prot_C-linearis_contig11.1279.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1279.1
Unique Nameprot_C-linearis_contig11.1279.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length365
Homology
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BLAST of mRNA_C-linearis_contig11.1279.1 vs. uniprot
Match: D7FPP2_ECTSI (Ankyrin repeat domain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP2_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 3.470e-128
Identity = 218/367 (59.40%), Postives = 257/367 (70.03%), Query Frame = 0 
Query:    7 SDEDDAKQVAFLRARIVEATREGDTPEIRYLVGISAAKRLLTACDESSGWSLLHFSCSRGFLDITTTLVKAGADPLKALDKHGKTCLHIAIEHDRRDVVKMLLERHPVKKWPRQSKFTLGQTAARRGRRAIMKLLLDNGLDPNERGIRRETPLHQXXXXXXXXXXXXXXXXXXXVSAREAWAGRTPLHCACQSGSLEAATALILKGGADAHIPDLSAARHTPLEAAVVSGYRALSHRVVIMVDNRQKAEQKRYALLESFAVASREAAWRETKLAKNRVSSLRGRVVAKRLFVRLEKQQLAETVRGQLARANARLRNLQTQHERLQHRGNERRAQAMAA--------ARPSTCPTLPSAGGAPGGGHV 365
            SD++DAK VAFLRAR+VEA REGDTPE++YL+GI+AAKRLL A DESS W LLHFSCSRGFLDITT L++AG   LKA+DKHGKTCLH+AIEHD RDV+++LL+ H                    G   +++LLL +G D                                 V+AREAWAGRTPLH ACQ+GSL+AATALI+KGGAD H+PDLSAARHTPLEAAVVSGYRALSHR+VI+VD+RQ+A++KR A+LE F +ASREA  RETKL KN VSSLRGRVV KR  VRLEKQQL ET+RG L+RA  RLRNLQ+QHERL H   E+ +   A          RPSTCPTL + GG  GG  +
Sbjct:   15 SDDEDAKHVAFLRARVVEAAREGDTPEMKYLMGITAAKRLLAATDESSRWGLLHFSCSRGFLDITTMLLEAGTKALKAVDKHGKTCLHVAIEHDCRDVIELLLDWH--------------------GHAEVIELLLRHGAD---------------------------------VTAREAWAGRTPLHYACQAGSLKAATALIIKGGADPHVPDLSAARHTPLEAAVVSGYRALSHRLVILVDSRQRADEKRQAILEGFDMASREAVRRETKLVKNAVSSLRGRVVGKRSLVRLEKQQLTETLRGHLSRAKTRLRNLQSQHERL-HAREEKCSPVTAVIPAASVPDCRPSTCPTLSATGGLRGGSRM 327
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPP2_ECTSI3.470e-12859.40Ankyrin repeat domain 3 n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..333
NoneNo IPR availablePFAMPF13637Ank_4coord: 157..209
e-value: 1.4E-10
score: 41.5
NoneNo IPR availablePANTHERPTHR24203:SF32coord: 124..209
NoneNo IPR availablePANTHERPTHR24203:SF32coord: 53..212
coord: 157..236
NoneNo IPR availablePANTHERPTHR24203FAMILY NOT NAMEDcoord: 124..209
NoneNo IPR availablePANTHERPTHR24203FAMILY NOT NAMEDcoord: 53..212
coord: 157..236
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 170..184
score: 41.89
coord: 89..104
score: 33.74
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 88..117
e-value: 0.0013
score: 28.1
coord: 188..218
e-value: 0.014
score: 24.6
coord: 154..183
e-value: 2.8E-5
score: 33.5
coord: 54..83
e-value: 0.78
score: 18.8
coord: 121..150
e-value: 6.3
score: 15.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 88..111
score: 9.19
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 154..186
score: 14.292
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 188..221
score: 11.701
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..115
e-value: 2.5E-16
score: 61.7
coord: 116..291
e-value: 2.1E-30
score: 108.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 23..238
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 42..111
e-value: 1.9E-10
score: 41.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 54..236
score: 42.388

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2178623..2181701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1279.1mRNA_C-linearis_contig11.1279.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2178623..2181701 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1279.1 ID=prot_C-linearis_contig11.1279.1|Name=mRNA_C-linearis_contig11.1279.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=365bp
MGPATRSDEDDAKQVAFLRARIVEATREGDTPEIRYLVGISAAKRLLTAC
DESSGWSLLHFSCSRGFLDITTTLVKAGADPLKALDKHGKTCLHIAIEHD
RRDVVKMLLERHPVKKWPRQSKFTLGQTAARRGRRAIMKLLLDNGLDPNE
RGIRRETPLHQASRHGHARVIELLLKHGADVSAREAWAGRTPLHCACQSG
SLEAATALILKGGADAHIPDLSAARHTPLEAAVVSGYRALSHRVVIMVDN
RQKAEQKRYALLESFAVASREAAWRETKLAKNRVSSLRGRVVAKRLFVRL
EKQQLAETVRGQLARANARLRNLQTQHERLQHRGNERRAQAMAAARPSTC
PTLPSAGGAPGGGHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom