mRNA_C-linearis_contig11.1339.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1339.1
Unique NamemRNA_C-linearis_contig11.1339.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A6H5L9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M4_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 3.610e-63
Identity = 114/170 (67.06%), Postives = 131/170 (77.06%), Query Frame = 2
Query:  407 QTA*IKAVVGAGMGCLMCYGSKVGWYHRVFLPVIVLELSGGQG-SIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAVAACPRPGWLLAAASAALV 913
            QT  I+A+VGA MGCLMCYGSK+GWYHRVFLPVIVLEL+ G+G SIWGA+DLCALCMVA           GLC AHL+RP +  D+ LARRGL F+LCFGDF+EAA YPF+ERCRCCN GA+ GSA+SGA VA        STAYLPLP+AVAAC +P WLL A SAA +
Sbjct:  302 QTTWIQALVGAAMGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVAA----------GLCVAHLLRPTSPVDLTLARRGLIFNLCFGDFIEAA-YPFMERCRCCNAGAYLGSAVSGAFVAVGGVA---STAYLPLPVAVAACSKPWWLLGATSAAFL 457          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A7S3PUF6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUF6_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.820e-23
Identity = 54/147 (36.73%), Postives = 85/147 (57.82%), Query Frame = 2
Query:  419 IKAVVGAGMGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 859
            + A  G  +GC+ CYG+KVGWYH +FLP I+LE+  G+ S WG++D C L +V+           G+CAA+ +  G      L +R L  +L  GDF+E A YP++ + +  N+  +  S +S A++         S+AYLP+PL++
Sbjct:   14 LSAAYGFLVGCIFCYGAKVGWYHSIFLPGILLEMESGEMSTWGSVDECTLVLVSA----------GICAANTLTSGDA----LPKRALRINLTCGDFIEVA-YPYMSKSKTVNIAGYLASGVSTAILYSKQPSNVMSSAYLPMPLSL 145          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A7S1USB9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USB9_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.010e-22
Identity = 62/153 (40.52%), Postives = 88/153 (57.52%), Query Frame = 2
Query:  431 VGAGMGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHL-VRP---------GTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 859
            VG  MGC  CYGSKVG+YH ++LP+I++E+  G  S+WG +D C L +V+           G+CA +L V P         G + DV L RRGL  +L +GDF+EAA YPF+ER    N+  +  S +S  ++         S AYLPLP+++
Sbjct:  378 VGFAMGCFSCYGSKVGYYHALWLPIILIEMEFGSASLWGTIDECTLVLVSA----------GICAGNLAVNPRTPSDDHGQGVETDVALCRRGLRINLLYGDFIEAA-YPFMERSVVVNVAGYLASGISTELLTGNPTDVL-SMAYLPLPVSI 518          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A448YX11_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YX11_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.690e-21
Identity = 63/147 (42.86%), Postives = 85/147 (57.82%), Query Frame = 2
Query:  419 IKAVVGAGMGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 859
            ++ V  + +GCL CYGSKVGWYH +FLP+I++E+  G  S+ GA+D+ AL +V            G+C   LV  G   D  LARRG+  +L +GDFVEA  YP  E+    N   +A SALS A++         S+AYLP P AV
Sbjct:  420 LRLVFSSLLGCLFCYGSKVGWYHSIFLPLILIEMELGDPSMLGALDVLALVLVCA----------GVCLGLLVT-GNGEDKGLARRGMTTNLLYGDFVEAY-YPHAEKYPLVNAAGYAASALSSAILTTDCR----SSAYLPFPAAV 550          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A7S4IXA2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IXA2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.520e-20
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  431 VGAGMGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLV-----------RPGTK---ADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 859
            +G   GC  CYGSKVGWYH  FLP+I++E+  G+GSIWGA+D C L +V+           G+C A++V            P  +   +D  ++ RGL  +L  GDF+EAA YPF+ER    N  A+  S +S  ++          +AYLP+ L++
Sbjct:   59 LGFAFGCFFCYGSKVGWYHSFFLPIILVEMECGEGSIWGAVDECTLVLVSA----------GICTANIVYSWLFRKKSESMPPQRLHNSDHDVSLRGLKINLLCGDFIEAA-YPFMERSVIVNAFAYLASGVSTEILFRERADNVLGSAYLPVMLSL 204          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: D7FXW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW3_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 4.420e-20
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 2
Query:  443 MGCLMCYGSKVGWYHRVFLPVIVLELSGGQG-SIWGAMDLCALCMVA 580
            MGCLMCYGSK+GWYHRVFLPVIVLEL+ G+G SIWGA+DLCALCMVA
Sbjct:    1 MGCLMCYGSKIGWYHRVFLPVIVLELARGEGGSIWGAIDLCALCMVA 47          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: B7GAH2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAH2_PHATC)

HSP 1 Score: 100 bits (250), Expect = 2.100e-19
Identity = 60/174 (34.48%), Postives = 89/174 (51.15%), Query Frame = 2
Query:  419 IKAVVGAGMGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPG--------TKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAVAACPRPGWLLAAASAALVY 916
            ++   G  +GC  CYGSKVGWYH V LP+I++E+  G  S+ GA+D   L +V+           G+CAA+++           + AD+ L RRG   ++  GDFVEA  YP +E     N+  +  S LS A +         S AYLPLP+A+       W+  A +A + +
Sbjct:  374 VRIGAGCALGCFCCYGSKVGWYHSVILPLILIEMELGDASVLGAVDELTLVLVSA----------GICAANVLYSTLHSRQDHLSTADIDLCRRGFFLNIACGDFVEAC-YPLMENRLAVNVSGYLASGLSTAWLVASSSQTPKSLAYLPLPIAIGVS-ETNWVQMAVAACIAF 535          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A1E7EUU6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUU6_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.730e-19
Identity = 56/163 (34.36%), Postives = 91/163 (55.83%), Query Frame = 2
Query:  392 SHLWPQTA*-------IKAVVGAGMGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 859
            ++LW  T         I+ +  + +GCL CYGSK+GWYH +FLP+I++E+  G  S+ GA+D   L +V+           G+C   ++  G+  +  LARRG+A +L  GDF+E   YP +E+    N+  +  S++S AV+         S+AY+P P+A+
Sbjct:  365 TYLWESTGSSSVVHGYIRLLASSFLGCLFCYGSKIGWYHSIFLPIILVEMEIGDASMLGALDFLTLVLVSA----------GICLG-IILTGSTEERSLARRGIATNLLCGDFIEVC-YPHMEQHYLVNISGYVASSVSVAVLTGGCR----SSAYMPFPVAI 511          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: A0A7S1BV93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BV93_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.950e-19
Identity = 55/145 (37.93%), Postives = 84/145 (57.93%), Query Frame = 2
Query:  431 VGAGMGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLV-RPGTKA-----DVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPL 847
            +G   GC   YGSKVGWYH +FLP+I++E+  G+GS WGA+D C L +++           G+CAA+++  P  K      DV +++R L  ++  GDF+EAA YPF+ER    NL A+    ++  ++         S+AYLP+
Sbjct:  153 LGFLFGCTYIYGSKVGWYHMIFLPIILIEMEHGEGSTWGAIDECVLVLISA----------GICAANIMCHPRVKGVIKKGDVAISKRALKTNIFCGDFIEAA-YPFMERSVTINLCAYLAGGIATEIIYQSPHQVL-SSAYLPV 285          
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Match: B8LCQ5_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCQ5_THAPS)

HSP 1 Score: 97.4 bits (241), Expect = 5.390e-18
Identity = 62/164 (37.80%), Postives = 86/164 (52.44%), Query Frame = 2
Query:  404 PQTA*IKAVVGAGM--GCLMCYGSKVGWYHRVFLPVIVLELSG----GQGSIWGAMDLCALCMVAVAMVVPEKNKTGLCAAHLV------RPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVERCRCCNLGAHAGSALSGAVVAXXXXXXXPSTAYLPLPLAV 859
            P    +   +G G   GC+  YGSKVGWYH +FLP+I+LE+      G  S+ GAMD C L M+            G+CA++L       + G   +  LA + L  ++C GDF+EAA YPF+ER +  N  A+    L+  ++         STAY PLPLAV
Sbjct: 1414 PSFNALPIPIGTGFLYGCIFVYGSKVGWYHSLFLPLILLEMDSSKELGAASLLGAMDECTLVMICA----------GICASNLTFAPGKRKTGGGGERSLAWQALKTNICCGDFIEAA-YPFMERSQLVNASAYIAGGLASELLMQRRVL---STAYFPLPLAV 1563          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5L9M4_9PHAE3.610e-6367.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3PUF6_9STRA3.820e-2336.73Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1USB9_9STRA3.010e-2240.52Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A448YX11_9STRA2.690e-2142.86Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4IXA2_9STRA1.520e-2037.58Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
D7FXW3_ECTSI4.420e-2087.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B7GAH2_PHATC2.100e-1934.48Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1E7EUU6_9STRA3.730e-1934.36Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1BV93_9STRA3.950e-1937.93Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
B8LCQ5_THAPS5.390e-1837.80Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2887201..2889387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score99.8
Seed ortholog evalue1.3e-18
Seed eggNOG ortholog2850.Phatr49403
Hectar predicted targeting categorysignal peptide
EggNOG OGs2E0F2@1,2S7VP@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1224
Cds size477
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1339.1prot_C-linearis_contig11.1339.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 2887985..2889082 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927460.6404715-UTR-C-linearis_contig11:2887200..28876241622927460.6404715-UTR-C-linearis_contig11:2887200..2887624Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2887201..2887624 +
1690879713.497925-UTR-C-linearis_contig11:2887200..28876241690879713.497925-UTR-C-linearis_contig11:2887200..2887624Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2887201..2887624 +
1622927460.655456-UTR-C-linearis_contig11:2887966..28879841622927460.655456-UTR-C-linearis_contig11:2887966..2887984Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2887967..2887984 +
1690879713.5095875-UTR-C-linearis_contig11:2887966..28879841690879713.5095875-UTR-C-linearis_contig11:2887966..2887984Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2887967..2887984 +
1622927460.6986456-UTR-C-linearis_contig11:2889082..28893871622927460.6986456-UTR-C-linearis_contig11:2889082..2889387Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2889083..2889387 +
1690879713.5467181-UTR-C-linearis_contig11:2889082..28893871690879713.5467181-UTR-C-linearis_contig11:2889082..2889387Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2889083..2889387 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927460.675201-CDS-C-linearis_contig11:2887984..28881261622927460.675201-CDS-C-linearis_contig11:2887984..2888126Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2887985..2888126 +
1690879713.5205448-CDS-C-linearis_contig11:2887984..28881261690879713.5205448-CDS-C-linearis_contig11:2887984..2888126Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2887985..2888126 +
1622927460.685839-CDS-C-linearis_contig11:2888747..28890821622927460.685839-CDS-C-linearis_contig11:2888747..2889082Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2888748..2889082 +
1690879713.530625-CDS-C-linearis_contig11:2888747..28890821690879713.530625-CDS-C-linearis_contig11:2888747..2889082Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2888748..2889082 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1339.1

>prot_C-linearis_contig11.1339.1 ID=prot_C-linearis_contig11.1339.1|Name=mRNA_C-linearis_contig11.1339.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=159bp
MGCLMCYGSKVGWYHRVFLPVIVLELSGGQGSIWGAMDLCALCMVAVAMV
VPEKNKTGLCAAHLVRPGTKADVPLARRGLAFSLCFGDFVEAAAYPFVER
CRCCNLGAHAGSALSGAVVAAAAGGGPPSTAYLPLPLAVAACPRPGWLLA
AASAALVY*
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mRNA from alignment at C-linearis_contig11:2887201..2889387+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1339.1 ID=mRNA_C-linearis_contig11.1339.1|Name=mRNA_C-linearis_contig11.1339.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2187bp|location=Sequence derived from alignment at C-linearis_contig11:2887201..2889387+ (Chordaria linearis ClinC8C monoicous)
TCTTGTCACCCTTTCTTCAGTGAGTTTCGTTTTGTCCCACCCGTGCGAGC CGCTGCTGTTGTGCTTTTAGTTGGCATGAATGCGTCTCCCACAACGCAGG GAGTGATTGGATTCTTCGATCTTCGTTTCATGGGTATACCTTGGCAAGAC TAGGTGCTTTCTTCTACGCCGAAAACTACAGAGTGAGCCACACCTCTCAA TGCAGCCTAATCACAACGTGGCAAATGGACGCGTTACCTAGCGCGAAGTT GCAATAGATCCTGGTAGTAAACACCGTCGTGCATCCTTGGCATTTGCCGT GTCCCCGTCCGCCGCATCCCGCCGCCCTCGCGCCGGGCACGAATATCTTG GCAAGGGTGGTGAGTGCAATCGCTGTCTCGACGGGGGCCCTTCTCATCTG TGGCCGCAGACCGCATAGATCAAGGCGAGTTCGTTGCCACCACCCACAAC GCACGAAGCATGAATCTTGTTCCTGTGTTTACATGCCGTGCCTTGTTGTA CGAAATCTATTCACTTTGACTCTCGCGCGATTGGTTGGCGCATCGGTCTA TTTTTTGGCCGATGTTTGATCGCGTGTTTTGCTTCGTCTTCTCTCTCTCT ACGTTAACACTTCGCATGCACGAAGTGGGACGTGCGAGGCTTGGTTGTGA CCATGGTATCATCGGGCCTCCTTGGCTCGAGTTTAGCTTCAAGCGCTGTG TTGGTAAATAAGTAATTAAGCCCTTGGCTTCCGTTGTTTTCGCCTGAATG CGTTTGAAAAGTGCAGGCGGTCGTCGGAGCTGGCATGGGCTGCCTCATGT GCTACGGGTCAAAGGTCGGCTGGTACCACCGGGTATTTTTGCCGGTGATC GTGCTCGAGCTCTCTGGTGGCCAGGGCTCGATCTGGGGAGCCATGGATCT GTGCGCGCTGTGCATGGTCGCCGTGGGTGAGTCTTGGTTGATCGACAACA AACATGGTTCTCCAGCGCAAACCAGCGACCGTCATCTGGGCTTGCGTTGT ATGTTGTGCCACTTGTCGAAACACGATGATTGTAAACTGTACCTACACGT TTTTGAAAGTAGAATCAGAAAATAAAAAAGGAACCTCCCCGCAAAAGAGA CAGGACTCTTATGCGGTGATTTTTTTTATGTAGTATGGTTCTGTGGCCGA GTATTTGTCGCCATATCCAGCGTCGATTTCCCCTTAGGTCCCGGCTGTAG GACAAGATCGGTAGCACTATTTAGCGTAGATCTCAAGCTGAACTCGTAGA ATAGCAACTCGAACATGGAAACAGGTTACATTGGGCGCACTTGATTTTGT AGGTGGGGGCCAGGGAAACACTCCCGATTCTCAGGACGTGCTTTCCTCGC TAGTGCCTCTGCCCGTTCGGGTCAAATGTTGGCGGCGGCTCAGGTACGAC CACGTGCCGTAGCCTCACGTTGGTGCTGATGAAAATATCTTAACCGCGCT GCACCGAACCAGACGACATCAACGACATCAACCCGAGTCTCTTGTCTCCC CTCGCCGCCCGCCTCTCTCCTCTCTCTTGCGGCTGCACGGAAACCAGCCA TGGTGGTACCTGAAAAAAACAAGACAGGCTTGTGCGCGGCGCACCTCGTT CGGCCCGGCACCAAGGCGGACGTTCCCCTGGCCCGACGAGGCCTGGCGTT CAGCCTTTGCTTCGGCGACTTCGTGGAGGCCGCGGCGTACCCGTTCGTGG AGCGGTGCCGCTGCTGCAACCTCGGCGCCCACGCCGGCTCCGCGCTGTCC GGCGCCGTCGTCGCCGCGGCGGCGGGCGGTGGGCCCCCGTCGACCGCCTA CCTCCCGTTGCCGCTGGCGGTGGCGGCGTGCCCGAGGCCCGGGTGGCTGC TGGCGGCCGCGTCCGCGGCGTTGGTGTACTAAGGTTCAAGTAGTGCGCAC CAGTTTTGCCTTGTGACGCAAAAGGGGCCCCGTCGCTTGTGCTCGCTGCT GGGTGGGATGGCTTTGTTGTAGGAGGGCGGGGCCAGGACGTCGTTGTGCC AACGCCGGGAAGATCTGCTGTATCTTCCTGACATGAAAAGGGTTGGCTGT CCACTTTTTTTTTCTTAAATTATCGATTGCGTTATGTCGTCGTGGACTCT TTTTTACGAAATCGTATCGGCCACGGCCGGTTTTCCTTTATACCTGGCAT TTTCGGAACAACAGTATATGAAAACCTTTATCGACTC
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Coding sequence (CDS) from alignment at C-linearis_contig11:2887201..2889387+

>mRNA_C-linearis_contig11.1339.1 ID=mRNA_C-linearis_contig11.1339.1|Name=mRNA_C-linearis_contig11.1339.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at C-linearis_contig11:2887201..2889387+ (Chordaria linearis ClinC8C monoicous)
ATGGGCTGCCTCATGTGCTACGGGTCAAAGGTCGGCTGGTACCACCGGGT
ATTTTTGCCGGTGATCGTGCTCGAGCTCTCTGGTGGCCAGGGCTCGATCT
GGGGAGCCATGGATCTGTGCGCGCTGTGCATGGTCGCCGTGGATGGGCTG
CCTCATGTGCTACGGGTCAAAGGTCGGCTGGTACCACCGGGTATTTTTGC
CGGTGATCGTGCTCGAGCTCTCTGGTGGCCAGGGCTCGATCTGGGGAGCC
ATGGATCTGTGCGCGCTGTGCATGGTCGCCGTGGCCATGGTGGTACCTGA
AAAAAACAAGACAGGCTTGTGCGCGGCGCACCTCGTTCGGCCCGGCACCA
AGGCGGACGTTCCCCTGGCCCGACGAGGCCTGGCGTTCAGCCTTTGCTTC
GGCGACTTCGTGGAGGCCGCGGCGTACCCGTTCGTGGAGCGGTGCCGCTG
CTGCAACCTCGGCGCCCACGCCGGCTCCGCGCTGTCCGGCGCCGTCGTCG
CCGCGGCGGCGGGCGGTGGGCCCCCGTCGACCGCCTACCTCCCGTTGCCG
CTGGCGGTGGCGGCGTGCCCGAGGCCCGGGTGGCTGCTGGCGGCCGCGTC
CGCGGCGTTGGTGTACTAACCATGGTGGTACCTGAAAAAAACAAGACAGG
CTTGTGCGCGGCGCACCTCGTTCGGCCCGGCACCAAGGCGGACGTTCCCC
TGGCCCGACGAGGCCTGGCGTTCAGCCTTTGCTTCGGCGACTTCGTGGAG
GCCGCGGCGTACCCGTTCGTGGAGCGGTGCCGCTGCTGCAACCTCGGCGC
CCACGCCGGCTCCGCGCTGTCCGGCGCCGTCGTCGCCGCGGCGGCGGGCG
GTGGGCCCCCGTCGACCGCCTACCTCCCGTTGCCGCTGGCGGTGGCGGCG
TGCCCGAGGCCCGGGTGGCTGCTGGCGGCCGCGTCCGCGGCGTTGGTGTA
CTAA
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