prot_C-linearis_contig11.1339.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1339.1
Unique Nameprot_C-linearis_contig11.1339.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length159
Homology
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A6H5L9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M4_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 6.400e-62
Identity = 107/158 (67.72%), Postives = 122/158 (77.22%), Query Frame = 0
Query:    1 MGCLMCYGSKVGWYHRVFLPVIVLELSGGQG-SIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAVAACPRPGWLLAAASAALV 157
            MGCLMCYGSK+GWYHRVFLPVIVLEL+ G+G SIWGA+DLCALCMVA           GLC AHL+RP +  D+ LARRGL F+LCFGDF+EAA YPF+ERCRCCN GA+ GSA+SGA VA        STAYLPLP+AVAAC +P WLL A SAA +
Sbjct:  314 MGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAA----------GLCVAHLLRPTSPVDLTLARRGLIFNLCFGDFIEAA-YPFMERCRCCNAGAYLGSAVSGAFVAVGGVA---STAYLPLPVAVAACSKPWWLLGATSAAFL 457          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A7S3PUF6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUF6_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.080e-24
Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 0
Query:    1 MGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 139
            +GC+ CYG+KVGWYH +FLP I+LE+  G+ S WG++D C L +V+           G+CAA+ +  G      L +R L  +L  GDF+E A YP++ + +  N+  +  S +S A++         S+AYLP+PL++
Sbjct:   22 VGCIFCYGAKVGWYHSIFLPGILLEMESGEMSTWGSVDECTLVLVSA----------GICAANTLTSGDA----LPKRALRINLTCGDFIEVA-YPYMSKSKTVNIAGYLASGVSTAILYSKQPSNVMSSAYLPMPLSL 145          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A7S1USB9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USB9_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.150e-24
Identity = 60/149 (40.27%), Postives = 86/149 (57.72%), Query Frame = 0
Query:    1 MGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHL-VRP---------GTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 139
            MGC  CYGSKVG+YH ++LP+I++E+  G  S+WG +D C L +V+           G+CA +L V P         G + DV L RRGL  +L +GDF+EAA YPF+ER    N+  +  S +S  ++         S AYLPLP+++
Sbjct:  382 MGCFSCYGSKVGYYHALWLPIILIEMEFGSASLWGTIDECTLVLVSA----------GICAGNLAVNPRTPSDDHGQGVETDVALCRRGLRINLLYGDFIEAA-YPFMERSVVVNVAGYLASGISTELLTGNPTDVL-SMAYLPLPVSI 518          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A448YX11_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YX11_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.650e-23
Identity = 62/139 (44.60%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    1 MGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 139
            +GCL CYGSKVGWYH +FLP+I++E+  G  S+ GA+D+ AL +V            G+C   LV  G   D  LARRG+  +L +GDFVEA  YP  E+    N   +A SALS A++         S+AYLP P AV
Sbjct:  428 LGCLFCYGSKVGWYHSIFLPLILIEMELGDPSMLGALDVLALVLVCA----------GVCLGLLVT-GNGEDKGLARRGMTTNLLYGDFVEAY-YPHAEKYPLVNAAGYAASALSSAILTTDCR----SSAYLPFPAAV 550          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: D7FXW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW3_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.580e-22
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0
Query:    1 MGCLMCYGSKVGWYHRVFLPVIVLELSGGQG-SIWGAMDLCALCMVA 46
            MGCLMCYGSK+GWYHRVFLPVIVLEL+ G+G SIWGA+DLCALCMVA
Sbjct:    1 MGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVA 47          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A7S4IXA2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IXA2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.950e-22
Identity = 58/152 (38.16%), Postives = 84/152 (55.26%), Query Frame = 0
Query:    2 GCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLV-----------RPGTK---ADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 139
            GC  CYGSKVGWYH  FLP+I++E+  G+GSIWGA+D C L +V+           G+C A++V            P  +   +D  ++ RGL  +L  GDF+EAA YPF+ER    N  A+  S +S  ++          +AYLP+ L++
Sbjct:   64 GCFFCYGSKVGWYHSFFLPIILVEMECGEGSIWGAVDECTLVLVSA----------GICTANIVYSWLFRKKSESMPPQRLHNSDHDVSLRGLKINLLCGDFIEAA-YPFMERSVIVNAFAYLASGVSTEILFRERADNVLGSAYLPVMLSL 204          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A7S1BV93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BV93_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.480e-21
Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 0
Query:    2 GCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLV-RPGTKA-----DVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPL 135
            GC   YGSKVGWYH +FLP+I++E+  G+GS WGA+D C L +++           G+CAA+++  P  K      DV +++R L  ++  GDF+EAA YPF+ER    NL A+    ++  ++         S+AYLP+
Sbjct:  158 GCTYIYGSKVGWYHMIFLPIILIEMEHGEGSTWGAIDECVLVLISA----------GICAANIMCHPRVKGVIKKGDVAISKRALKTNIFCGDFIEAA-YPFMERSVTINLCAYLAGGIATEIIYQSPHQVL-SSAYLPV 285          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: B7GAH2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAH2_PHATC)

HSP 1 Score: 98.2 bits (243), Expect = 6.930e-21
Identity = 59/166 (35.54%), Postives = 86/166 (51.81%), Query Frame = 0
Query:    1 MGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPG--------TKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAVAACPRPGWLLAAASAALVY 158
            +GC  CYGSKVGWYH V LP+I++E+  G  S+ GA+D   L +V+           G+CAA+++           + AD+ L RRG   ++  GDFVEA  YP +E     N+  +  S LS A +         S AYLPLP+A+       W+  A +A + +
Sbjct:  382 LGCFCCYGSKVGWYHSVILPLILIEMELGDASVLGAVDELTLVLVSA----------GICAANVLYSTLHSRQDHLSTADIDLCRRGFFLNIACGDFVEAC-YPLMENRLAVNVSGYLASGLSTAWLVASSSQTPKSLAYLPLPIAIGVS-ETNWVQMAVAACIAF 535          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A1E7EUU6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUU6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.750e-20
Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 0
Query:    1 MGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 139
            +GCL CYGSK+GWYH +FLP+I++E+  G  S+ GA+D   L +V+           G+C   ++  G+  +  LARRG+A +L  GDF+E   YP +E+    N+  +  S++S AV+         S+AY+P P+A+
Sbjct:  389 LGCLFCYGSKIGWYHSIFLPIILVEMEIGDASMLGALDFLTLVLVSA----------GICLG-IILTGSTEERSLARRGIATNLLCGDFIEVC-YPHMEQHYLVNISGYVASSVSVAVLTGGCR----SSAYMPFPVAI 511          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: B8LCQ5_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCQ5_THAPS)

HSP 1 Score: 96.7 bits (239), Expect = 2.920e-20
Identity = 59/148 (39.86%), Postives = 81/148 (54.73%), Query Frame = 0
Query:    2 GCLMCYGSKVGWYHRVFLPVIVLELSG----GQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLV------RPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 139
            GC+  YGSKVGWYH +FLP+I+LE+      G  S+ GAMD C L M+            G+CA++L       + G   +  LA + L  ++C GDF+EAA YPF+ER +  N  A+    L+  ++         STAY PLPLAV
Sbjct: 1430 GCIFVYGSKVGWYHSLFLPLILLEMDSSKELGAASLLGAMDECTLVMICA----------GICASNLTFAPGKRKTGGGGERSLAWQALKTNICCGDFIEAA-YPFMERSQLVNASAYIAGGLASELLMQRRVL---STAYFPLPLAV 1563          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5L9M4_9PHAE6.400e-6267.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3PUF6_9STRA1.080e-2437.41Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1USB9_9STRA5.150e-2440.27Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A448YX11_9STRA2.650e-2344.60Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
D7FXW3_ECTSI1.580e-2287.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4IXA2_9STRA1.950e-2238.16Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1BV93_9STRA1.480e-2138.57Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
B7GAH2_PHATC6.930e-2135.54Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1E7EUU6_9STRA1.750e-2037.41Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
B8LCQ5_THAPS2.920e-2039.86Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2887985..2889082 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1339.1mRNA_C-linearis_contig11.1339.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2887201..2889387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1339.1 ID=prot_C-linearis_contig11.1339.1|Name=mRNA_C-linearis_contig11.1339.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=159bp
MGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMV
VPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVER
CRCCNLGAHAGSALSGAVVAAAAGGGPPSTAYLPLPLAVAACPRPGWLLA
AASAALVY*
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