prot_C-linearis_contig11.1286.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1286.1
Unique Nameprot_C-linearis_contig11.1286.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length175
Homology
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: D7FS33_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS33_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 5.090e-53
Identity = 82/109 (75.23%), Postives = 92/109 (84.40%), Query Frame = 0
Query:    1 MAMTTDEMVFIFCSNGVLIPWLALMFAPKWKWTSPITMVAVLISCVVYTYYFGAHLLNSKD-VLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYLVQKNI 108
            M MTTD+MVFIFCSN V IPWLALM APKWKWTSPIT   VL+SCVVYT YF + + NSK+ VL MY +MGTLDG+AKLF   G+LLPAWVHYLAFDL+AGHYLVQKN+
Sbjct:    1 MTMTTDDMVFIFCSNVVFIPWLALMIAPKWKWTSPITKAVVLMSCVVYTIYFASQMRNSKEGVLAMYMDMGTLDGIAKLFRGDGILLPAWVHYLAFDLVAGHYLVQKNM 109          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: A0A7R9V7A6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V7A6_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 1.270e-15
Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    5 TDEMVFIFCSNGVLIPWLALMFAPKWKWTSPITMVAVLISCVVYTYYFGAHLLNSKDVLGM--YAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYL 103
            TD+ +F  C NGVL+ W  L+ APKW+ T  I    VL+S + Y+  + A + N     G   +A M TL GVAKLF+    +LPAWVHY+AFDL  G ++
Sbjct:    9 TDDDIFQ-CLNGVLLAWALLIVAPKWRPTQAI----VLLSAMFYSALYAALIFNMIYQGGALDFAAMSTLPGVAKLFATPEAVLPAWVHYIAFDLWTGRWI 104          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: A0A2D0N432_9BACT (Uncharacterized protein n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0N432_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 1.260e-14
Identity = 36/91 (39.56%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   14 SNGVLIP-WLALMFAPKWKWTSPITMVAVLISCVVYTYYFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYL 103
            +N +++P WL L+ APKW+WTS I +++++I+ +   Y +   L+      G +   G+L+G+ +LF D G +L  WVHYLAFDL+AG ++
Sbjct:   10 ANAMVLPGWLLLIIAPKWQWTSRI-VISIIITLLAALYVY---LVFGSISFGDFESFGSLEGIIQLFGDRGAVLTGWVHYLAFDLLAGWFI 96          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: UPI001939AC88 (ABA4-like family protein n=1 Tax=Aurantibacter crassamenti TaxID=1837375 RepID=UPI001939AC88)

HSP 1 Score: 74.7 bits (182), Expect = 5.320e-14
Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 0
Query:    7 EMVFIFCSNGVLIPWLALMFAPKWKWTSPITMVAVL-ISCVVYTYYFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYLVQKNIA 109
             ++F  C++ VLI W+ L+FAPKWK T  I +  V+ +  +VY       +LN            TL  V  LF D   L   WVHYLAFDL  G Y+V++ IA
Sbjct:    4 SLIFKICNSFVLIGWILLLFAPKWKLTQNIVVYGVITLLSLVYLALIAPTILNFNP-----DAFSTLANVKALFQDDAALTAGWVHYLAFDLFVGAYIVRQGIA 102          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: A0A848VJX8_9BACT (DUF4281 domain-containing protein n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A848VJX8_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 5.540e-13
Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 0
Query:    9 VFIFCSNGVLIPWLALMFAPKWKWTSP-ITMVAVLISC-VVYTYYFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYLVQKNIAWVFSGETQTASPSL 123
            +F F S  VL  WL L+FAP+WKWT+  +T V + ++  +VY Y    +  NS+         G+L+ V KLFS+  ++   W+HYLAFD++ G        +W+    TQ   P L
Sbjct:    6 LFSFGSTLVLPGWLLLVFAPRWKWTTGLVTTVLIPVALGIVYIYLMATNFGNSE------GGFGSLEEVTKLFSNPALVTAGWLHYLAFDMLVG--------SWIVRNATQNGVPHL 108          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: UPI0019C109C5 (DUF4281 domain-containing protein n=1 Tax=Ferruginibacter sp. TaxID=1940288 RepID=UPI0019C109C5)

HSP 1 Score: 71.6 bits (174), Expect = 1.070e-12
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 0
Query:    7 EMVFIFCSNGVLIPWLALMFAPKWKWTSPITMVAVLISCVVYTYYFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYL 103
            +++F  C+N  L+ WL L+FAP+WK+T P     +++        F A         G     G+L+ VA+LFS+   LL  WVHYLAFDL+ G ++
Sbjct:    4 DLLFTVCNNAALVGWLLLVFAPRWKYTRPAIFSGLILGFAALYILFIASSFGKTPGGGF----GSLEQVARLFSNPVALLAGWVHYLAFDLLVGCWI 96          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: D2QUD2_SPILD (Uncharacterized protein n=2 Tax=Spirosoma TaxID=107 RepID=D2QUD2_SPILD)

HSP 1 Score: 71.2 bits (173), Expect = 1.340e-12
Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    5 TDEMVFIFCSNGVLIPWLALMFAPKW---KWTSPITMVAVLISCVVYTYYFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSG--VLLPAWVHYLAFDLMAGHYLVQKN 107
            T E VF   S  VL  WL ++FAP+W   KW     ++ V+++ +   Y FG   ++       ++  GTL GV  LFS  G  V+L  WVHYLAFDL+AG  +V+ +
Sbjct:    2 TPEAVFSLASTLVLPQWLLMIFAPRWVVTKWLMNSYLIPVVLAVIYSIYLFGGGPVD-------FSAFGTLAGVKGLFSGGGDGVMLAGWVHYLAFDLVAGTVVVRDS 102          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: A0A250XKW1_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XKW1_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 1.640e-12
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 0
Query:    5 TDEMVFIFCSNGVLIPWLALMFAPKWKWTSPITMVAVLISCVVYTYYFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYLVQKNIA 109
            +DE +F    N VL  W+ L+ +PKWK T  +  +A  + C++Y       LL+    + +  +M + DGVA+L S    +LPAWVH+ AFDL  G ++ Q  ++
Sbjct:   10 SDEQLFQLV-NVVLPAWVLLIISPKWKTTQAVVTLAASLMCLLYALLLANTLLSPTSDIQIQ-DMFSYDGVARLLSAKSTVLPAWVHFAAFDLWTGRWIAQDAMS 112          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: A0A846FNE5_9CYAN (DUF4281 domain-containing protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FNE5_9CYAN)

HSP 1 Score: 69.7 bits (169), Expect = 5.670e-12
Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = 0
Query:    5 TDEMVFIFCSNGVLIPWLALMFAPKWKWTSPITM-VAVLISCVVYTYYFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYLV 104
            T + +F   +  VL  WL L+ AP WKWT  I + + V I  V+Y     A  + S D    ++  G+L+GV +LF++   +   W+HYLAFDLM G ++V
Sbjct:    2 TPDQLFQIANTMVLPAWLLLIIAPTWKWTGRIVVGIIVTILSVLYVILL-AEGIGSLD----FSSFGSLEGVMQLFTEPSAVAMGWIHYLAFDLMVGWFIV 97          
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Match: A0A2S7T868_9FLAO (Uncharacterized protein n=1 Tax=Aureicoccus marinus TaxID=754435 RepID=A0A2S7T868_9FLAO)

HSP 1 Score: 69.3 bits (168), Expect = 6.650e-12
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 0
Query:    5 TDEMVFIFCSNGVLIPWLALMFAPKWKWTSPIT--MVAVLISCVVYTYYFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAGHYLVQKN 107
            T + VF      VL  WL ++  PKWK T  +    V  L+  +VY  Y G  L       G   +  TLD V  LF++   +L  W+HYLAFDL+ G ++VQ+N
Sbjct:    2 TADTVFSIAGTSVLPMWLLMIVLPKWKVTRFLVDYRVLPLLLSLVYATYIGISLQG-----GANFDFRTLDSVMNLFTEKDAVLAGWIHYLAFDLLVGMWMVQRN 101          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS33_ECTSI5.090e-5375.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9V7A6_9CHLO1.270e-1544.55Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A2D0N432_9BACT1.260e-1439.56Uncharacterized protein n=1 Tax=Flavilitoribacter ... [more]
UPI001939AC885.320e-1439.42ABA4-like family protein n=1 Tax=Aurantibacter cra... [more]
A0A848VJX8_9BACT5.540e-1335.90DUF4281 domain-containing protein n=1 Tax=Rhodothe... [more]
UPI0019C109C51.070e-1237.11DUF4281 domain-containing protein n=1 Tax=Ferrugin... [more]
D2QUD2_SPILD1.340e-1238.89Uncharacterized protein n=2 Tax=Spirosoma TaxID=10... [more]
A0A250XKW1_9CHLO1.640e-1235.24Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A846FNE5_9CYAN5.670e-1237.62DUF4281 domain-containing protein n=1 Tax=Cyanothe... [more]
A0A2S7T868_9FLAO6.650e-1237.14Uncharacterized protein n=1 Tax=Aureicoccus marinu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025461ABA DEFICIENT 4-likePFAMPF14108DUF4281coord: 9..107
e-value: 3.8E-20
score: 72.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 36..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2285965..2290732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1286.1mRNA_C-linearis_contig11.1286.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2284576..2290804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1286.1 ID=prot_C-linearis_contig11.1286.1|Name=mRNA_C-linearis_contig11.1286.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=175bp
MAMTTDEMVFIFCSNGVLIPWLALMFAPKWKWTSPITMVAVLISCVVYTY
YFGAHLLNSKDVLGMYAEMGTLDGVAKLFSDSGVLLPAWVHYLAFDLMAG
HYLVQKNIAWVFSGETQTASPSLPWPPACSSTAWPGPSECCCTSSCELRQ
TSSAGSPWDDKFSCIFEFGASCKC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025461ABA4-like