prot_C-linearis_contig11.1235.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1235.1
Unique Nameprot_C-linearis_contig11.1235.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length166
Homology
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: D7FPM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM0_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 1.490e-106
Identity = 157/165 (95.15%), Postives = 162/165 (98.18%), Query Frame = 0
Query:    1 MGPPPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 165
            MGPPPP GEAQYV+LRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVK+IKHDGNVTLDQVI+IAR MR RSMARTLAGTVKEMLGTCNSVGCTVNGQSPR+IQSGI+EGEIVIPDE
Sbjct:    1 MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 165          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A835YTI9_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI9_9STRA)

HSP 1 Score: 283 bits (724), Expect = 7.250e-96
Identity = 142/165 (86.06%), Postives = 155/165 (93.94%), Query Frame = 0
Query:    1 MGPPPPAG-EAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPD 164
            MGPPPPA  E +YVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQK+T +WKGLPITVKLTI+NRQATVSVIP+ASSLILKALNEPERDRKKVKH+KHDGNVTLDQ+ID+AR MRARSMARTLAGTVKE+LGT  SVGCTVNG +PR++Q  IT+GEIVIPD
Sbjct:    1 MGPPPPASAEEKYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKSTMDWKGLPITVKLTIVNRQATVSVIPSASSLILKALNEPERDRKKVKHVKHDGNVTLDQIIDVARVMRARSMARTLAGTVKEVLGTAFSVGCTVNGMAPRDVQKAITDGEIVIPD 165          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S2UAZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAZ7_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.490e-83
Identity = 116/162 (71.60%), Postives = 148/162 (91.36%), Query Frame = 0
Query:    4 PPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 165
            PPP+ + Q V++R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKG+ +TVKLT++NRQATV++IPAASSLI+KALNEP RDRKKVK++ H+GN+TL+QVIDIA+ MR RSMAR L+GTVKE+LGTCNS+GCTVNG+SPR+IQ+GI +GE+VIPDE
Sbjct:    3 PPPSNDVQIVIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGMNVTVKLTVVNRQATVTMIPAASSLIMKALNEPVRDRKKVKNVVHNGNITLEQVIDIAKVMRERSMARKLSGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEVVIPDE 164          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7R9U1B9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B9_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.550e-83
Identity = 119/165 (72.12%), Postives = 145/165 (87.88%), Query Frame = 0
Query:    1 MGPPPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 165
            MGPPPPAGE + V++RAIGGEVG+ A+LAPKLGPLGLSPKK+GEDI+  T +WKGL +TVKL ++NRQATVSVIP++SSL++KALNEP RDRKKVKH+ HDGN+TLDQVID+AR MR RSMART+ GTVKE+LGTC S+GCTVNG+ P+ +Q  IT+GE+ I DE
Sbjct:   22 MGPPPPAGEEKVVIMRAIGGEVGSAASLAPKLGPLGLSPKKVGEDIKAATMDWKGLAVTVKLVVVNRQATVSVIPSSSSLVMKALNEPPRDRKKVKHVVHDGNITLDQVIDVARIMRERSMARTMGGTVKEILGTCVSIGCTVNGEHPKTLQQQITDGELEIADE 186          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S1XKH5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKH5_9STRA)

HSP 1 Score: 248 bits (634), Expect = 9.290e-82
Identity = 118/161 (73.29%), Postives = 144/161 (89.44%), Query Frame = 0
Query:    5 PPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 165
            PPAGE + VV+RAIGGEVG+ A+LAPKLGPLGLSPKK+GEDI+K T +WKGL +TVKL ++NRQATVSVIP+ASSL++KALNEP RDRKKVKH+ HDGN+TLDQVID+AR MR RSMAR L+GTVKE+LGTC S+GC+VNG++PR +Q  IT+GE+ IP+E
Sbjct:   33 PPAGEEKIVVMRAIGGEVGSAASLAPKLGPLGLSPKKVGEDIKKATMDWKGLSVTVKLVVVNRQATVSVIPSASSLVMKALNEPVRDRKKVKHVVHDGNITLDQVIDVARVMRERSMARELSGTVKEILGTCVSIGCSVNGENPRTLQQQITDGELEIPEE 193          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: B8BTS3_THAPS (RL12, ribosomal protein 11 60S large ribosomal subunit n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8BTS3_THAPS)

HSP 1 Score: 243 bits (620), Expect = 4.750e-80
Identity = 113/161 (70.19%), Postives = 145/161 (90.06%), Query Frame = 0
Query:    5 PPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 165
            PP+ + + V++R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKKVK++ H+GN+TLDQVIDIAR MR RSMA+ LAGTVKE+LGT NS+GCTVNG+SPR+IQ+GI +GE+ IP+E
Sbjct:    4 PPSDDVKIVIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKVKNVVHNGNITLDQVIDIARQMRERSMAKKLAGTVKEILGTANSIGCTVNGESPRDIQAGIDDGEVEIPEE 164          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S3PV60_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV60_9STRA)

HSP 1 Score: 243 bits (619), Expect = 6.750e-80
Identity = 114/162 (70.37%), Postives = 144/162 (88.89%), Query Frame = 0
Query:    4 PPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 165
            PPP+ E + V++R +GGEV   ++LAPK+GPLGLSPKK+GEDIQK T++WKGL +TVKLT++NRQATV++IP++SSLI+KALNEP RDRKKVK++ HDGN+TLDQVI+IARAMR RS A+ L+GTVKEMLGTCNS+GCTVNG SPR++Q+GI +GEI IP E
Sbjct:    3 PPPSDEVKIVIMRTVGGEVAAASSLAPKIGPLGLSPKKVGEDIQKATKDWKGLSVTVKLTVVNRQATVTMIPSSSSLIMKALNEPVRDRKKVKNVTHDGNLTLDQVIEIARAMRDRSCAKELSGTVKEMLGTCNSIGCTVNGDSPRDVQAGIDDGEIEIPAE 164          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S1E7R7_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7R7_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.590e-79
Identity = 110/161 (68.32%), Postives = 144/161 (89.44%), Query Frame = 0
Query:    4 PPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPD 164
            PPP+ + + V++R +GGE+G+ ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKKVK++KHDGN+ LDQ+I+IAR MR RSMA+ LAGTVKE+LGTCNS+GCTVNG+SPR++Q  I +GE+ IP+
Sbjct:   18 PPPSDDVKIVIMRTVGGEIGSASSLAPKIGPLGLSPKKVGEDIQKATLDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKVKNVKHDGNIALDQIIEIARQMRERSMAKKLAGTVKEILGTCNSIGCTVNGESPRDLQQMIDDGEVEIPE 178          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A485K9J9_9STRA (Aste57867_1008 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485K9J9_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.150e-78
Identity = 119/164 (72.56%), Postives = 141/164 (85.98%), Query Frame = 0
Query:    1 MGPPPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPD 164
            M PPPPAGE + VVLR  GGE+   +ALAPK+GPLGLSPKK+GEDI K TQ+WKGL +TVKLTI+NR ATVS+IP+ASSL++KAL EP RDRKKVK+IKHDGN+TL+ VIDIAR MR+RSMAR L+GTVKEMLGT NS+GCTVNG++P EIQ  I EGE+ IP+
Sbjct:    1 MAPPPPAGEEKIVVLRTTGGEIAPASALAPKVGPLGLSPKKVGEDICKATQDWKGLSVTVKLTIVNRVATVSLIPSASSLLVKALKEPPRDRKKVKNIKHDGNLTLETVIDIARTMRSRSMARHLSGTVKEMLGTANSLGCTVNGEAPTEIQRRIDEGELDIPE 164          
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S1BV82_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BV82_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.580e-78
Identity = 112/162 (69.14%), Postives = 143/162 (88.27%), Query Frame = 0
Query:    4 PPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 165
            PPP+ + + V++R +GGEVG  ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKK K+I H+GN+TLDQVIDIAR MR RSMA+ L+GTVKE+LGT NS+GCTVNG++PR++QS I +GE+ IPDE
Sbjct:    3 PPPSDDVKIVIMRTVGGEVGAASSLAPKIGPLGLSPKKVGEDIQKATLDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKEKNIVHNGNITLDQVIDIARQMRERSMAKELSGTVKEILGTANSIGCTVNGENPRDVQSAIDDGEVEIPDE 164          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPM0_ECTSI1.490e-10695.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTI9_9STRA7.250e-9686.06Ribosomal protein L11 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2UAZ7_9STRA1.490e-8371.60Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7R9U1B9_9STRA1.550e-8372.12Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XKH5_9STRA9.290e-8273.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B8BTS3_THAPS4.750e-8070.19RL12, ribosomal protein 11 60S large ribosomal sub... [more]
A0A7S3PV60_9STRA6.750e-8070.37Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1E7R7_9STRA1.590e-7968.32Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A485K9J9_9STRA1.150e-7872.56Aste57867_1008 protein n=8 Tax=Saprolegniaceae Tax... [more]
A0A7S1BV82_9STRA1.580e-7869.14Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 13..144
e-value: 6.7E-47
score: 171.8
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 8..164
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 9..145
score: 14.945
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 81..163
e-value: 1.2E-37
score: 130.2
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 75..148
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 74..143
e-value: 7.6E-17
score: 61.6
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 2..80
e-value: 3.9E-32
score: 112.3
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 7..86
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 9..69
e-value: 1.4E-19
score: 69.7
NoneNo IPR availablePANTHERPTHR11661:SF2RIBOSOMAL PROTEIN L12coord: 8..164
IPR020785Ribosomal protein L11, conserved sitePROSITEPS00359RIBOSOMAL_L11coord: 130..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1443797..1446908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1235.1mRNA_C-linearis_contig11.1235.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 1443797..1447661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1235.1 ID=prot_C-linearis_contig11.1235.1|Name=mRNA_C-linearis_contig11.1235.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=166bp
MGPPPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNT
QEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKH
DGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPRE
IQSGITEGEIVIPDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR036769Ribosomal_L11_C_sf
IPR020783Ribosomal_L11_C
IPR036796Ribosomal_L11/L12_N_sf
IPR020784Ribosomal_L11_N
IPR020785Ribosomal_L11_CS