prot_C-linearis_contig11.1273.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1273.1
Unique Nameprot_C-linearis_contig11.1273.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1561
Homology
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE)

HSP 1 Score: 1494 bits (3868), Expect = 0.000e+0
Identity = 895/1502 (59.59%), Postives = 1036/1502 (68.97%), Query Frame = 0
Query:   87 MLTAHVWRTATSRRVLARPVAGLTRLQAVGSSGGGSGTKPSSTSSAVDAKQAQKVGAXXXXXXXXXXXXXXXXXXXGPGTVPDGVKKASPRQAKRATAERKKGATLAGGGDGS---EQYVYTESLAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVP-FPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGE------RGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDK----VFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATP-------SPEEMP-QEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLVESWVVRG-----DGDETPAEGRRGEEGEDTAVAASGIGSGRD-DEERGHPQSLGLLLALCGLEADAKALLGGFKAPASWPLLSAALPSGAANDVVATAVASVEGRREEDIWAEPGEKQAREGGDAASKGSELPSSVPLGAVAEVAAGNATAFTATAAAAGTPPVAYSLLEYEEAAKGEAAAVGVEAGNLSEAAERQEQGRREQPP---AMPATAYFDDEADFLEKSASEYAKLMVDQGEDEEYLSAFSFAPPPGFAAEAPPSRATGRVDGMSEADRFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQRSGVVPSEGTAAGGGRSTSDTSPPCGGEGTEPGIIRRANLLEGGQTIVLIDLETTGFGPKNDRVIQLASKVLGSPDPSHLYSAYVDPEGAYLSPHIQEMTGITPAILTANNARAFREVWQDFASWLSGISGEEEAEGRSNGGVVLVAHNANFDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLARPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRAVASDHPTCQIPVPRSLADLHAATQAASAPRPKSKAPTLGGGVGSRRSYYTRRRGTGR 1557
            ML  H WRT  +RRVL RP  GL RLQ VGS       K  S++S V A++ ++                      G     DG K + PRQA++AT      A    GG G+   E Y Y E+L++LSSPPE ALKGVGP++AEQLAKLG+ +VA+LLWHLPTGMVDRR  S VADLVEGE+AT+LLKV  V ++      P  R  ++ RV CVD+  DK+D+V+FGG W  +   +E GETKVVSG+VT DK+S +LVM+ P+VVAP ADL+KV+ +QPTYPLTAGL+  SLRS IALALD+LE V  FPPEWI+ E MRE+GWPSLREAL AAH PQ+++DL  SG TRSRLAYDELLASQ+ LALRRR  RG    +    G+ G+       GEM+ +GGAALV+EGR RLPF+LTSSQNK LDEIL DM G GSC SLRMFRLLQGDVGSGKTAVAFLAML+AAGQG+QSCMLAPTEVLT QHLQTLRSMA GIERPDG+GNLRVELLTG+VKGK+RQ LL+DVKAG+VDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRD+LTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMP+GAA IETTL+PV KAK+++ RLK R  TDDK    VFWVLPQINKSESS+RQHLASATERY+ALV+ELG DRV+LLHGKMTSAEKN+RLSEFS  EKG+GLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGK  ++ TA         +PEE P Q+KRQ+SHCILLYGPD+  DATERLKA+R TRDGFLLAERDLALRGPGEVLG+RQKGYIEGKFKVADLARQGSLA+ A+KRAR LVESW  RG     D ++  A G   + G    VA    G G D DEE G P+SLGLLL LCGL ADA+ALL GF +    P        GAA+   A  VA  E  R     AE  E++A+E   A  + +E P S+P+ A      G  +  T+T AA   PP+A S    +   + EA A GV  G L          R ++P    A+PA  YFDDEADFLEKSASEYA++M DQ E++EYLS FSFAPP                        F                                                SG V   GT  GG            GEG    IIRRA+L EG  T+V++D+ETTG   K DRVIQLA+KVLGS +P H ++ Y+DP    + P ++E+TGITP IL AN AR F +VW +FA+WLSG+  EE+AEGR  GGVV VAHNA FDHKFL  E  R GF +FMMGQDMGVV +VD+L  L+E S+WRQ  +D   P+RP+ FKL  +FEHLYGY MP AHNAMGDV GLE +LSAPGI+E WR VAS HP CQIPVPRSLA+L AAT  A+  R      T   G      YY  RR TGR
Sbjct:    1 MLGRHAWRTTAARRVLTRPNFGLYRLQTVGSGA----PKRGSSTSTVAARELRR--ETSSSGNNASDEFAATGTGYGTAATRDGKKGSGPRQARKATTGV---AAARRGGKGAVVDESYAYAETLSYLSSPPEDALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSD------PRWRSPRITRVHCVDVAEDKIDIVMFGGSW--LCKNYEPGETKVVSGKVTMDKYSESLVMTMPEVVAPAADLEKVLVIQPTYPLTAGLSGSSLRSVIALALDQLEGVTHFPPEWIDQETMREHGWPSLREALSAAHSPQQEEDLRPSGATRSRLAYDELLASQIVLALRRRHTRGIGGGVSGGRGDQGDGSAAAATGEMARAGGAALVEEGRRRLPFDLTSSQNKALDEILKDMDGSGSCRSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTGQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKSRQQLLNDVKAGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPRGAANIETTLVPVAKAKEVMDRLKGREDTDDKARCGVFWVLPQINKSESSARQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNRRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPATPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAADTEDAAASGAPRKGG---TVALKEGGPGADCDEEGGRPESLGLLLVLCGLGADAEALLSGFASRTPLP--------GAADGDAAGVVAGGEADR----GAEAIEREAKE--HAPERATEFPQSLPVAAATPD--GVESLITSTPAA--DPPLAASSSTPDFVVRAEATA-GV-GGVLDSRTTTGPDSRSKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEDQDEEDEYLSGFSFAPPLQPXXXXXXXXXXXXXXXXXXXXXF------------------------------------------------SGGVAPTGTPVGGXXGAPS------GEGVA--IIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYIDPGVVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEELSRCGFSRFMMGQDMGVVCIVDSLRCLKENSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPNAHNAMGDVVGLERILSAPGINEGWRGVASSHPACQIPVPRSLAELQAATNIAARSRKPPARRTKADGW----RYYNNRR-TGR 1401          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: D7FPN7_ECTSI (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN7_ECTSI)

HSP 1 Score: 1077 bits (2786), Expect = 0.000e+0
Identity = 652/1083 (60.20%), Postives = 744/1083 (68.70%), Query Frame = 0
Query:  495 FNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATP-------SPEEMP-QEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLVESWVVRG-------DGDETPAEGRRGEEGEDTAVAASGIGSGRD-DEERGHPQSLGLLLALCGLEADAKALLGGFKAPASWPLLSAALPSGAANDVVATAVASVEGRREEDIWAEPGEKQAREGGDAASKGSELPSSVPLGAVA--EVAAGNATAFTATAAAAGTPPVAYSLLEYEEAAKGEA-AAVGVEAGNLSEAAERQEQGRREQPP-AMPATAYFDDEADFLEKSASEYAKLMVDQGEDEEYLSAFSFAPPPGFAAEAPPSRATGRVDGMSEADRFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQRSGVVPSEGTAAGGGRSTSDTSPPCGGEGTEPGIIRRANLLEGGQTIVLIDLETTGFGPKNDRVIQLASKVLGSPDPSHLYSAYVDPEGAYLSPHIQEMTGITPAILTANNARAFREVWQDFASWLSGISGEEEAEGRSNGGVVLVAHNANFDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLARPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRAVASDHPTCQIPVPRSLADLHAATQAASAPRPKSKAPTLGGGVGSRRSYYTRRRGTGR 1557
            + LTS + KT  ++L DM G GSCSSLRMFRLLQGDVGSGKTAVAFLAML+AAGQG+QSCMLAPTEVLTVQHLQTLRSMA GIERPDG+GNLRVELLTG++KGKARQ LL+DVK+G+VDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRD+LTGFAQHVLYLSATPIPRSLTLAL+GDMEISQIREMP+G A IETTLIPV KAK+++ RLK R  TDD          KSESS+RQHLASATERY+ALV+ELG DRV+LLHGKMTSAEKNKRLSEFS  EKG+GLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGK  ++ TA         SPEE P Q+KRQ+SHCILLYGPD+  DATERLKA+R TRDGFLLAERDLALRGPGEVLG+RQKGYIEGKFKVADLARQGSLA+ A+KRAR LVESW  RG       D +E  A G     G    VA    G+G D DEERG P+SLGLLL LCGL ADAKALL GF A  + P      P GA  D    A     G           E++A+E   A  + +ELP S P+ A    +V + N    T+T AA   P  + S  ++   A+ EA AAVGV    ++  A     G+   P  A+PA  YFDDEADFLEKSASEYA++M  Q E++EYLS FSFAP                      +                                    +  P   PVG               A GG S         GEG    IIRRA+L EG  T+V++D+ETTG   K DRVIQLA+KVLGS +P H ++ +VDP    + P ++E+TGITP IL AN AR F +VW +FA+WLSG+  EE+AEGR  GGVV VAHNA FDHKFL  E  R GF +FMMGQDMGVV +VD+L  L+E S+WRQ  +D   P+RP+ FKL  +FEHLYGY MP AHNAMGDV GLE +LSAPGI+E WR VAS HP+CQIPVPRSLA+L AAT  A+  R      T   G      YY  RR TGR
Sbjct:   18 YRLTSLRVKT--KVLKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSIKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDTDD----------KSESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPASPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAAAADAEEAAASGAPRVGG---TVALKEGGAGADYDEERGRPESLGLLLVLCGLGADAKALLSGF-ASRTPP------PGGADGDAAGVAA----GXXXXXXXXXXREREAKE--HAPQRATELPQSFPVAAATPDDVESLN----TSTPAADAPPASSSSAPDFAARAEAEATAAVGVSGSRMT--AGPGSSGKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXSS----------------------------------GEVAPTGPPVG---------------ADGGASR--------GEGVA--IIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEFVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSHPSCQIPVPRSLAELQAATNIAARTRKPPARRTKADGW----RYYNNRR-TGR 1002          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A4D9CQG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQG2_9STRA)

HSP 1 Score: 509 bits (1311), Expect = 1.650e-152
Identity = 439/1405 (31.25%), Postives = 641/1405 (45.62%), Query Frame = 0
Query:  219 LKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWK------VKGEFEVGETKVVSGRVTADKFSG-NLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPP----------------EWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNR-----GAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIE---------------------------RP-----------DGQGN---LRVELLTGNVK-GKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRV--GTDDKVFWVLPQINKSESSSRQH-----------------LASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGD---ATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLVESWVVRGDGDETPAEGRRGEEGEDTAVAASGIGSGRDDEERGHPQSLGLLLALCGLEADAKALLGGFKAPASWPLLSAALPSGAANDVVATAVASVEGRREEDIWAEPGEKQAREGGDAASKGSELPSSVPLGAVAEVAAGNATAFTATAAAAGTPPVAYSLLEYEEAAKGEAAAVGVEAGNLSEAAERQEQGRREQPPAMPATAYFDDEADFLEKSASEYAKLMVDQGEDEEYLSAFSFAPPPGFAAEAPPSRATGRVDGMSEADRFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQRSGVVPSEGTAAGGGRSTSDTSPPCGGEGTEPGIIRRANLLEGGQ-TIVLIDLETTGFGPKNDRVIQLASKVL-------------------------GSPDPSHLYSAYVDPEGAYLSPHIQEMTGITPAILTANNARAFREVWQDFASWLSGISGEEEAEGRSNGGVVLVAHNANFDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLARPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRAVASDH 1505
            +KGVGP  AE L ++GIH+V +LL+HLP G++D   V  V DL EG+ A+V ++V   +    ++P           + C+D +G  +D++ F    +K          F+ G    + G+V   K+   +L MS P+ V         + V+P Y LT GL    LR  +  AL  L+  P P                 +W+      +  WP+  EAL+  H P   +D+  S   R RLA+DELLA+QL  ALRR   R      A   +  S          +  G   L      +LPF +T+ Q +T++EI  DM         RM RLLQGDVG+GKT  A L ML+A   G Q+ MLAPTE+L  QH  TL+ ++ G++                           RP           +G+G    LR+E+LT N K GKAR+ LL++++ G++DIL+ TH++L S    FRDLGL V+DEE RFGV QR++L+    +VLY+SATPIPR+L L  YGDME+S++ E P    ++ T++ P+     I +RL+ ++   + +KVFWVLP I +  SS +                   + S T+R++A+VE LG + V ++HG+M S  K + L +FS        RVLVSTS++EVGVDVP A VC+VE+AE FGLSQLHQLRGR+GR      G   +A    + M Q      HC+L Y  D S +   A +RL  ++ T DGF +AE+DL LRGPGEVLG RQ G+    F++ DLA+   L D+AN+ AR   +S V R +G                                            C +EA A   +  ++   +   +  A PS +  ++                     +K++R            PSS       +V+               T     SLLE   +         +  G +S          +++PP              L+KS S               ++    AP P   ++ PP   T     ++  DRF                          + P P S  + +    G+     G  P   T     R + D  P          I R +  LE    T ++ D ETTG   +++R+IQLA+KVL                         G P+   L++ YVDP G ++   I E+TGI+   L    AR F EVW DF  W++ + G +         VVLVAHNA FDHK L+ +  R   D+ +  ++  +V ++DTLAV R   IW +   D   P +P  F+   L+ +L    +  AH+A GDV GLE++L  P ++++WR+  S H
Sbjct:   80 IKGVGPAAAESLGRMGIHTVLDLLFHLPVGVLDWGQVKLVRDLQEGDTASVAVRVVGHTEAEGRRP---------LTIHCLDSEGSPLDLLFF---LYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTLQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHASSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALASSFSSTSSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMAS----KHGRMVRLLQGDVGTGKTLCALLGMLRAIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQVREMEAVEETRGISAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKALLEELRRGEIDILIGTHSLL-SDEVVFRDLGLTVIDEEHRFGVRQREKLSNDT-NVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVT----RVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGR------GYAVSAKADRKAMDQ--LTECHCVLAYD-DTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKG--FRLVDLAKHEGLLDEANQVARAHADSVVRREEG--------------------------------------------CTVEAVAHGNILEYEGVETLLRIFEAKPSSSGENI---------------------QKESR------------PSSXXXXXXXKVS---------------TQSKNNSLLESTASXXXX---XKLSMGGVS----------KKKPPTS------------LQKSKSAP-------------IANACTAPAPSSISDLPPGWTT-----VTYGDRFE------------------------ISTPPPSSGDEEIEG--GELTLMPGTEPVLST-----RFSIDDLP----------IPRVSIDLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSPSDWGGGEDDEQANQLAAAGLASGGEPEDGLLFNGYVDP-GFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAVRGGKP--------VVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGD-GLPIKPNTFRQGALYRYLLRDDLQNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAH 1265          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A836CEI0_9STRA (ATP-dependent DNA helicase RecG n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI0_9STRA)

HSP 1 Score: 511 bits (1315), Expect = 7.190e-152
Identity = 481/1491 (32.26%), Postives = 662/1491 (44.40%), Query Frame = 0
Query:  206 ESLAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGP----WWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVP--FPPEW----------------------INPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRR----QNRGA--------ERTMHESDGEAGERGEMSASGGAALVDEGRGR-------------------------LPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSA---------------------------STAFRDLGLAVVDEEQRFGVEQRDRLTGFAQH----------------------------VLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSS---RQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKT------ATATPSPEEMPQEKRQSS-HCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYI---EGKFKVADLARQGSLADDANKRARHLVESWVVRGDGDETPAEGRRGEEGEDTAVAASGIGSGRDDEERGHPQSLGLLLAL----CGLEADAKAL--LGGFKAPASWPLLSAALPSGAANDVVA--TAVASVEGRREEDIWAEPGEKQAREGG-DAASKGSELPSSVPLGAVAEVAA--GNATAFTATAAAAGTPPVAYSLLEYEEAAKGEAAAVGVEAGNLSEAAERQEQGRREQPPAMPATAYFDDEADFLEKSASEYAKLMVDQGED-------------------------------------EEYLSAFSFAPPPGFAAEAPPSRATGRV---DGMSEADRFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQRSGVVPSEGTAAGGGRSTSDTSPPC-GGEGTEPGIIRRANLLEGGQTIVLIDLETTGFGPKNDRVIQLASKVL-----GSPDPSHLYSAYVDPEGAYLSPHIQEMTGITPAILTANNARAFREVWQDFASWLSGISGEEEA-EGRSNGG--VVLVAHNANFDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLARPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRAVAS 1503
            E +  L + P+ ALKG+GPK    L KL I ++A+LL HLPTG +DRR    +AD   G++ T+++KV  +S  +           +   + C D  G  +D+V +  P    W   K    +G  +V+SG+V  +  SG + M  PD+V P  DL +V+ V+  Y LT GL    +R  +A ALD +EE       +W                       + +    NG   +  AL   H PQ   DL  S P R+RLAYDELLA Q+ LA RRR    + RGA        ER +H   GE  +   +SA+  +AL D+ RG                          LPF LT  Q   L+EI  DM GG      RM RLLQGDVGSGKT VA +A+L+    G Q C+LAPTEVL  QH  T+  +    +R  G+G +RV LLTG V+G+ R  +L +++ G +D+LV THAV   A                                 LGLAVVDEEQRFGV QR+ L     H                            VLY+SATP PR+L+L  +GD++++ +RE P+GA++   T + V + + I+          DKVFWVLP + ++ S     R HLASA  R+ +L E LG +RV LLHG+MT+AEKN+ L+ F  AE G  +RVLV+T+IIEVGVD+P A VCV+ENAE FGLSQLHQ+RGR+GR+              ATA         E   ++ HC+LLY       A  RLK +  T DGF +AE DL LRGPGE+LGVRQKG++    G F+V DL +  +L   A+  AR LVE+                       A A S         +     +L LL AL     G EA   +    GG K PA       ALP   A    +           +E+D+    G + A   G DAA     L SS P   V + A+  G+AT      AAA +                                                                                                                  E L    F P     + A P+ AT R         A  F  L     A   E       +   ++ +  PP                   +P +   AGG R  +  S    G +  +   +   +L       V++D+ETTGF    DRV+Q+A+ VL     G+    H ++ Y DP   Y+S  IQ +TGITP +L +  A  F + WQ F +WL+  + + +A  G +  G  +VL+AHNANFDH FL+AE  R G     +    G+ A VD++A++++  +WRQ   D      P   KL  ++E+L G ++  AHNAM DV  L +V++   + +RWR +AS
Sbjct:   12 ELVQLLRTGPQ-ALKGIGPKMCAYLEKLDIRTIADLLLHLPTGYIDRRRSCPIADAEPGDVLTLIVKVTAISEKA-----------RTCVITCADKHGTPIDLVYYVSPYLGIWRGTKAVLPIGALRVISGKVDVNAVSGRMEMRQPDIVRPYEDLTQVLIVESQYRLTKGLHPKKMRETVAGALDAVEEKARLVGEDWGWDDSYSSYSSAQLSSAXXXXXXDGDASIGNG---IMRALREVHFPQSPQDLLHSSPARARLAYDELLAGQVLLARRRRVAKGRKRGAPVIPLDQGERAVH-PPGEEADHTHVSAAQ-SALTDDMRGSERALPGEGGQGGGGRGGLARELLEGLPFELTECQRSALEEIAGDMAGGE-----RMVRLLQGDVGSGKTLVALVALLRVVEAGLQGCLLAPTEVLAAQHAGTIARLC---DRHLGEGRVRVGLLTGAVRGRERAAVLSELREGAIDVLVGTHAVYGPAVHFKAXXXXXXXXXXXXXXXXXXXXXXXXXXXALGLAVVDEEQRFGVAQREALVNGKSHTTPTAAIANSADDSNSDSHLPPRQLQCHVLYMSATPTPRTLSLTAFGDVDVALLREKPRGASQHVQTTLTVERVRAILD--DPATAHADKVFWVLPLVQEAPSGGTRRRAHLASAERRHASLAEALGEERVGLLHGRMTAAEKNRVLARF--AEPGSPMRVLVATTIIEVGVDIPEARVCVIENAEQFGLSQLHQMRGRIGRSGXXXXXXXXXXXXXATARSDAAARAVEGAAAACHCVLLYHESAGEVAVRRLKVMSETTDGFAIAEEDLKLRGPGELLGVRQKGFLFGGAGGFRVCDLDKHAALVPPAHAHARRLVEA-----------------------AGARSXXXXXXXXGDVRPLCALHLLSALFQSGAGAEAQGSSAQQAGGGKRPAI-AANGVALPVKGARKAGSGXXXXXXXXXEQEQDVVRGVGLEVAHALGLDAA-----LLSSEPTHGVGQHASDGGDATESRQLLAAALSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTSETTVVSEALRVELFIPE--RTSRALPTSATERAAXXXXXXXAWPFENLSDYAPADDEEDVVASTSDNDWLSFSELPP-------------------IPRQ---AGGLRLKAAPSASARGSKAADTPSLPPLDLTSEEHMFVVLDVETTGFSFAYDRVLQIAAAVLSVDGGGALQHGH-FNMYCDP-AKYISAKIQGLTGITPQLLRSKGAVKFPQAWQQFQAWLNAAAAQHKATNGNATSGTSIVLIAHNANFDHGFLVAETERAGLGSDAISS-AGITAFVDSVALVKDRDLWRQAGMD-----PPPTNKLTDVYEYLEGRKVSDAHNAMADVIALATVVNGSVLRDRWREMAS 1412          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A3M1JVB7_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JVB7_9PROT)

HSP 1 Score: 481 bits (1239), Expect = 5.050e-149
Identity = 308/714 (43.14%), Postives = 410/714 (57.42%), Query Frame = 0
Query:  219 LKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRA 930
            L GVG + A  LA++GI  V +LLWHLPTGMVDRRH  RV D  +G IAT+ ++VA         P P  R  +  RV C D D   +D+V F      ++     G  +V+SG+V  + F G + MS PD +    D D++  ++P YPLTAGL+   LR AI  ALD   ++    EW+ P      GWP  R A+ AAH P     L    P R+RLAYDELLA+QL LAL R + R  +      DG    R E +              LPF LT  Q   L+EI  DM          M RL+QGDVGSGKT VA LAML A   GAQ+ +LAPTE+L  QH  TL  +A           +R+ LLTG  KGK+R+ +LDD+ +G++DILV THA++     AFRDLGLAV+DE+ RFGV QR +LT  G    VL ++ATPIPR+L+L  YGDM++S+I E P G   +ET  IP  +  D+V  +   + +  + +WV P + +SE+S    +A+A  RY+AL + + GD+V L+HGKM +AE++  +++F+       + +LV+T++IEVGVDVP A + V+E+AE FGL+QLHQLRGR+GR                          S C+LLY   +S  A  RL+ +R T DGF +AE DL LRGPGEVLG RQ G  E  F++ADLA    L   A K A
Sbjct:   16 LPGVGGRTAAHLARMGIARVVDLLWHLPTGMVDRRHSPRVKDAGDGVIATLTVEVAR------HHPAPP-RGRRPYRVKCFD-DSGTIDIVFFHANRDYIQEMLPEGAVRVISGKV--EHFHGQVQMSHPDYILRPEDRDRIPALEPVYPLTAGLSGKVLRKAITAALDTAPDLQ---EWLEPAHQARQGWPDWRRAITAAHAPDHPRHLLPESPARARLAYDELLANQLALALVRERLRKRKGRAFTGDGHLRRRVEDA--------------LPFALTGDQRAVLEEIAEDMA-----RPEAMLRLVQGDVGSGKTLVALLAMLIAVEAGAQAALLAPTEILARQHAATLAPLAAA-------AGVRLALLTGRDKGKSRRAILDDLASGEIDILVGTHALI-ERDVAFRDLGLAVIDEQHRFGVHQRLKLTSKGRGVDVLVMTATPIPRTLSLTAYGDMDVSRIIEKPPGRKPVETRTIPAARLDDVVAAIGRALKSGARAYWVCPLVEESETSD---MAAAEARYKAL-KAIYGDQVGLVHGKMKAAERDAVMADFAAGR----IALLVATTVIEVGVDVPEATIMVIEHAERFGLAQLHQLRGRVGRGG----------------------DRSTCLLLYAGPLSETARARLRTMRETDDGFRIAEEDLRLRGPGEVLGTRQSGLPE--FRIADLAHHEDLLATARKDA 657          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A1G7A333_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Rhodospira trueperi TaxID=69960 RepID=A0A1G7A333_9PROT)

HSP 1 Score: 478 bits (1230), Expect = 1.120e-147
Identity = 312/733 (42.56%), Postives = 424/733 (57.84%), Query Frame = 0
Query:  208 LAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLR----SAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLV 934
            L +    P  +LKGVG + A  + KL    V ++LWHLPTG++DRRH  +VA+ V G IAT++L V     +  + P P  R     R+   D  G  + +V F      +     +GE + VSGR+  + ++    M+ PD VAP+++L ++  V+P +PLT GL   +LR    SA+A  L   E+ P   EW++P V+  +GWP+  EAL AAH P+++D L L  P R RLAYDELLA+QL L + R + R              ER   +  G  +L D     LPF+LT +Q + LD+I  DM         RM RLLQGDVGSGKT VA+LAML A   GAQ+ ++APTE+L  QH  TL  +A           +R+ LLTG  KG AR+  L D+  G++ +LV THA L  A   FRDLGL V+DE+ RFGV+QR  L+  G    VL ++ATPIPR+LTL +YGDM++S + E P G   IET L+   +  ++V  L+  +G  +KV+WV P +  SE+     LA+A  RYE L    GG RV L+HG+M  AEK+  ++ FS    GEG+ +LV+T++IEVGVDVP A V V+E+AE FGL+QLHQLRGR+GR     +GK                  S C+L+Y   +   A ERLK IR T DGF +AE DL LRG GEVLG RQ G  +  F++ADL     L   A+  A+ +V
Sbjct:    5 LLYPLFQPITSLKGVGGRVAPLIEKLAGPKVVDVLWHLPTGVIDRRHRPKVAEAVPGRIATLVLTV-----DEHRPPPPASRAPY--RIAASDETGT-LTLVFFRASRDYMMKLLPIGEQRAVSGRI--EYYNDLPQMAHPDHVAPVSELAEIQTVEPVHPLTQGLTPKTLRKVVESALAAGLKVAEQTP---EWLDPSVLERHGWPAWGEALRAAHHPEDEDALSLHSPARQRLAYDELLATQLALIVVRAKMR--------------ERPGRARVGDGSLRDTALAALPFDLTGAQRRALDDIAADMA-----KPARMLRLLQGDVGSGKTVVAWLAMLGALEAGAQAALMAPTEILARQHWTTLAPLAEA-------AGVRLALLTGRDKGAAREETLADLAEGRIQVLVGTHA-LFQADVTFRDLGLVVIDEQHRFGVDQRLGLSAKGRDADVLVMTATPIPRTLTLTMYGDMDVSCLDEKPPGRQPIETVLLSSQRLPEVVDALRRAIGGGNKVYWVCPLVEDSETLD---LAAAESRYEDLRARFGG-RVGLVHGRMKPAEKDSVMARFS----GEGVDILVATTVIEVGVDVPAATVMVIEHAERFGLAQLHQLRGRIGRG----SGK------------------SSCLLMYQGPLGDIARERLKVIRETEDGFRIAEEDLRLRGAGEVLGTRQSGLPD--FRLADLEAHADLLAMASDDAKLIV 665          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A6M8VV20_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VV20_9PROT)

HSP 1 Score: 477 bits (1227), Expect = 2.670e-147
Identity = 300/723 (41.49%), Postives = 414/723 (57.26%), Query Frame = 0
Query:  217 KALKGVGPKRAEQLAKL-GIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGG--PWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLTGFAQH--VLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLV 934
            +ALKGVGP+ A+ + KL G   +A+LLWHLP   +DRR   ++A+   G I T+ +K+         K  P    ++  R+ C D  G  +D+V F    PW  ++ +F +G T+++SG   A+ F G L M  P++V   A+ DK+  V+P YP+TAGL    +   I+     L +VP  PEW++   + +  WP  REA++ AH P+ ++DL    P R RLAYDELLA+QL + L R  NR       +  G A     M   G   + D  R  LPF LTS+Q + + EI  DM        +RM RLLQGDVGSGKT VAF AML A   GAQ+ ++APTE+L  QH +T+   A  +        L   +LTG  KGKARQ +L+ +  G   I++ THA+       F DLGLAVVDE+ RFGV QR +L G  +   +L ++ATPIPR+LTL  YGDM+ S++ E P G   I+T L+   + +++V  LK ++ TD + +W+ P + +SE      LA+A ER+  L +++ GDR  LLHG+M +AEK+  +  F   E    + VLVST++IEVGVDVP A V V+E+AE FGLSQLHQLRGR+GR+D                      + S CIL+Y P I     +RL  IR T DGFL+AE DL LRG GE+LG RQ G  E  FK+A+L     L   A   AR ++
Sbjct:   14 RALKGVGPRTAKLVEKLVGSEKLASLLWHLPVRYIDRRFAPKIANAPNGRIVTLTVKI--------DKHIPAPSRARPYRIRCSDETGT-VDLVYFHAKKPW--LEAQFPIGATRIISGE--AEYFHGTLQMPHPEMVGTEAERDKIEIVEPVYPMTAGLTHRMMHKIIS---QTLPQVPVLPEWLDAAFLAQEKWPGWREAVLKAHHPESEEDLSPRKPERERLAYDELLANQLAITLVRNHNR-------QIGGRA-----MGPPG--KMADTLRKALPFQLTSAQERAIKEINADMH-----EPMRMLRLLQGDVGSGKTVVAFFAMLNAVASGAQAALMAPTEILAQQHSKTISDYAATL-------GLETVILTGRHKGKARQEILEKIADGSAKIIIGTHALFQD-DVIFHDLGLAVVDEQHRFGVHQRLKLAGKGKDCDILVMTATPIPRTLTLTAYGDMDFSRLDEKPAGRKPIDTRLVSTARLEEVVAGLKRKIETDARAYWICPLVEESEVMD---LAAAEERWLTL-QQVFGDRTGLLHGRMNAAEKDAVMQRFVAGE----IDVLVSTTVIEVGVDVPEATVMVIEHAERFGLSQLHQLRGRVGRSD----------------------EESACILVYDPKIGETGKKRLTTIRNTEDGFLIAEEDLKLRGAGELLGTRQSGMPE--FKLANLHDHARLVKIARDDARLII 661          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A7W9ZG52_NOVIT (ATP-dependent DNA helicase RecG n=2 Tax=Novispirillum itersonii TaxID=189 RepID=A0A7W9ZG52_NOVIT)

HSP 1 Score: 474 bits (1220), Expect = 2.780e-146
Identity = 311/729 (42.66%), Postives = 420/729 (57.61%), Query Frame = 0
Query:  206 ESLAFLSSPPEKALKGVGPKRAEQLAKL-GIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRAR 931
            ESL  L SP E +L G+G + A   A+L G   V + LWHLP G++DRR+   VA+  +G IAT+ ++V T      +   P+       RV C D  G            W ++    VG T V+SGRV  + F G   M  PD V   A  +++  V+P YPLTAG+     + A   A   L  VP  PEW++P       WP   EAL  AH P  +DDL    P R RLAYDELLA+QL L L R  +R         DG       + A+  AAL        PF+LT +Q+++L+EI  DM      +  RM RL+QGDVGSGKT VA +AML A   G+Q+ ++APTE+L  QH +TL  +A  I        +R+ +LTG  KGK R  LL+ + AG++DILV THA+  S    FRDLGLAV+DE+ RFGV+QR  LT  G    VL ++ATPIPR+LTL LYGDM++S++ E P G   ++T L+ + + ++++  +   V    KV+WV P + +SE+S    LA+A ER+ A++++L G R+ L+HGKM +AEK+  ++ FS    G+GL VLV+T++IEVGV+VP A V V+E+AE FGL+QLHQLRGR+GR D+  T                      C+LLYG  +S     RL+ +R + DGFL+AE DL LRG GEVLG RQ G  E  F+VADLA  G L   A   AR
Sbjct:    4 ESLYPLFSPLE-SLPGLGKRLAPLYARLVGGEHVVDALWHLPVGLIDRRYSPAVAEAPDGRIATLTVQVDTHYPPPPRSRSPY-------RVRCRDHSGFITLTYFHPRADW-LERTLPVGATVVISGRV--EVFGGERQMPHPDHVVSPAKREEIQTVEPVYPLTAGIVG---KVAAKCARSALARVPDLPEWLDPAYQARQNWPGWTEALRTAHSPAGEDDLSALTPARQRLAYDELLANQLALLLVRNASRAISGRSFAGDGR------LRAAAAAAL--------PFSLTGAQSRSLEEIYVDMQ-----TPQRMLRLVQGDVGSGKTVVALMAMLNAVECGSQAALMAPTEILARQHAETLHPLAEAI-------GIRLAVLTGRDKGKPRAALLEALAAGEIDILVGTHALFQS-DVQFRDLGLAVIDEQHRFGVQQRLELTAKGRMTDVLVMTATPIPRTLTLTLYGDMDVSKLDEKPPGRKPVDTRLVSLSRLEEVMAGVGRAVAAGAKVYWVCPLVEESETSD---LAAAEERH-AVLQDLYGSRIGLVHGKMKAAEKDAVMAAFS----GDGLDVLVATTVIEVGVNVPAATVMVIEHAERFGLAQLHQLRGRIGRGDKAST----------------------CLLLYGGPLSETGKARLEIMRQSEDGFLIAEEDLRLRGGGEVLGTRQSGLPE--FRVADLAVHGELLATARDDAR 659          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A7W6RD52_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Roseospira visakhapatnamensis TaxID=390880 RepID=A0A7W6RD52_9PROT)

HSP 1 Score: 471 bits (1213), Expect = 3.070e-145
Identity = 312/732 (42.62%), Postives = 419/732 (57.24%), Query Frame = 0
Query:  208 LAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHV--RVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALD-KLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLV 934
            L +    P  +LKGVGP+ A  + KL    V + LWHLPTG++DRR+  +V + + G +AT++L   TV  +    PG     RV+  +  G + L       V F      ++    VGE +VVSGR+  + ++    M+ PD V P++DL  +  V+P +PLT GL    L   +  ALD  L      PEW++P V+   GWPS  EAL AAH P +   L    P R+RLAYDELLASQL L L R   R              ER   S +G   L D     LPF LT +Q + +DEI  DM         RM RLLQGDVGSGKT VA+LAML A   GAQ+ ++APTE+L  QHL+T+  +A  +        +R+ LLTG  KGKAR+ L+  V AG V +L+ THA L  A  AF DLGL V+DE+ RFGV+QR  L+  G A  VL ++ATPIPR+LTL  YGDM+IS++ E P G   ++T ++P  +   +++ ++  + T +KV+WV P + + E+S    LA+A  RYE L   LGG RV L+HG+MT+AEK+  +  F+     EG+ VLV+T++IEVGV+VP A V V+E+AE FGL+QLHQLRGR+GR     TG+                  S C+LLY   +   A ERLK IR + DGF +AE DL LRG GEVLG RQ G     F++ADLA    L   A   A+ + 
Sbjct:    5 LLYPLFQPIDSLKGVGPRIAPLVKKLMGPKVVDALWHLPTGIIDRRNRPKVTEAMPGTVATLVL---TVDEHRPAPPGSRAPYRVAASDETGTLTL-------VFFRAKRDYLERLLPVGEQRVVSGRI--EVYNDLPQMAHPDHVVPVSDLASIQTVEPVHPLTQGLTPKILGKVVGAALDFGLTVARTAPEWLDPTVVAREGWPSWGEALQAAHHPADHAALEPLSPARARLAYDELLASQLALILVRASLR--------------ERAGRSLTGDGGLRDTALAALPFALTGAQRRAVDEIAADMA-----RPARMMRLLQGDVGSGKTVVAWLAMLVALEAGAQAALMAPTEILARQHLETIAPLAEAV-------GVRIALLTGRDKGKAREDLVAAVAAGDVRVLIGTHA-LFQADVAFHDLGLVVIDEQHRFGVDQRLGLSSKGRATDVLVMTATPIPRTLTLTHYGDMDISRLDEKPPGRQPVDTRVLPQDRLPQVIEAIQRAIATGNKVYWVCPLVEELETSD---LAAAESRYEDLRGVLGG-RVGLVHGRMTAAEKDAVMERFTR----EGVDVLVATTVIEVGVNVPAATVMVIEHAERFGLAQLHQLRGRIGRG----TGQ------------------STCLLLYQGPLGEVARERLKVIRDSEDGFFIAEEDLRLRGGGEVLGTRQSGLPA--FRLADLATHTDLLAMARDDAKLIA 665          
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A2E8XN49_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XN49_9PROT)

HSP 1 Score: 470 bits (1210), Expect = 9.330e-145
Identity = 303/730 (41.51%), Postives = 419/730 (57.40%), Query Frame = 0
Query:  208 LAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLVE 935
            + F    P  ALKGVG +    L +L    + +LLW LP G++DRR+   ++DL  G +AT+ L VA         P P        R+ C D  G+ + +V F G    +      GE +++SG  T++ + G L M+ PD++A  A+ D VM VQP YPLT GL+   L  AIA AL++L   P  PEW++P +  E  WP  ++A++AAH P E +DL     +R RLAYDELLASQL + L R   R        SDG               L ++  G LPF LT SQ   +D+I++D+G     S  RM RLLQGDVGSGKT VA +AML A   G Q+ ++APTE+L  QH  T+  +A          N+   LLTG  KGKAR  +L+ +  G V ++V THA L     AF DL +AVVDE+ RFGV QR  L   G A  VL ++ATPIPR+L LA YGD++ SQ+RE P G   ++T+   V + +D +  ++ ++    KVFWV P + +SE+   + +A+AT+R+ AL +  G D+V L+HG+M+  +K+  +S F+ +E+   L +LV+T++IEVGVDVP A V +VE+AE FGL+QLHQLRGR+GR +R  T                      C+LLYG  I   A ERL  +R T DGF +AE+DL LRG G+VLG RQ G  +  F++ DLA  G L   A   AR ++E
Sbjct:    9 ILFPLFAPVTALKGVGSRIGAHLERLAGAQIVDLLWQLPGGIIDRRYSPVLSDLEPGRVATLELTVAK------HHPPPVANRRIPYRIDCFDGTGE-ITLVFFHGRSDYLTSVLPEGEVRLISG--TSELYDGKLQMTHPDIIAKPAERDTVMRVQPVYPLTEGLSQNVLGKAIAGALERL---PALPEWLDPALAGERAWPDWKDAVLAAHTPNEAEDLEPVSASRMRLAYDELLASQLAIMLIRSHVRRQPGLPVASDGH--------------LREQVLGALPFALTGSQRTAIDDIVSDLG-----SDHRMLRLLQGDVGSGKTVVALMAMLTAVEAGRQAALMAPTEILAQQHYATIAPLAEA-------ANVPCVLLTGRDKGKARDAILEKLADGTVPLVVGTHA-LFQGDIAFHDLAVAVVDEQHRFGVHQRLLLADKGSAVDVLLMTATPIPRTLMLAAYGDLDESQLREKPAGRKPVKTSTASVDRLEDAISGVRRQLDAGGKVFWVCPLVEESET---EDVAAATQRHSALQDRFG-DKVGLVHGRMSGKQKDAVMSRFAGSEEP-SLDILVATTVIEVGVDVPDATVMIVEHAERFGLAQLHQLRGRIGRGERDAT----------------------CLLLYGHGIGKTARERLTVLRDTDDGFEIAEQDLRLRGAGDVLGTRQSGLPD--FRLVDLAAHGELLAVARDDARLIIE 670          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXY9_9PHAE0.000e+059.59ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
D7FPN7_ECTSI0.000e+060.20ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
A0A4D9CQG2_9STRA1.650e-15231.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CEI0_9STRA7.190e-15232.26ATP-dependent DNA helicase RecG n=1 Tax=Tribonema ... [more]
A0A3M1JVB7_9PROT5.050e-14943.14ATP-dependent DNA helicase RecG n=1 Tax=Alphaprote... [more]
A0A1G7A333_9PROT1.120e-14742.56ATP-dependent DNA helicase RecG n=1 Tax=Rhodospira... [more]
A0A6M8VV20_9PROT2.670e-14741.49ATP-dependent DNA helicase RecG n=1 Tax=Proteobact... [more]
A0A7W9ZG52_NOVIT2.780e-14642.66ATP-dependent DNA helicase RecG n=2 Tax=Novispiril... [more]
A0A7W6RD52_9PROT3.070e-14542.62ATP-dependent DNA helicase RecG n=1 Tax=Roseospira... [more]
A0A2E8XN49_9PROT9.330e-14541.51ATP-dependent DNA helicase RecG n=1 Tax=Alphaprote... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 1295..1500
e-value: 2.6E-7
score: 40.3
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 1297..1425
e-value: 2.1E-12
score: 47.9
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 493..694
e-value: 5.8E-20
score: 82.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 516..683
score: 18.526
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 743..830
e-value: 1.4E-13
score: 61.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 746..829
e-value: 7.1E-11
score: 42.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 702..896
score: 12.78
IPR033454RecG, wedge domainPFAMPF17191RecG_wedgecoord: 217..382
e-value: 5.9E-12
score: 45.5
NoneNo IPR availableGENE3D3.40.50.300coord: 692..893
e-value: 8.9E-37
score: 128.1
NoneNo IPR availableGENE3D2.40.50.140coord: 253..354
e-value: 9.3E-8
score: 33.8
NoneNo IPR availableGENE3D3.40.50.300coord: 443..685
e-value: 1.0E-62
score: 213.5
NoneNo IPR availableGENE3D1.10.150.20coord: 206..252
e-value: 4.0E-5
score: 25.5
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 494..831
coord: 853..908
NoneNo IPR availablePANTHERPTHR14025:SF29TRANSCRIPTION-REPAIR-COUPLING FACTORcoord: 494..831
coord: 853..908
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..1560
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.927
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 500..665
e-value: 1.2E-13
score: 51.2
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1294..1497
e-value: 3.3E-29
score: 104.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 435..687
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 629..834
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 217..389
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1294..1489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2123312..2136812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1273.1mRNA_C-linearis_contig11.1273.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2123269..2137898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1273.1 ID=prot_C-linearis_contig11.1273.1|Name=mRNA_C-linearis_contig11.1273.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1561bp
MWTVGRALHIVALLALLPRCCCALGGTCQSVGGRAERGGRVVALQRLVSN
QPLERATRRPLSTAASRTASRASFVGVGGGNMHARRMLTAHVWRTATSRR
VLARPVAGLTRLQAVGSSGGGSGTKPSSTSSAVDAKQAQKVGAGRSTSRA
AGAGASAAAASAGPGTVPDGVKKASPRQAKRATAERKKGATLAGGGDGSE
QYVYTESLAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMV
DRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVD
LDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDV
VAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWIN
PEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTL
ALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSS
QNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQG
AQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKAR
QVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDR
LTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPV
GKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVE
ELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDV
PRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQE
KRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLG
VRQKGYIEGKFKVADLARQGSLADDANKRARHLVESWVVRGDGDETPAEG
RRGEEGEDTAVAASGIGSGRDDEERGHPQSLGLLLALCGLEADAKALLGG
FKAPASWPLLSAALPSGAANDVVATAVASVEGRREEDIWAEPGEKQAREG
GDAASKGSELPSSVPLGAVAEVAAGNATAFTATAAAAGTPPVAYSLLEYE
EAAKGEAAAVGVEAGNLSEAAERQEQGRREQPPAMPATAYFDDEADFLEK
SASEYAKLMVDQGEDEEYLSAFSFAPPPGFAAEAPPSRATGRVDGMSEAD
RFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQR
SGVVPSEGTAAGGGRSTSDTSPPCGGEGTEPGIIRRANLLEGGQTIVLID
LETTGFGPKNDRVIQLASKVLGSPDPSHLYSAYVDPEGAYLSPHIQEMTG
ITPAILTANNARAFREVWQDFASWLSGISGEEEAEGRSNGGVVLVAHNAN
FDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLA
RPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRA
VASDHPTCQIPVPRSLADLHAATQAASAPRPKSKAPTLGGGVGSRRSYYT
RRRGTGRRHP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR033454RecG_wedge
IPR011545DEAD/DEAH_box_helicase_dom
IPR036397RNaseH_sf
IPR027417P-loop_NTPase
IPR012340NA-bd_OB-fold
IPR012337RNaseH-like_sf