mRNA_C-linearis_contig11.1273.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE) HSP 1 Score: 1494 bits (3868), Expect = 0.000e+0 Identity = 895/1502 (59.59%), Postives = 1036/1502 (68.97%), Query Frame = 2
Query: 302 MLTAHVWRTATSRRVLARPVAGLTRLQAVGSSGGGSGTKPSSTSSAVDAKQAQKVGAXXXXXXXXXXXXXXXXXXXGPGTVPDGVKKASPRQAKRATAERKKGATLAGGGDGS---EQYVYTESLAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVP-FPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGE------RGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDK----VFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATP-------SPEEMP-QEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLVESWVVRG-----DGDETPAEGRRGEEGEDTAVAASGIGSGRD-DEERGHPQSLGLLLALCGLEADAKALLGGFKAPASWPLLSAALPSGAANDVVATAVASVEGRREEDIWAEPGEKQAREGGDAASKGSELPSSVPLGAVAEVAAGNATAFTATAAAAGTPPVAYSLLEYEEAAKGEAAAVGVEAGNLSEAAERQEQGRREQPP---AMPATAYFDDEADFLEKSASEYAKLMVDQGEDEEYLSAFSFAPPPGFAAEAPPSRATGRVDGMSEADRFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQRSGVVPSEGTAAGGGRSTSDTSPPCGGEGTEPGIIRRANLLEGGQTIVLIDLETTGFGPKNDRVIQLASKVLGSPDPSHLYSAYVDPEGAYLSPHIQEMTGITPAILTANNARAFREVWQDFASWLSGISGEEEAEGRSNGGVVLVAHNANFDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLARPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRAVASDHPTCQIPVPRSLADLHAATQAASAPRPKSKAPTLGGGVGSRRSYYTRRRGTGR 4714
ML H WRT +RRVL RP GL RLQ VGS K S++S V A++ ++ G DG K + PRQA++AT A GG G+ E Y Y E+L++LSSPPE ALKGVGP++AEQLAKLG+ +VA+LLWHLPTGMVDRR S VADLVEGE+AT+LLKV V ++ P R ++ RV CVD+ DK+D+V+FGG W + +E GETKVVSG+VT DK+S +LVM+ P+VVAP ADL+KV+ +QPTYPLTAGL+ SLRS IALALD+LE V FPPEWI+ E MRE+GWPSLREAL AAH PQ+++DL SG TRSRLAYDELLASQ+ LALRRR RG + G+ G+ GEM+ +GGAALV+EGR RLPF+LTSSQNK LDEIL DM G GSC SLRMFRLLQGDVGSGKTAVAFLAML+AAGQG+QSCMLAPTEVLT QHLQTLRSMA GIERPDG+GNLRVELLTG+VKGK+RQ LL+DVKAG+VDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRD+LTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMP+GAA IETTL+PV KAK+++ RLK R TDDK VFWVLPQINKSESS+RQHLASATERY+ALV+ELG DRV+LLHGKMTSAEKN+RLSEFS EKG+GLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGK ++ TA +PEE P Q+KRQ+SHCILLYGPD+ DATERLKA+R TRDGFLLAERDLALRGPGEVLG+RQKGYIEGKFKVADLARQGSLA+ A+KRAR LVESW RG D ++ A G + G VA G G D DEE G P+SLGLLL LCGL ADA+ALL GF + P GAA+ A VA E R AE E++A+E A + +E P S+P+ A G + T+T AA PP+A S + + EA A GV G L R ++P A+PA YFDDEADFLEKSASEYA++M DQ E++EYLS FSFAPP F SG V GT GG GEG IIRRA+L EG T+V++D+ETTG K DRVIQLA+KVLGS +P H ++ Y+DP + P ++E+TGITP IL AN AR F +VW +FA+WLSG+ EE+AEGR GGVV VAHNA FDHKFL E R GF +FMMGQDMGVV +VD+L L+E S+WRQ +D P+RP+ FKL +FEHLYGY MP AHNAMGDV GLE +LSAPGI+E WR VAS HP CQIPVPRSLA+L AAT A+ R T G YY RR TGR
Sbjct: 1 MLGRHAWRTTAARRVLTRPNFGLYRLQTVGSGA----PKRGSSTSTVAARELRR--ETSSSGNNASDEFAATGTGYGTAATRDGKKGSGPRQARKATTGV---AAARRGGKGAVVDESYAYAETLSYLSSPPEDALKGVGPRKAEQLAKLGVTTVADLLWHLPTGMVDRRETSHVADLVEGEVATMLLKVVKVQSD------PRWRSPRITRVHCVDVAEDKIDIVMFGGSW--LCKNYEPGETKVVSGKVTMDKYSESLVMTMPEVVAPAADLEKVLVIQPTYPLTAGLSGSSLRSVIALALDQLEGVTHFPPEWIDQETMREHGWPSLREALSAAHSPQQEEDLRPSGATRSRLAYDELLASQIVLALRRRHTRGIGGGVSGGRGDQGDGSAAAATGEMARAGGAALVEEGRRRLPFDLTSSQNKALDEILKDMDGSGSCRSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTGQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKSRQQLLNDVKAGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPRGAANIETTLVPVAKAKEVMDRLKGREDTDDKARCGVFWVLPQINKSESSARQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNRRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPATPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAADTEDAAASGAPRKGG---TVALKEGGPGADCDEEGGRPESLGLLLVLCGLGADAEALLSGFASRTPLP--------GAADGDAAGVVAGGEADR----GAEAIEREAKE--HAPERATEFPQSLPVAAATPD--GVESLITSTPAA--DPPLAASSSTPDFVVRAEATA-GV-GGVLDSRTTTGPDSRSKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEDQDEEDEYLSGFSFAPPLQPXXXXXXXXXXXXXXXXXXXXXF------------------------------------------------SGGVAPTGTPVGGXXGAPS------GEGVA--IIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYIDPGVVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEELSRCGFSRFMMGQDMGVVCIVDSLRCLKENSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPNAHNAMGDVVGLERILSAPGINEGWRGVASSHPACQIPVPRSLAELQAATNIAARSRKPPARRTKADGW----RYYNNRR-TGR 1401
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: D7FPN7_ECTSI (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN7_ECTSI) HSP 1 Score: 1077 bits (2786), Expect = 0.000e+0 Identity = 652/1083 (60.20%), Postives = 744/1083 (68.70%), Query Frame = 2
Query: 1526 FNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATP-------SPEEMP-QEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLVESWVVRG-------DGDETPAEGRRGEEGEDTAVAASGIGSGRD-DEERGHPQSLGLLLALCGLEADAKALLGGFKAPASWPLLSAALPSGAANDVVATAVASVEGRREEDIWAEPGEKQAREGGDAASKGSELPSSVPLGAVA--EVAAGNATAFTATAAAAGTPPVAYSLLEYEEAAKGEA-AAVGVEAGNLSEAAERQEQGRREQPP-AMPATAYFDDEADFLEKSASEYAKLMVDQGEDEEYLSAFSFAPPPGFAAEAPPSRATGRVDGMSEADRFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQRSGVVPSEGTAAGGGRSTSDTSPPCGGEGTEPGIIRRANLLEGGQTIVLIDLETTGFGPKNDRVIQLASKVLGSPDPSHLYSAYVDPEGAYLSPHIQEMTGITPAILTANNARAFREVWQDFASWLSGISGEEEAEGRSNGGVVLVAHNANFDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLARPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRAVASDHPTCQIPVPRSLADLHAATQAASAPRPKSKAPTLGGGVGSRRSYYTRRRGTGR 4714
+ LTS + KT ++L DM G GSCSSLRMFRLLQGDVGSGKTAVAFLAML+AAGQG+QSCMLAPTEVLTVQHLQTLRSMA GIERPDG+GNLRVELLTG++KGKARQ LL+DVK+G+VDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRD+LTGFAQHVLYLSATPIPRSLTLAL+GDMEISQIREMP+G A IETTLIPV KAK+++ RLK R TDD KSESS+RQHLASATERY+ALV+ELG DRV+LLHGKMTSAEKNKRLSEFS EKG+GLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGK ++ TA SPEE P Q+KRQ+SHCILLYGPD+ DATERLKA+R TRDGFLLAERDLALRGPGEVLG+RQKGYIEGKFKVADLARQGSLA+ A+KRAR LVESW RG D +E A G G VA G+G D DEERG P+SLGLLL LCGL ADAKALL GF A + P P GA D A G E++A+E A + +ELP S P+ A +V + N T+T AA P + S ++ A+ EA AAVGV ++ A G+ P A+PA YFDDEADFLEKSASEYA++M Q E++EYLS FSFAP + + P PVG A GG S GEG IIRRA+L EG T+V++D+ETTG K DRVIQLA+KVLGS +P H ++ +VDP + P ++E+TGITP IL AN AR F +VW +FA+WLSG+ EE+AEGR GGVV VAHNA FDHKFL E R GF +FMMGQDMGVV +VD+L L+E S+WRQ +D P+RP+ FKL +FEHLYGY MP AHNAMGDV GLE +LSAPGI+E WR VAS HP+CQIPVPRSLA+L AAT A+ R T G YY RR TGR
Sbjct: 18 YRLTSLRVKT--KVLKDMEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSIKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDTDD----------KSESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPASPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAAAADAEEAAASGAPRVGG---TVALKEGGAGADYDEERGRPESLGLLLVLCGLGADAKALLSGF-ASRTPP------PGGADGDAAGVAA----GXXXXXXXXXXREREAKE--HAPQRATELPQSFPVAAATPDDVESLN----TSTPAADAPPASSSSAPDFAARAEAEATAAVGVSGSRMT--AGPGSSGKEPGPELAVPAAVYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXXXXXSS----------------------------------GEVAPTGPPVG---------------ADGGASR--------GEGVA--IIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEFVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSHPSCQIPVPRSLAELQAATNIAARTRKPPARRTKADGW----RYYNNRR-TGR 1002
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A4D9CQG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQG2_9STRA) HSP 1 Score: 509 bits (1311), Expect = 3.540e-150 Identity = 439/1405 (31.25%), Postives = 641/1405 (45.62%), Query Frame = 2
Query: 698 LKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWK------VKGEFEVGETKVVSGRVTADKFSG-NLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPP----------------EWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNR-----GAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIE---------------------------RP-----------DGQGN---LRVELLTGNVK-GKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRV--GTDDKVFWVLPQINKSESSSRQH-----------------LASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGD---ATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLVESWVVRGDGDETPAEGRRGEEGEDTAVAASGIGSGRDDEERGHPQSLGLLLALCGLEADAKALLGGFKAPASWPLLSAALPSGAANDVVATAVASVEGRREEDIWAEPGEKQAREGGDAASKGSELPSSVPLGAVAEVAAGNATAFTATAAAAGTPPVAYSLLEYEEAAKGEAAAVGVEAGNLSEAAERQEQGRREQPPAMPATAYFDDEADFLEKSASEYAKLMVDQGEDEEYLSAFSFAPPPGFAAEAPPSRATGRVDGMSEADRFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQRSGVVPSEGTAAGGGRSTSDTSPPCGGEGTEPGIIRRANLLEGGQ-TIVLIDLETTGFGPKNDRVIQLASKVL-------------------------GSPDPSHLYSAYVDPEGAYLSPHIQEMTGITPAILTANNARAFREVWQDFASWLSGISGEEEAEGRSNGGVVLVAHNANFDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLARPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRAVASDH 4558
+KGVGP AE L ++GIH+V +LL+HLP G++D V V DL EG+ A+V ++V + ++P + C+D +G +D++ F +K F+ G + G+V K+ +L MS P+ V + V+P Y LT GL LR + AL L+ P P +W+ + WP+ EAL+ H P +D+ S R RLA+DELLA+QL ALRR R A + S + G L +LPF +T+ Q +T++EI DM RM RLLQGDVG+GKT A L ML+A G Q+ MLAPTE+L QH TL+ ++ G++ RP +G+G LR+E+LT N K GKAR+ LL++++ G++DIL+ TH++L S FRDLGL V+DEE RFGV QR++L+ +VLY+SATPIPR+L L YGDME+S++ E P ++ T++ P+ I +RL+ ++ + +KVFWVLP I + SS + + S T+R++A+VE LG + V ++HG+M S K + L +FS RVLVSTS++EVGVDVP A VC+VE+AE FGLSQLHQLRGR+GR G +A + M Q HC+L Y D S + A +RL ++ T DGF +AE+DL LRGPGEVLG RQ G+ F++ DLA+ L D+AN+ AR +S V R +G C +EA A + ++ + + A PS + ++ +K++R PSS +V+ T SLLE + + G +S +++PP L+KS S ++ AP P ++ PP T ++ DRF + P P S + + G+ G P T R + D P I R + LE T ++ D ETTG +++R+IQLA+KVL G P+ L++ YVDP G ++ I E+TGI+ L AR F EVW DF W++ + G + VVLVAHNA FDHK L+ + R D+ + ++ +V ++DTLAV R IW + D P +P F+ L+ +L + AH+A GDV GLE++L P ++++WR+ S H
Sbjct: 80 IKGVGPAAAESLGRMGIHTVLDLLFHLPVGVLDWGQVKLVRDLQEGDTASVAVRVVGHTEAEGRRP---------LTIHCLDSEGSPLDLLFF---LYKRDLRHFYLRRFQEGSVHRLQGKVARAKYGDKSLCMSHPEAVKMDGQRRDNVTVEPIYRLTQGLNANKLRDFLREALRTLQPAPAPASLAPPATAGHPQPLFSDWLKDSFREDKCWPTFHEALLRVHNPSCVEDVHASSKARQRLAFDELLATQLPTALRRAVERKNAVTAASSALASSFSSTSSSLVCAVGGDGHLTGPLIQQLPFQMTAGQKRTVNEIWADMAS----KHGRMVRLLQGDVGTGKTLCALLGMLRAIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQVREMEAVEETRGISAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKALLEELRRGEIDILIGTHSLL-SDEVVFRDLGLTVIDEEHRFGVRQREKLSNDT-NVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVT----RVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGR------GYAVSAKADRKAMDQ--LTECHCVLAYD-DTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKG--FRLVDLAKHEGLLDEANQVARAHADSVVRREEG--------------------------------------------CTVEAVAHGNILEYEGVETLLRIFEAKPSSSGENI---------------------QKESR------------PSSXXXXXXXKVS---------------TQSKNNSLLESTASXXXX---XKLSMGGVS----------KKKPPTS------------LQKSKSAP-------------IANACTAPAPSSISDLPPGWTT-----VTYGDRFE------------------------ISTPPPSSGDEEIEG--GELTLMPGTEPVLST-----RFSIDDLP----------IPRVSIDLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSPSDWGGGEDDEQANQLAAAGLASGGEPEDGLLFNGYVDP-GFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAVRGGKP--------VVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGD-GLPIKPNTFRQGALYRYLLRDDLQNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAH 1265
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A836CEI0_9STRA (ATP-dependent DNA helicase RecG n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI0_9STRA) HSP 1 Score: 511 bits (1315), Expect = 1.600e-149 Identity = 481/1491 (32.26%), Postives = 662/1491 (44.40%), Query Frame = 2
Query: 659 ESLAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGP----WWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVP--FPPEW----------------------INPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRR----QNRGA--------ERTMHESDGEAGERGEMSASGGAALVDEGRGR-------------------------LPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSA---------------------------STAFRDLGLAVVDEEQRFGVEQRDRLTGFAQH----------------------------VLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSS---RQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKT------ATATPSPEEMPQEKRQSS-HCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYI---EGKFKVADLARQGSLADDANKRARHLVESWVVRGDGDETPAEGRRGEEGEDTAVAASGIGSGRDDEERGHPQSLGLLLAL----CGLEADAKAL--LGGFKAPASWPLLSAALPSGAANDVVA--TAVASVEGRREEDIWAEPGEKQAREGG-DAASKGSELPSSVPLGAVAEVAA--GNATAFTATAAAAGTPPVAYSLLEYEEAAKGEAAAVGVEAGNLSEAAERQEQGRREQPPAMPATAYFDDEADFLEKSASEYAKLMVDQGED-------------------------------------EEYLSAFSFAPPPGFAAEAPPSRATGRV---DGMSEADRFRQLQQQQRARRAEHQQVGLDEASKVAAAPRPPSQPQPVAAPVGQTAQRSGVVPSEGTAAGGGRSTSDTSPPC-GGEGTEPGIIRRANLLEGGQTIVLIDLETTGFGPKNDRVIQLASKVL-----GSPDPSHLYSAYVDPEGAYLSPHIQEMTGITPAILTANNARAFREVWQDFASWLSGISGEEEA-EGRSNGG--VVLVAHNANFDHKFLLAEQLRGGFDKFMMGQDMGVVAVVDTLAVLREPSIWRQNPADLARPSRPRLFKLAVLFEHLYGYRMPGAHNAMGDVHGLESVLSAPGISERWRAVAS 4552
E + L + P+ ALKG+GPK L KL I ++A+LL HLPTG +DRR +AD G++ T+++KV +S + + + C D G +D+V + P W K +G +V+SG+V + SG + M PD+V P DL +V+ V+ Y LT GL +R +A ALD +EE +W + + NG + AL H PQ DL S P R+RLAYDELLA Q+ LA RRR + RGA ER +H GE + +SA+ +AL D+ RG LPF LT Q L+EI DM GG RM RLLQGDVGSGKT VA +A+L+ G Q C+LAPTEVL QH T+ + +R G+G +RV LLTG V+G+ R +L +++ G +D+LV THAV A LGLAVVDEEQRFGV QR+ L H VLY+SATP PR+L+L +GD++++ +RE P+GA++ T + V + + I+ DKVFWVLP + ++ S R HLASA R+ +L E LG +RV LLHG+MT+AEKN+ L+ F AE G +RVLV+T+IIEVGVD+P A VCV+ENAE FGLSQLHQ+RGR+GR+ ATA E ++ HC+LLY A RLK + T DGF +AE DL LRGPGE+LGVRQKG++ G F+V DL + +L A+ AR LVE+ A A S + +L LL AL G EA + GG K PA ALP A + +E+D+ G + A G DAA L SS P V + A+ G+AT AAA + E L F P + A P+ AT R A F L A E + ++ + PP +P + AGG R + S G + + + +L V++D+ETTGF DRV+Q+A+ VL G+ H ++ Y DP Y+S IQ +TGITP +L + A F + WQ F +WL+ + + +A G + G +VL+AHNANFDH FL+AE R G + G+ A VD++A++++ +WRQ D P KL ++E+L G ++ AHNAM DV L +V++ + +RWR +AS
Sbjct: 12 ELVQLLRTGPQ-ALKGIGPKMCAYLEKLDIRTIADLLLHLPTGYIDRRRSCPIADAEPGDVLTLIVKVTAISEKA-----------RTCVITCADKHGTPIDLVYYVSPYLGIWRGTKAVLPIGALRVISGKVDVNAVSGRMEMRQPDIVRPYEDLTQVLIVESQYRLTKGLHPKKMRETVAGALDAVEEKARLVGEDWGWDDSYSSYSSAQLSSAXXXXXXDGDASIGNG---IMRALREVHFPQSPQDLLHSSPARARLAYDELLAGQVLLARRRRVAKGRKRGAPVIPLDQGERAVH-PPGEEADHTHVSAAQ-SALTDDMRGSERALPGEGGQGGGGRGGLARELLEGLPFELTECQRSALEEIAGDMAGGE-----RMVRLLQGDVGSGKTLVALVALLRVVEAGLQGCLLAPTEVLAAQHAGTIARLC---DRHLGEGRVRVGLLTGAVRGRERAAVLSELREGAIDVLVGTHAVYGPAVHFKAXXXXXXXXXXXXXXXXXXXXXXXXXXXALGLAVVDEEQRFGVAQREALVNGKSHTTPTAAIANSADDSNSDSHLPPRQLQCHVLYMSATPTPRTLSLTAFGDVDVALLREKPRGASQHVQTTLTVERVRAILD--DPATAHADKVFWVLPLVQEAPSGGTRRRAHLASAERRHASLAEALGEERVGLLHGRMTAAEKNRVLARF--AEPGSPMRVLVATTIIEVGVDIPEARVCVIENAEQFGLSQLHQMRGRIGRSGXXXXXXXXXXXXXATARSDAAARAVEGAAAACHCVLLYHESAGEVAVRRLKVMSETTDGFAIAEEDLKLRGPGELLGVRQKGFLFGGAGGFRVCDLDKHAALVPPAHAHARRLVEA-----------------------AGARSXXXXXXXXGDVRPLCALHLLSALFQSGAGAEAQGSSAQQAGGGKRPAI-AANGVALPVKGARKAGSGXXXXXXXXXEQEQDVVRGVGLEVAHALGLDAA-----LLSSEPTHGVGQHASDGGDATESRQLLAAALSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTSETTVVSEALRVELFIPE--RTSRALPTSATERAAXXXXXXXAWPFENLSDYAPADDEEDVVASTSDNDWLSFSELPP-------------------IPRQ---AGGLRLKAAPSASARGSKAADTPSLPPLDLTSEEHMFVVLDVETTGFSFAYDRVLQIAAAVLSVDGGGALQHGH-FNMYCDP-AKYISAKIQGLTGITPQLLRSKGAVKFPQAWQQFQAWLNAAAAQHKATNGNATSGTSIVLIAHNANFDHGFLVAETERAGLGSDAISS-AGITAFVDSVALVKDRDLWRQAGMD-----PPPTNKLTDVYEYLEGRKVSDAHNAMADVIALATVVNGSVLRDRWREMAS 1412
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A3M1JVB7_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JVB7_9PROT) HSP 1 Score: 481 bits (1239), Expect = 5.810e-147 Identity = 308/714 (43.14%), Postives = 410/714 (57.42%), Query Frame = 2
Query: 698 LKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRA 2833
L GVG + A LA++GI V +LLWHLPTGMVDRRH RV D +G IAT+ ++VA P P R + RV C D D +D+V F ++ G +V+SG+V + F G + MS PD + D D++ ++P YPLTAGL+ LR AI ALD ++ EW+ P GWP R A+ AAH P L P R+RLAYDELLA+QL LAL R + R + DG R E + LPF LT Q L+EI DM M RL+QGDVGSGKT VA LAML A GAQ+ +LAPTE+L QH TL +A +R+ LLTG KGK+R+ +LDD+ +G++DILV THA++ AFRDLGLAV+DE+ RFGV QR +LT G VL ++ATPIPR+L+L YGDM++S+I E P G +ET IP + D+V + + + + +WV P + +SE+S +A+A RY+AL + + GD+V L+HGKM +AE++ +++F+ + +LV+T++IEVGVDVP A + V+E+AE FGL+QLHQLRGR+GR S C+LLY +S A RL+ +R T DGF +AE DL LRGPGEVLG RQ G E F++ADLA L A K A
Sbjct: 16 LPGVGGRTAAHLARMGIARVVDLLWHLPTGMVDRRHSPRVKDAGDGVIATLTVEVAR------HHPAPP-RGRRPYRVKCFD-DSGTIDIVFFHANRDYIQEMLPEGAVRVISGKV--EHFHGQVQMSHPDYILRPEDRDRIPALEPVYPLTAGLSGKVLRKAITAALDTAPDLQ---EWLEPAHQARQGWPDWRRAITAAHAPDHPRHLLPESPARARLAYDELLANQLALALVRERLRKRKGRAFTGDGHLRRRVEDA--------------LPFALTGDQRAVLEEIAEDMA-----RPEAMLRLVQGDVGSGKTLVALLAMLIAVEAGAQAALLAPTEILARQHAATLAPLAAA-------AGVRLALLTGRDKGKSRRAILDDLASGEIDILVGTHALI-ERDVAFRDLGLAVIDEQHRFGVHQRLKLTSKGRGVDVLVMTATPIPRTLSLTAYGDMDVSRIIEKPPGRKPVETRTIPAARLDDVVAAIGRALKSGARAYWVCPLVEESETSD---MAAAEARYKAL-KAIYGDQVGLVHGKMKAAERDAVMADFAAGR----IALLVATTVIEVGVDVPEATIMVIEHAERFGLAQLHQLRGRVGRGG----------------------DRSTCLLLYAGPLSETARARLRTMRETDDGFRIAEEDLRLRGPGEVLGTRQSGLPE--FRIADLAHHEDLLATARKDA 657
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A1G7A333_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Rhodospira trueperi TaxID=69960 RepID=A0A1G7A333_9PROT) HSP 1 Score: 478 bits (1230), Expect = 1.190e-145 Identity = 312/733 (42.56%), Postives = 424/733 (57.84%), Query Frame = 2
Query: 665 LAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLR----SAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLV 2845
L + P +LKGVG + A + KL V ++LWHLPTG++DRRH +VA+ V G IAT++L V + + P P R R+ D G + +V F + +GE + VSGR+ + ++ M+ PD VAP+++L ++ V+P +PLT GL +LR SA+A L E+ P EW++P V+ +GWP+ EAL AAH P+++D L L P R RLAYDELLA+QL L + R + R ER + G +L D LPF+LT +Q + LD+I DM RM RLLQGDVGSGKT VA+LAML A GAQ+ ++APTE+L QH TL +A +R+ LLTG KG AR+ L D+ G++ +LV THA L A FRDLGL V+DE+ RFGV+QR L+ G VL ++ATPIPR+LTL +YGDM++S + E P G IET L+ + ++V L+ +G +KV+WV P + SE+ LA+A RYE L GG RV L+HG+M AEK+ ++ FS GEG+ +LV+T++IEVGVDVP A V V+E+AE FGL+QLHQLRGR+GR +GK S C+L+Y + A ERLK IR T DGF +AE DL LRG GEVLG RQ G + F++ADL L A+ A+ +V
Sbjct: 5 LLYPLFQPITSLKGVGGRVAPLIEKLAGPKVVDVLWHLPTGVIDRRHRPKVAEAVPGRIATLVLTV-----DEHRPPPPASRAPY--RIAASDETGT-LTLVFFRASRDYMMKLLPIGEQRAVSGRI--EYYNDLPQMAHPDHVAPVSELAEIQTVEPVHPLTQGLTPKTLRKVVESALAAGLKVAEQTP---EWLDPSVLERHGWPAWGEALRAAHHPEDEDALSLHSPARQRLAYDELLATQLALIVVRAKMR--------------ERPGRARVGDGSLRDTALAALPFDLTGAQRRALDDIAADMA-----KPARMLRLLQGDVGSGKTVVAWLAMLGALEAGAQAALMAPTEILARQHWTTLAPLAEA-------AGVRLALLTGRDKGAAREETLADLAEGRIQVLVGTHA-LFQADVTFRDLGLVVIDEQHRFGVDQRLGLSAKGRDADVLVMTATPIPRTLTLTMYGDMDVSCLDEKPPGRQPIETVLLSSQRLPEVVDALRRAIGGGNKVYWVCPLVEDSETLD---LAAAESRYEDLRARFGG-RVGLVHGRMKPAEKDSVMARFS----GEGVDILVATTVIEVGVDVPAATVMVIEHAERFGLAQLHQLRGRIGRG----SGK------------------SSCLLMYQGPLGDIARERLKVIRETEDGFRIAEEDLRLRGAGEVLGTRQSGLPD--FRLADLEAHADLLAMASDDAKLIV 665
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A6M8VV20_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VV20_9PROT) HSP 1 Score: 477 bits (1227), Expect = 2.760e-145 Identity = 300/723 (41.49%), Postives = 414/723 (57.26%), Query Frame = 2
Query: 692 KALKGVGPKRAEQLAKL-GIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGG--PWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLTGFAQH--VLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLV 2845
+ALKGVGP+ A+ + KL G +A+LLWHLP +DRR ++A+ G I T+ +K+ K P ++ R+ C D G +D+V F PW ++ +F +G T+++SG A+ F G L M P++V A+ DK+ V+P YP+TAGL + I+ L +VP PEW++ + + WP REA++ AH P+ ++DL P R RLAYDELLA+QL + L R NR + G A M G + D R LPF LTS+Q + + EI DM +RM RLLQGDVGSGKT VAF AML A GAQ+ ++APTE+L QH +T+ A + L +LTG KGKARQ +L+ + G I++ THA+ F DLGLAVVDE+ RFGV QR +L G + +L ++ATPIPR+LTL YGDM+ S++ E P G I+T L+ + +++V LK ++ TD + +W+ P + +SE LA+A ER+ L +++ GDR LLHG+M +AEK+ + F E + VLVST++IEVGVDVP A V V+E+AE FGLSQLHQLRGR+GR+D + S CIL+Y P I +RL IR T DGFL+AE DL LRG GE+LG RQ G E FK+A+L L A AR ++
Sbjct: 14 RALKGVGPRTAKLVEKLVGSEKLASLLWHLPVRYIDRRFAPKIANAPNGRIVTLTVKI--------DKHIPAPSRARPYRIRCSDETGT-VDLVYFHAKKPW--LEAQFPIGATRIISGE--AEYFHGTLQMPHPEMVGTEAERDKIEIVEPVYPMTAGLTHRMMHKIIS---QTLPQVPVLPEWLDAAFLAQEKWPGWREAVLKAHHPESEEDLSPRKPERERLAYDELLANQLAITLVRNHNR-------QIGGRA-----MGPPG--KMADTLRKALPFQLTSAQERAIKEINADMH-----EPMRMLRLLQGDVGSGKTVVAFFAMLNAVASGAQAALMAPTEILAQQHSKTISDYAATL-------GLETVILTGRHKGKARQEILEKIADGSAKIIIGTHALFQD-DVIFHDLGLAVVDEQHRFGVHQRLKLAGKGKDCDILVMTATPIPRTLTLTAYGDMDFSRLDEKPAGRKPIDTRLVSTARLEEVVAGLKRKIETDARAYWICPLVEESEVMD---LAAAEERWLTL-QQVFGDRTGLLHGRMNAAEKDAVMQRFVAGE----IDVLVSTTVIEVGVDVPEATVMVIEHAERFGLSQLHQLRGRVGRSD----------------------EESACILVYDPKIGETGKKRLTTIRNTEDGFLIAEEDLKLRGAGELLGTRQSGMPE--FKLANLHDHARLVKIARDDARLII 661
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A7W9ZG52_NOVIT (ATP-dependent DNA helicase RecG n=2 Tax=Novispirillum itersonii TaxID=189 RepID=A0A7W9ZG52_NOVIT) HSP 1 Score: 474 bits (1220), Expect = 2.700e-144 Identity = 311/729 (42.66%), Postives = 420/729 (57.61%), Query Frame = 2
Query: 659 ESLAFLSSPPEKALKGVGPKRAEQLAKL-GIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRAR 2836
ESL L SP E +L G+G + A A+L G V + LWHLP G++DRR+ VA+ +G IAT+ ++V T + P+ RV C D G W ++ VG T V+SGRV + F G M PD V A +++ V+P YPLTAG+ + A A L VP PEW++P WP EAL AH P +DDL P R RLAYDELLA+QL L L R +R DG + A+ AAL PF+LT +Q+++L+EI DM + RM RL+QGDVGSGKT VA +AML A G+Q+ ++APTE+L QH +TL +A I +R+ +LTG KGK R LL+ + AG++DILV THA+ S FRDLGLAV+DE+ RFGV+QR LT G VL ++ATPIPR+LTL LYGDM++S++ E P G ++T L+ + + ++++ + V KV+WV P + +SE+S LA+A ER+ A++++L G R+ L+HGKM +AEK+ ++ FS G+GL VLV+T++IEVGV+VP A V V+E+AE FGL+QLHQLRGR+GR D+ T C+LLYG +S RL+ +R + DGFL+AE DL LRG GEVLG RQ G E F+VADLA G L A AR
Sbjct: 4 ESLYPLFSPLE-SLPGLGKRLAPLYARLVGGEHVVDALWHLPVGLIDRRYSPAVAEAPDGRIATLTVQVDTHYPPPPRSRSPY-------RVRCRDHSGFITLTYFHPRADW-LERTLPVGATVVISGRV--EVFGGERQMPHPDHVVSPAKREEIQTVEPVYPLTAGIVG---KVAAKCARSALARVPDLPEWLDPAYQARQNWPGWTEALRTAHSPAGEDDLSALTPARQRLAYDELLANQLALLLVRNASRAISGRSFAGDGR------LRAAAAAAL--------PFSLTGAQSRSLEEIYVDMQ-----TPQRMLRLVQGDVGSGKTVVALMAMLNAVECGSQAALMAPTEILARQHAETLHPLAEAI-------GIRLAVLTGRDKGKPRAALLEALAAGEIDILVGTHALFQS-DVQFRDLGLAVIDEQHRFGVQQRLELTAKGRMTDVLVMTATPIPRTLTLTLYGDMDVSKLDEKPPGRKPVDTRLVSLSRLEEVMAGVGRAVAAGAKVYWVCPLVEESETSD---LAAAEERH-AVLQDLYGSRIGLVHGKMKAAEKDAVMAAFS----GDGLDVLVATTVIEVGVNVPAATVMVIEHAERFGLAQLHQLRGRIGRGDKAST----------------------CLLLYGGPLSETGKARLEIMRQSEDGFLIAEEDLRLRGGGEVLGTRQSGLPE--FRVADLAVHGELLATARDDAR 659
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A7W6RD52_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Roseospira visakhapatnamensis TaxID=390880 RepID=A0A7W6RD52_9PROT) HSP 1 Score: 471 bits (1213), Expect = 2.800e-143 Identity = 312/732 (42.62%), Postives = 419/732 (57.24%), Query Frame = 2
Query: 665 LAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHV--RVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALD-KLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLV 2845
L + P +LKGVGP+ A + KL V + LWHLPTG++DRR+ +V + + G +AT++L TV + PG RV+ + G + L V F ++ VGE +VVSGR+ + ++ M+ PD V P++DL + V+P +PLT GL L + ALD L PEW++P V+ GWPS EAL AAH P + L P R+RLAYDELLASQL L L R R ER S +G L D LPF LT +Q + +DEI DM RM RLLQGDVGSGKT VA+LAML A GAQ+ ++APTE+L QHL+T+ +A + +R+ LLTG KGKAR+ L+ V AG V +L+ THA L A AF DLGL V+DE+ RFGV+QR L+ G A VL ++ATPIPR+LTL YGDM+IS++ E P G ++T ++P + +++ ++ + T +KV+WV P + + E+S LA+A RYE L LGG RV L+HG+MT+AEK+ + F+ EG+ VLV+T++IEVGV+VP A V V+E+AE FGL+QLHQLRGR+GR TG+ S C+LLY + A ERLK IR + DGF +AE DL LRG GEVLG RQ G F++ADLA L A A+ +
Sbjct: 5 LLYPLFQPIDSLKGVGPRIAPLVKKLMGPKVVDALWHLPTGIIDRRNRPKVTEAMPGTVATLVL---TVDEHRPAPPGSRAPYRVAASDETGTLTL-------VFFRAKRDYLERLLPVGEQRVVSGRI--EVYNDLPQMAHPDHVVPVSDLASIQTVEPVHPLTQGLTPKILGKVVGAALDFGLTVARTAPEWLDPTVVAREGWPSWGEALQAAHHPADHAALEPLSPARARLAYDELLASQLALILVRASLR--------------ERAGRSLTGDGGLRDTALAALPFALTGAQRRAVDEIAADMA-----RPARMMRLLQGDVGSGKTVVAWLAMLVALEAGAQAALMAPTEILARQHLETIAPLAEAV-------GVRIALLTGRDKGKAREDLVAAVAAGDVRVLIGTHA-LFQADVAFHDLGLVVIDEQHRFGVDQRLGLSSKGRATDVLVMTATPIPRTLTLTHYGDMDISRLDEKPPGRQPVDTRVLPQDRLPQVIEAIQRAIATGNKVYWVCPLVEELETSD---LAAAESRYEDLRGVLGG-RVGLVHGRMTAAEKDAVMERFTR----EGVDVLVATTVIEVGVNVPAATVMVIEHAERFGLAQLHQLRGRIGRG----TGQ------------------STCLLLYQGPLGEVARERLKVIRDSEDGFFIAEEDLRLRGGGEVLGTRQSGLPA--FRLADLATHTDLLAMARDDAKLIA 665
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Match: A0A2E8XN49_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XN49_9PROT) HSP 1 Score: 470 bits (1210), Expect = 8.260e-143 Identity = 303/730 (41.51%), Postives = 419/730 (57.40%), Query Frame = 2
Query: 665 LAFLSSPPEKALKGVGPKRAEQLAKLGIHSVANLLWHLPTGMVDRRHVSRVADLVEGEIATVLLKVATVSNNSVQKPGPHVRVSKMNRVGCVDLDGDKMDVVIFGGPWWKVKGEFEVGETKVVSGRVTADKFSGNLVMSSPDVVAPLADLDKVMFVQPTYPLTAGLALPSLRSAIALALDKLEEVPFPPEWINPEVMRENGWPSLREALVAAHRPQEQDDLGLSGPTRSRLAYDELLASQLTLALRRRQNRGAERTMHESDGEAGERGEMSASGGAALVDEGRGRLPFNLTSSQNKTLDEILTDMGGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLKAAGQGAQSCMLAPTEVLTVQHLQTLRSMAGGIERPDGQGNLRVELLTGNVKGKARQVLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDRLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIETTLIPVGKAKDIVKRLKDRVGTDDKVFWVLPQINKSESSSRQHLASATERYEALVEELGGDRVSLLHGKMTSAEKNKRLSEFSEAEKGEGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKTGKTATATPSPEEMPQEKRQSSHCILLYGPDISGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYIEGKFKVADLARQGSLADDANKRARHLVE 2848
+ F P ALKGVG + L +L + +LLW LP G++DRR+ ++DL G +AT+ L VA P P R+ C D G+ + +V F G + GE +++SG T++ + G L M+ PD++A A+ D VM VQP YPLT GL+ L AIA AL++L P PEW++P + E WP ++A++AAH P E +DL +R RLAYDELLASQL + L R R SDG L ++ G LPF LT SQ +D+I++D+G S RM RLLQGDVGSGKT VA +AML A G Q+ ++APTE+L QH T+ +A N+ LLTG KGKAR +L+ + G V ++V THA L AF DL +AVVDE+ RFGV QR L G A VL ++ATPIPR+L LA YGD++ SQ+RE P G ++T+ V + +D + ++ ++ KVFWV P + +SE+ + +A+AT+R+ AL + G D+V L+HG+M+ +K+ +S F+ +E+ L +LV+T++IEVGVDVP A V +VE+AE FGL+QLHQLRGR+GR +R T C+LLYG I A ERL +R T DGF +AE+DL LRG G+VLG RQ G + F++ DLA G L A AR ++E
Sbjct: 9 ILFPLFAPVTALKGVGSRIGAHLERLAGAQIVDLLWQLPGGIIDRRYSPVLSDLEPGRVATLELTVAK------HHPPPVANRRIPYRIDCFDGTGE-ITLVFFHGRSDYLTSVLPEGEVRLISG--TSELYDGKLQMTHPDIIAKPAERDTVMRVQPVYPLTEGLSQNVLGKAIAGALERL---PALPEWLDPALAGERAWPDWKDAVLAAHTPNEAEDLEPVSASRMRLAYDELLASQLAIMLIRSHVRRQPGLPVASDGH--------------LREQVLGALPFALTGSQRTAIDDIVSDLG-----SDHRMLRLLQGDVGSGKTVVALMAMLTAVEAGRQAALMAPTEILAQQHYATIAPLAEA-------ANVPCVLLTGRDKGKARDAILEKLADGTVPLVVGTHA-LFQGDIAFHDLAVAVVDEQHRFGVHQRLLLADKGSAVDVLLMTATPIPRTLMLAAYGDLDESQLREKPAGRKPVKTSTASVDRLEDAISGVRRQLDAGGKVFWVCPLVEESET---EDVAAATQRHSALQDRFG-DKVGLVHGRMSGKQKDAVMSRFAGSEEP-SLDILVATTVIEVGVDVPDATVMIVEHAERFGLAQLHQLRGRIGRGERDAT----------------------CLLLYGHGIGKTARERLTVLRDTDDGFEIAEQDLRLRGAGDVLGTRQSGLPD--FRLVDLAAHGELLAVARDDARLIIE 670 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1273.1 >prot_C-linearis_contig11.1273.1 ID=prot_C-linearis_contig11.1273.1|Name=mRNA_C-linearis_contig11.1273.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1561bp MWTVGRALHIVALLALLPRCCCALGGTCQSVGGRAERGGRVVALQRLVSNback to top mRNA from alignment at C-linearis_contig11:2123269..2137898+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1273.1 ID=mRNA_C-linearis_contig11.1273.1|Name=mRNA_C-linearis_contig11.1273.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=14630bp|location=Sequence derived from alignment at C-linearis_contig11:2123269..2137898+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:2123269..2137898+ >mRNA_C-linearis_contig11.1273.1 ID=mRNA_C-linearis_contig11.1273.1|Name=mRNA_C-linearis_contig11.1273.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=9366bp|location=Sequence derived from alignment at C-linearis_contig11:2123269..2137898+ (Chordaria linearis ClinC8C monoicous)back to top |