prot_C-linearis_contig11.1291.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig11.1291.1
Unique Name	prot_C-linearis_contig11.1291.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	101

Homology

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BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5JUW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW6_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 3.880e-48
Identity = 81/99 (81.82%), Postives = 87/99 (87.88%), Query Frame = 0

Query:    2 CGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI 100
            CGGG VSWFSRTQKCVT STTE AEYVAL DV KE+LFLRQ+WRF+LP+ GM  IP+FEDN+GAI LA NPISNSNSKHIDVR HFLRELVERKEI VI
Sbjct:   82 CGGGAVSWFSRTQKCVTLSTTE-AEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 179

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BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5JWJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ4_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.410e-47
Identity = 81/99 (81.82%), Postives = 87/99 (87.88%), Query Frame = 0

Query:    2 CGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI 100
            CGGG VSWFSRTQKCVT STTE AEYVAL DV KE+LFLRQ+WRF+LP+ GM  IP+FEDN+GAI LA NPISNSNSKHIDVR HFLRELVERKEI VI
Sbjct:  127 CGGGAVSWFSRTQKCVTLSTTE-AEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 224

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BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.500e-47
Identity = 80/99 (80.81%), Postives = 87/99 (87.88%), Query Frame = 0

Query:    2 CGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI 100
            CGGG VSWFSRTQKCVT STTE AEYVAL DV KE++FLRQ+WRF+LP+ GM  IP+FEDN+GAI LA NPISNSNSKHIDVR HFLRELVERKEI VI
Sbjct:   98 CGGGSVSWFSRTQKCVTLSTTE-AEYVALGDVVKEIIFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 195

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BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5JI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI51_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 2.960e-47
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 0

Query:    2 CGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI 100
            CGGG VSWFSRTQKCVT STTE AEYVAL DV KE+LFLRQ+WRF+LP+ GM  IP+FEDN+GAI +A NPISNSNSKHIDVR HFLRELVERKE  VI
Sbjct:   52 CGGGAVSWFSRTQKCVTLSTTE-AEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQVAQNPISNSNSKHIDVRHHFLRELVERKESSVI 149

[Close]

BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5KPF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF9_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 8.160e-47
Identity = 83/99 (83.84%), Postives = 87/99 (87.88%), Query Frame = 0

Query:    2 CGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI 100
            CGGGVVSWFSRTQKCVT STTE A YVAL DV KE+LFLRQVWRF+LPK GM  IP+FEDN+GAI LA NPISNSNSKHIDVR HFLRELVERKEI VI
Sbjct:  222 CGGGVVSWFSRTQKCVTLSTTE-AGYVALGDVVKEILFLRQVWRFMLPKVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 319

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BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 2.090e-46
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 0

Query:    2 CGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI 100
            CGGG VSWFSRTQKCVT STTE AEYVAL +V K +LFLRQ+WRF+LP+ GM  IP+FEDN+GAI LA NPISNSNSKHIDVR HFLRELVERKEI VI
Sbjct:   87 CGGGAVSWFSRTQKCVTLSTTE-AEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 184

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BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 6.720e-46
Identity = 80/99 (80.81%), Postives = 86/99 (86.87%), Query Frame = 0

Query:    2 CGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI 100
            CGGG VSWFSRTQKCVT STTE AEYVAL DV KE+LFLRQ+WRF+LP+ GM   P+FEDN+GAI LA NPISNSNSKHIDVR HFLRELVERKEI VI
Sbjct:  197 CGGGAVSWFSRTQKCVTLSTTE-AEYVALGDVVKEILFLRQIWRFMLPQVGMPCNPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI 294

[Close]

BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 8.830e-46
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0

Query:    1 MCGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKV 99
            MCGGG V+WFSRTQKCVT STTE AEYVA+ADV KE+LFLRQVWRF+LP AGM  IP+FEDN+GAI +A+NPI+NSNSKHIDVR HF+RELVERKEI +
Sbjct:  191 MCGGGCVTWFSRTQKCVTLSTTE-AEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISI 288

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BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5K684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K684_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 9.050e-46
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0

Query:    1 MCGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKV 99
            MCGGG V+WFSRTQKCVT STTE AEYVA+ADV KE+LFLRQVWRF+LP AGM  IP+FEDN+GAI +A+NPI+NSNSKHIDVR HF+RELVERKEI +
Sbjct:  181 MCGGGCVTWFSRTQKCVTLSTTE-AEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISI 278

[Close]

BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Match: A0A6H5K7L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7L4_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.190e-45
Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 0

Query:    2 CGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPKAGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI 100
            CGGG VSWFSRTQKCVT STTE AEYV+L D  KE+LFLRQ+WRF+LP+ GM  IP+FEDN+GAI LA NPISNSNSKHIDVR HFLRELVERK I  I
Sbjct:   75 CGGGAVSWFSRTQKCVTLSTTE-AEYVSLGDAVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKAISAI 172

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot

BLAST of mRNA_C-linearis_contig11.1291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUW6_9PHAE	3.880e-48	81.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JWJ4_9PHAE	1.410e-47	81.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KIJ7_9PHAE	2.500e-47	80.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JI51_9PHAE	2.960e-47	79.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KPF9_9PHAE	8.160e-47	83.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KEZ8_9PHAE	2.090e-46	79.80	Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KLT9_9PHAE	6.720e-46	80.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KP70_9PHAE	8.830e-46	78.79	Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K684_9PHAE	9.050e-46	78.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K7L4_9PHAE	1.190e-45	77.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 3..97
None	No IPR available	PANTHER	PTHR11439:SF275		coord: 3..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig11	contig	C-linearis_contig11:2312576..2312878 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig11.1291.1	mRNA_C-linearis_contig11.1291.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig11 2312576..2313044 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig11.1291.1 ID=prot_C-linearis_contig11.1291.1|Name=mRNA_C-linearis_contig11.1291.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=101bp
MCGGGVVSWFSRTQKCVTTSTTEEAEYVALADVTKELLFLRQVWRFLLPK
AGMLLIPMFEDNEGAISLANNPISNSNSKHIDVRRHFLRELVERKEIKVI
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039537	Retrotran_Ty1/copia-like