y  ++  R+F+ASKGNK E L PL  S  LA P+ LLYA+ LALQTYVL+LDV++A IGLVFVG E LLS  TAV+FY+AFRG
Sbjct:    1 MVFVYAVLQATRVFMASKGNKTETLEPLAASALLAAPVALLYAYALALQTYVLQLDVVLAAIGLVFVGLETLLSATTAVAFYNAFRG 87          
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Match: A0A7S3RB10_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3RB10_DUNTE)

HSP 1 Score: 105 bits (262), Expect = 1.150e-25
Identity = 57/136 (41.91%), Postives = 90/136 (66.18%), Query Frame = 1
Query:   22 RAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSGALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYAFGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFR 429
            R +L+SL L++L++F+ W++  ++ L I  + YK     YP    ++E S  +LY  +E+ RLFL +KGNKAEQ+ P+V SL LA+P++ +YA+ +  QTYVL++D+I+  I L F+G + LLS+  A  F  A R
Sbjct:   62 RRVLTSLTLQILIFFSIWWNCFYYVLNILVFVYKGLVLPYPQQNFDMEFSFAWLYIILEIPRLFLVTKGNKAEQVVPIVFSLILALPLLAMYAYFIDFQTYVLKIDLILNGIALGFIGLQVLLSIFAAYRFATATR 197          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM60_ECTSI8.290e-3992.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YFX6_9STRA3.960e-3647.86Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4EE63_9STRA6.330e-3648.55Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1CJJ7_9STRA1.720e-2944.29Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1V9ZL49_9STRA3.720e-2845.19Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
UPI00112AF3F61.450e-2744.85transmembrane protein 216 isoform X1 n=3 Tax=Rhina... [more]
A0A6P7Y2F1_9AMPH5.670e-2745.80transmembrane protein 216 isoform X1 n=3 Tax=Gymno... [more]
A0A8J5X7D2_DIALT7.450e-2640.88Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A836CJL2_9STRA8.710e-2662.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3RB10_DUNTE1.150e-2541.91Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3034083..3036315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score102.4
Seed ortholog evalue1.8e-19
Seed eggNOG ortholog112098.XP_008610741.1
Preferred nameTMEM80
KEGG koko:K19385
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Predicted membrane protein
EggNOG OGs2SDH1@2759,KOG4502@1
Ec32 ortholog descriptionUncharacterised protein family, transmembrane-17
Ec32 orthologEc-16_004970.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons4
Model size435
Cds size435
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1352.1prot_C-linearis_contig11.1352.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 3034083..3036315 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927462.7513952-CDS-C-linearis_contig11:3034082..30342571622927462.7513952-CDS-C-linearis_contig11:3034082..3034257Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3034083..3034257 -
1690879714.9939046-CDS-C-linearis_contig11:3034082..30342571690879714.9939046-CDS-C-linearis_contig11:3034082..3034257Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3034083..3034257 -
1622927462.7689953-CDS-C-linearis_contig11:3034733..30348231622927462.7689953-CDS-C-linearis_contig11:3034733..3034823Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3034734..3034823 -
1690879715.0123112-CDS-C-linearis_contig11:3034733..30348231690879715.0123112-CDS-C-linearis_contig11:3034733..3034823Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3034734..3034823 -
1622927462.781898-CDS-C-linearis_contig11:3035349..30354681622927462.781898-CDS-C-linearis_contig11:3035349..3035468Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3035350..3035468 -
1690879715.0260067-CDS-C-linearis_contig11:3035349..30354681690879715.0260067-CDS-C-linearis_contig11:3035349..3035468Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3035350..3035468 -
1622927462.7935302-CDS-C-linearis_contig11:3036264..30363151622927462.7935302-CDS-C-linearis_contig11:3036264..3036315Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3036265..3036315 -
1690879715.0416837-CDS-C-linearis_contig11:3036264..30363151690879715.0416837-CDS-C-linearis_contig11:3036264..3036315Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 3036265..3036315 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1352.1

>prot_C-linearis_contig11.1352.1 ID=prot_C-linearis_contig11.1352.1|Name=mRNA_C-linearis_contig11.1352.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=145bp
MSRPDDHRAILSSLPLEVLLYFNQWFSSCFFALAICTYAYKAYRYYYPSG
ALELEISLTFLYGAVEMMRLFLASKGNKAEQLNPLVMSLGLAVPIILLYA
FGLALQTYVLRLDVIVAVIGLVFVGFEGLLSVGTAVSFYHAFRG*
back to top

mRNA from alignment at C-linearis_contig11:3034083..3036315-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1352.1 ID=mRNA_C-linearis_contig11.1352.1|Name=mRNA_C-linearis_contig11.1352.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2233bp|location=Sequence derived from alignment at C-linearis_contig11:3034083..3036315- (Chordaria linearis ClinC8C monoicous)
ATGTCCCGCCCGGACGATCACCGAGCAATCCTATCGTCTCTACCGCTCGA GGTGTGTGTGTGTGTGTGAGGGCATTCAGACTGCAGCGCATTCCTGAAGG TCAACAGCTTGGTGTATCTCTACGCACTCGTATTCCAGTTCAACCAGCGA TTCAGCCGACGCGGAGTCCGCCTTAAGACCTTGGTTCGCCAGGGTACCAC AGGATACGTTGATGCCAGTTCGAAACTTATCCCCGAATGTTGGTACTGCA CGTCGAGATACACGTAGCCGCAGCTGCCCCATAGAGATCAGGATGTTTGA GCTACAAATAAAGGAGACACATCTTGTACTACGTCTTCGGCCGCGATCGT GAAACTGTCGGTGATGTACGTACGTACCAGTATTTTATTTTTTATTATTT TTTCTCGCCCATAAGACTTTAGTCTACAATAATAATAGTTTCATGTTTTT TCGTAGCCTGCCTCCTCCTCCTCTTCACAACTAGCTAGGCTACCATCCGG GGTCACCCAGGAGAGGATATCTCCACCTACCTCCTGCGGTGCATGCCTCT GATGCTTTTTATCGCGAGCAGGGTTCATTACTCCCCACCCTCGTCAACAA TGAAGTCGAAAGTATTTACTCCGGAGTATTTACTAACAACAAGCTTGCAG CAAGTTTCAATGTACCAGAACGAAAGTGAGAAAAAAACTCACTTGGTCGG GACTCGAACCCATGACCTGGCGCTTAGTAGACTGCGTGTGTACATACGAG ACCGCCCGGGCGACCGGAATGGTCGCCACCGAAGAAACAGCTGTTTGGCC TGCCCTTTTCACGACCGACAACTACCAACATGCCGCTCGTTCCACAGGTA CTTCTTTATTTCAACCAATGGTTTAGCTCGTGTTTTTTTGCCCTGGCGAT CTGCACGTATGCCTACAAGGCATATCGATACTACTACCCAAGTGGGGCGT TGGAACTAGAAATCAGGTGAGAGCACACCACCGTCTTGTTCATTTCTTGT TCTTTTGGACTATGCTCTTGGTGTACATGCGCGTGGTCCAGCACCCTCGA ACGGTCGCGTACAACCCCGGTCCAGATTGAGCTACGTAGGTCGGGAGAGC GAGACCACCTGTGTTGCTGACCAACCGATTCCATACCCTGTACGCAGAGT TCATGTACAGCAGTCTGGTCGCCCCAGGTCAAGCGAATACCCGAAGCGGT CTGCAGCATCTGCGCTTGTGAGCATCTTCTTGTTTGAAGTCATATGCATC GTCTCTCGGTTCCATTTTGTTGTGCTCTTTGGTGCAATCACACGGTCGAT GGAAAACAGAACAGGGAAGGTTATGGAATAGAGGGAAGAAGCCGTGTAGG TTTCATATAACTCGTGCGAACGCCACGCCTCGACCGGCGACAGGACTTGA TACTGCTGCTGTACTATTTCCACGCACACATGATCCAACCAACCCCACGA CAACCGGGGGGGCGGGTGCAACCGGACCGTCCGGTGGAGCAGCCTGACCT TCCTTTACGGGGCAGTCGAGATGATGCGTCTCTTTCTAGCATCCAAGGGA AACAAGGCGGAACAACTTAACCCTCTTGTGATGTGAGTACCCTTGCTCTT GCACATCGTGGTATTTTTCCTGTAGGACGGTAGCTAGTCTAGTTTGTGTA GAGGATGGCAGCATACACTACATATGGAACTGAGCGAGAAAACCATGGTG CTCTCTTCCGTCTCGACAAGGACGCGTAGTCGTTGGTCAAACGTGACCAG ACAAGCTCCGTGTAACATATGGATGCTAGAAGCCTAAGTTTAATGTCGTC TACGCACGCAGGATCAACTCCCCCTTGCTACCACTGTCAGATTTATTTAC GACATGAAGGATCGGAGCAGGTTGGTTTTGCAGTGAAGCGCAAAGGGCTA TTTACGTAGTAGATCTCTGCGGAACAAGTACACCATGGACGACCGTCCCA GTGCCAAACGCCAAATGCGAGCGAGTGCATCCTTAAAAACCAACACCGGC TGCTGCGCGTTGACTACTTCCCCTCCCCCGGACTTGGATATGATTTGCCA ATTAACAGGTCTCTCGGCCTCGCGGTGCCCATCATACTTCTCTACGCATT TGGCCTGGCTCTCCAGACGTATGTTTTGAGGCTTGACGTGATCGTGGCGG TCATTGGGCTGGTATTCGTGGGTTTTGAAGGCTTGCTTAGCGTTGGAACG GCGGTTTCATTTTATCACGCCTTCCGAGGCTAA
back to top

Coding sequence (CDS) from alignment at C-linearis_contig11:3034083..3036315-

>mRNA_C-linearis_contig11.1352.1 ID=mRNA_C-linearis_contig11.1352.1|Name=mRNA_C-linearis_contig11.1352.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at C-linearis_contig11:3034083..3036315- (Chordaria linearis ClinC8C monoicous)
ATGTCCCGCCCGGACGATCACCGAGCAATCCTATCGTCTCTACCGCTCGA
GATGTCCCGCCCGGACGATCACCGAGCAATCCTATCGTCTCTACCGCTCG
AGGTACTTCTTTATTTCAACCAATGGTTTAGCTCGTGTTTTTTTGCCCTG
GCGATCTGCACGTATGCCTACAAGGCATATCGATACTACTACCCAAGTGG
GGCGTTGGAACTAGAAATCAGGTACTTCTTTATTTCAACCAATGGTTTAG
CTCGTGTTTTTTTGCCCTGGCGATCTGCACGTATGCCTACAAGGCATATC
GATACTACTACCCAAGTGGGGCGTTGGAACTAGAAATCAGCCTGACCTTC
CTTTACGGGGCAGTCGAGATGATGCGTCTCTTTCTAGCATCCAAGGGAAA
CAAGGCGGAACAACTTAACCCTCTTGTGATCCTGACCTTCCTTTACGGGG
CAGTCGAGATGATGCGTCTCTTTCTAGCATCCAAGGGAAACAAGGCGGAA
CAACTTAACCCTCTTGTGATGTCTCTCGGCCTCGCGGTGCCCATCATACT
TCTCTACGCATTTGGCCTGGCTCTCCAGACGTATGTTTTGAGGCTTGACG
TGATCGTGGCGGTCATTGGGCTGGTATTCGTGGGTTTTGAAGGCTTGCTT
AGCGTTGGAACGGCGGTTTCATTTTATCACGCCTTCCGAGGCTAAGTCTC
TCGGCCTCGCGGTGCCCATCATACTTCTCTACGCATTTGGCCTGGCTCTC
CAGACGTATGTTTTGAGGCTTGACGTGATCGTGGCGGTCATTGGGCTGGT
ATTCGTGGGTTTTGAAGGCTTGCTTAGCGTTGGAACGGCGGTTTCATTTT
ATCACGCCTTCCGAGGCTAA
back to top