prot_C-linearis_contig11.1295.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1295.1
Unique Nameprot_C-linearis_contig11.1295.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length973
Homology
BLAST of mRNA_C-linearis_contig11.1295.1 vs. uniprot
Match: D8LMZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ6_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 3.710e-205
Identity = 476/1036 (45.95%), Postives = 548/1036 (52.90%), Query Frame = 0
Query:   17 ARQDFKIYMSKLLEHSTALDAFRSEERYVDVGAAGSGGPAWGPPLKGLSEGGGSVGGTKGSPAASAALHAPSTSLSPSYFREEQ-AWPRAGAVTPPRPRPPPNFSWVAEP--PTLRGGVHGGGGGATGRSL--FLDSAPSLAPPPEGGGGP------------FDQHATARG--RLEGEDGVGDEWKAQWSRRLLRGPIHSEYQARFPWPPRSA-LKTIS--AVYATSTPAHHRGRSAASAS------NTAEIRAESSAMMTSLVPQARSVSPLRRRGRGHGRADGGSSSGARK----------EEENRGPRGTSEPPGGRRTGVDYLTEMPRNELRPSSPLNVAVQHADTEYVNGNKAAPAGVSSVGEEQRVRKDEAPRVKDALV----------ESTPPSEEMGSGTR--CSVSDGREWAGGRDQVGGYTDLALKAVAAD--GSPVAE-ASMVKQAWDAGGREAWREQAVGRGETTMTSGGKTLDYSYQSIVTEYMDEFAWPSTLPVPGRRGKRTGMGVDHVGRLLAGKRAEEPRRVL-DTGIVARLGAAADGALRAASPRHLSEMCRLKSPSPACRGLVLGLVAALGLRWRRWSDIRSRLLGNTSELVGFLKKFDKNRSGLTSATLGPFVEDPSLYPTHVRRVAKCMVWVARRWLRALHNYLAAREGNLGIGIGIDIGTASLFRTPSAAAALPDRASRPLHK--TNHGGVXXXXXXXXXXSAVEKASKRWPAAAE----IQGRPSGASEAAKEAPATQ--ADRRHTPTNDDESRDTRTKRRPSQAAATRGYGSSCPPLSTMTGGDVEGGSRMHGVC----GGKESEGEAAGVSFAGSSGGLNSESQWTAGTVTSRGDVLGAHTDDQVGMGSGAEARQDEENARTVRHRYDDSSSAGASSSV---------GVPASLRETWAARTTADKQERKGLACHFGF----APPVGERGGSRRELP-GGAQASHGCIYRHKHKARTPSRIANPKARRPTRTRTDPILANARWPPPAVVRNCDRTEQRSAFSIEHSFLAYE 972
            AR+DFKIYM KLLEHSTALD FR ++R+ D G  GSG PAWGP L G+SE GGSVG  +GSP A AA+       SPS FREE+ AWPRAGAVTPPRPRPPPNFSW+AEP  P  R                  L SA   + P    GGP             D    + G    EGE+   D WKAQWSRRL RGPIHSEYQ RFPWPPRSA L T+   A      P H RGR A++                                       G+ R DGG   G             +    G  G   P  GRR G   L   P  +L  +                                                         E T   E +G  T    SV D +EW  GR   G   D    + AAD  GS +A  A+++  A D    E WR +AVGRGE T  SGG+TLD+S QSI+TEYMDE+AWPS+LP PGRRGKR+GMGVDHVGRLLAG+RAEEP R L D  +VARLGAAAD AL A S  HLSEMCRLKSP  ACR L+LGLV ALGLRWRRWSDIR+ LLGN  EL GFLK+F+K+R+GL S  L PFVEDPSL P  VRRVA CMVWV R WL ALH+YLA +EG       +D+ T  +F+ P+ + +    A R        HG V             E    R P A E     Q R SG + AA    AT   ++++H   +      TR  RRPS+AAATRG  S+CPP ST TGGD EGGSR  G      GG+  +G    V      G L SESQWT GTVTSRGDVL   T+DQV +GS       + N R   H++     AG              GVPAS       R+T D   R G     GF    AP  G RG  RR L  G  QASH CIYRHKHK RTPSR+ANPKARRP +   DPILAN RWPPP  V   +RTEQRSA+S+EHSFLAY+
Sbjct:    3 ARKDFKIYMDKLLEHSTALDTFRPDKRHSDAGDTGSGVPAWGPSL-GMSEEGGSVGEARGSPPAGAAVDVTMPPFSPSRFREEKHAWPRAGAVTPPRPRPPPNFSWMAEPGSPASRXXXXXXXXXXXXXXARKSLSSADLASSPAPAAGGPRIKGGRLSADLGMDDGGRSWGAEEEEGEEDA-DAWKAQWSRRLSRGPIHSEYQDRFPWPPRSAFLGTVDDDAFNGAPPPPHPRGRRASARGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYPR-DGGGVGGXXXXXXXXXXXXVDTAAAGRGGEGSPSDGRRAGTGRL---PGGDLEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSEQTSGLEVIGHRTSRASSVYDEKEWEAGR---GSEADGGWPSRAADVGGSSMAGGATLIGSAGDVAAAEVWRGEAVGRGEVTTMSGGRTLDFSSQSILTEYMDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARKLPDPAVVARLGAAADRALGAGSLGHLSEMCRLKSPPLACRRLMLGLVIALGLRWRRWSDIRTHLLGNKPELQGFLKRFNKDRAGLASTALLPFVEDPSLSPAEVRRVAACMVWVPR-WLHALHDYLAVKEGK-----ELDVDTMPMFQEPATSRSRAKLARRRQSSGCRAHGTVPGTVPPDGASKGREG---RRPGAGEGGSGTQPRKSGTAAAAGATAATMGLSEQKHDQGHHHGRGGTRKTRRPSRAAATRGDDSTCPPGSTPTGGDTEGGSRGEGFRYFGEGGRGGDGGKVDVD-----GDLESESQWTVGTVTSRGDVLRTPTEDQVDIGSSVVVGGGKGNVRKAPHKH-----AGXXXXXXXXXXXXXXGVPASPPRR-RVRSTGDAARRAGTGT-LGFEETLAPKGGRRGSVRRGLSRGDTQASHACIYRHKHKGRTPSRVANPKARRPVQAAHDPILANTRWPPPVDVPAQERTEQRSAYSLEHSFLAYD 1008          
BLAST of mRNA_C-linearis_contig11.1295.1 vs. uniprot
Match: A0A6H5JPQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ9_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 2.150e-24
Identity = 56/87 (64.37%), Postives = 62/87 (71.26%), Query Frame = 0
Query:  886 PPVGERGGSRRELPGGAQASHGCIYRHKHKARTPSRIANPKARRPTRTRTDPILANARWPPPAVVRNCDRTEQRSAFSIEHSFLAYE 972
            P    RGG  R   GG Q SH CIYRHK K RTPSR+ANPKARRP +   DPILAN RWPPP  V   +RTEQRSA+S+EHS LAY+
Sbjct:    8 PRRAARGGLSR---GGTQVSHACIYRHKLKGRTPSRVANPKARRPVQAAHDPILANIRWPPPVDVPAQERTEQRSAYSLEHSSLAYD 91          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMZ6_ECTSI3.710e-20545.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPQ9_9PHAE2.150e-2464.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2343255..2350645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1295.1mRNA_C-linearis_contig11.1295.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2343224..2350894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1295.1 ID=prot_C-linearis_contig11.1295.1|Name=mRNA_C-linearis_contig11.1295.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=973bp
MLSGKSGFSQPQSIEQARQDFKIYMSKLLEHSTALDAFRSEERYVDVGAA
GSGGPAWGPPLKGLSEGGGSVGGTKGSPAASAALHAPSTSLSPSYFREEQ
AWPRAGAVTPPRPRPPPNFSWVAEPPTLRGGVHGGGGGATGRSLFLDSAP
SLAPPPEGGGGPFDQHATARGRLEGEDGVGDEWKAQWSRRLLRGPIHSEY
QARFPWPPRSALKTISAVYATSTPAHHRGRSAASASNTAEIRAESSAMMT
SLVPQARSVSPLRRRGRGHGRADGGSSSGARKEEENRGPRGTSEPPGGRR
TGVDYLTEMPRNELRPSSPLNVAVQHADTEYVNGNKAAPAGVSSVGEEQR
VRKDEAPRVKDALVESTPPSEEMGSGTRCSVSDGREWAGGRDQVGGYTDL
ALKAVAADGSPVAEASMVKQAWDAGGREAWREQAVGRGETTMTSGGKTLD
YSYQSIVTEYMDEFAWPSTLPVPGRRGKRTGMGVDHVGRLLAGKRAEEPR
RVLDTGIVARLGAAADGALRAASPRHLSEMCRLKSPSPACRGLVLGLVAA
LGLRWRRWSDIRSRLLGNTSELVGFLKKFDKNRSGLTSATLGPFVEDPSL
YPTHVRRVAKCMVWVARRWLRALHNYLAAREGNLGIGIGIDIGTASLFRT
PSAAAALPDRASRPLHKTNHGGVHGTASGLASGSAVEKASKRWPAAAEIQ
GRPSGASEAAKEAPATQADRRHTPTNDDESRDTRTKRRPSQAAATRGYGS
SCPPLSTMTGGDVEGGSRMHGVCGGKESEGEAAGVSFAGSSGGLNSESQW
TAGTVTSRGDVLGAHTDDQVGMGSGAEARQDEENARTVRHRYDDSSSAGA
SSSVGVPASLRETWAARTTADKQERKGLACHFGFAPPVGERGGSRRELPG
GAQASHGCIYRHKHKARTPSRIANPKARRPTRTRTDPILANARWPPPAVV
RNCDRTEQRSAFSIEHSFLAYE*
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