mRNA_C-linearis_contig11.1235.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1235.1
Unique NamemRNA_C-linearis_contig11.1235.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: D7FPM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM0_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 2.270e-102
Identity = 157/165 (95.15%), Postives = 162/165 (98.18%), Query Frame = 1 
Query:    1 MGPPPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 495
            MGPPPP GEAQYV+LRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVK+IKHDGNVTLDQVI+IAR MR RSMARTLAGTVKEMLGTCNSVGCTVNGQSPR+IQSGI+EGEIVIPDE
Sbjct:    1 MGPPPPTGEAQYVILRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 165
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BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A835YTI9_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI9_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.300e-91
Identity = 142/165 (86.06%), Postives = 155/165 (93.94%), Query Frame = 1 
Query:    1 MGPPPPAG-EAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPD 492
            MGPPPPA  E +YVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQK+T +WKGLPITVKLTI+NRQATVSVIP+ASSLILKALNEPERDRKKVKH+KHDGNVTLDQ+ID+AR MRARSMARTLAGTVKE+LGT  SVGCTVNG +PR++Q  IT+GEIVIPD
Sbjct:    1 MGPPPPASAEEKYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKSTMDWKGLPITVKLTIVNRQATVSVIPSASSLILKALNEPERDRKKVKHVKHDGNVTLDQIIDVARVMRARSMARTLAGTVKEVLGTAFSVGCTVNGMAPRDVQKAITDGEIVIPD 165
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BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S2UAZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAZ7_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.440e-79
Identity = 116/162 (71.60%), Postives = 148/162 (91.36%), Query Frame = 1 
Query:   10 PPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 495
            PPP+ + Q V++R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKG+ +TVKLT++NRQATV++IPAASSLI+KALNEP RDRKKVK++ H+GN+TL+QVIDIA+ MR RSMAR L+GTVKE+LGTCNS+GCTVNG+SPR+IQ+GI +GE+VIPDE
Sbjct:    3 PPPSNDVQIVIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGMNVTVKLTVVNRQATVTMIPAASSLIMKALNEPVRDRKKVKNVVHNGNITLEQVIDIAKVMRERSMARKLSGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEVVIPDE 164
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BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7R9U1B9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B9_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.520e-79
Identity = 119/165 (72.12%), Postives = 145/165 (87.88%), Query Frame = 1 
Query:    1 MGPPPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 495
            MGPPPPAGE + V++RAIGGEVG+ A+LAPKLGPLGLSPKK+GEDI+  T +WKGL +TVKL ++NRQATVSVIP++SSL++KALNEP RDRKKVKH+ HDGN+TLDQVID+AR MR RSMART+ GTVKE+LGTC S+GCTVNG+ P+ +Q  IT+GE+ I DE
Sbjct:   22 MGPPPPAGEEKVVIMRAIGGEVGSAASLAPKLGPLGLSPKKVGEDIKAATMDWKGLAVTVKLVVVNRQATVSVIPSSSSLVMKALNEPPRDRKKVKHVVHDGNITLDQVIDVARIMRERSMARTMGGTVKEILGTCVSIGCTVNGEHPKTLQQQITDGELEIADE 186
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BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S1XKH5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKH5_9STRA)

HSP 1 Score: 248 bits (633), Expect = 8.700e-78
Identity = 118/161 (73.29%), Postives = 144/161 (89.44%), Query Frame = 1 
Query:   13 PPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 495
            PPAGE + VV+RAIGGEVG+ A+LAPKLGPLGLSPKK+GEDI+K T +WKGL +TVKL ++NRQATVSVIP+ASSL++KALNEP RDRKKVKH+ HDGN+TLDQVID+AR MR RSMAR L+GTVKE+LGTC S+GC+VNG++PR +Q  IT+GE+ IP+E
Sbjct:   33 PPAGEEKIVVMRAIGGEVGSAASLAPKLGPLGLSPKKVGEDIKKATMDWKGLSVTVKLVVVNRQATVSVIPSASSLVMKALNEPVRDRKKVKHVVHDGNITLDQVIDVARVMRERSMARELSGTVKEILGTCVSIGCSVNGENPRTLQQQITDGELEIPEE 193
[Close]
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: B8BTS3_THAPS (RL12, ribosomal protein 11 60S large ribosomal subunit n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8BTS3_THAPS)

HSP 1 Score: 243 bits (619), Expect = 4.210e-76
Identity = 113/161 (70.19%), Postives = 145/161 (90.06%), Query Frame = 1 
Query:   13 PPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 495
            PP+ + + V++R +GGEVG+ ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKKVK++ H+GN+TLDQVIDIAR MR RSMA+ LAGTVKE+LGT NS+GCTVNG+SPR+IQ+GI +GE+ IP+E
Sbjct:    4 PPSDDVKIVIMRTVGGEVGSASSLAPKIGPLGLSPKKVGEDIQKATMDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKVKNVVHNGNITLDQVIDIARQMRERSMAKKLAGTVKEILGTANSIGCTVNGESPRDIQAGIDDGEVEIPEE 164
[Close]
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S3PV60_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV60_9STRA)

HSP 1 Score: 242 bits (618), Expect = 5.960e-76
Identity = 114/162 (70.37%), Postives = 144/162 (88.89%), Query Frame = 1 
Query:   10 PPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 495
            PPP+ E + V++R +GGEV   ++LAPK+GPLGLSPKK+GEDIQK T++WKGL +TVKLT++NRQATV++IP++SSLI+KALNEP RDRKKVK++ HDGN+TLDQVI+IARAMR RS A+ L+GTVKEMLGTCNS+GCTVNG SPR++Q+GI +GEI IP E
Sbjct:    3 PPPSDEVKIVIMRTVGGEVAAASSLAPKIGPLGLSPKKVGEDIQKATKDWKGLSVTVKLTVVNRQATVTMIPSSSSLIMKALNEPVRDRKKVKNVTHDGNLTLDQVIEIARAMRDRSCAKELSGTVKEMLGTCNSIGCTVNGDSPRDVQAGIDDGEIEIPAE 164
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BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S1E7R7_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7R7_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.970e-75
Identity = 110/161 (68.32%), Postives = 144/161 (89.44%), Query Frame = 1 
Query:   10 PPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPD 492
            PPP+ + + V++R +GGE+G+ ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKKVK++KHDGN+ LDQ+I+IAR MR RSMA+ LAGTVKE+LGTCNS+GCTVNG+SPR++Q  I +GE+ IP+
Sbjct:   18 PPPSDDVKIVIMRTVGGEIGSASSLAPKIGPLGLSPKKVGEDIQKATLDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKVKNVKHDGNIALDQIIEIARQMRERSMAKKLAGTVKEILGTCNSIGCTVNGESPRDLQQMIDDGEVEIPE 178
[Close]
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A7S1BV82_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BV82_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.350e-74
Identity = 112/162 (69.14%), Postives = 143/162 (88.27%), Query Frame = 1 
Query:   10 PPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPDE 495
            PPP+ + + V++R +GGEVG  ++LAPK+GPLGLSPKK+GEDIQK T +WKGL +TVKLT++NRQATVS+IP+ASSL++KALNEP RDRKK K+I H+GN+TLDQVIDIAR MR RSMA+ L+GTVKE+LGT NS+GCTVNG++PR++QS I +GE+ IPDE
Sbjct:    3 PPPSDDVKIVIMRTVGGEVGAASSLAPKIGPLGLSPKKVGEDIQKATLDWKGLNVTVKLTVVNRQATVSMIPSASSLVMKALNEPVRDRKKEKNIVHNGNITLDQVIDIARQMRERSMAKELSGTVKEILGTANSIGCTVNGENPRDVQSAIDDGEVEIPDE 164
[Close]
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Match: A0A485K9J9_9STRA (Aste57867_1008 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485K9J9_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.400e-74
Identity = 119/164 (72.56%), Postives = 141/164 (85.98%), Query Frame = 1 
Query:    1 MGPPPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNTQEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKHDGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPREIQSGITEGEIVIPD 492
            M PPPPAGE + VVLR  GGE+   +ALAPK+GPLGLSPKK+GEDI K TQ+WKGL +TVKLTI+NR ATVS+IP+ASSL++KAL EP RDRKKVK+IKHDGN+TL+ VIDIAR MR+RSMAR L+GTVKEMLGT NS+GCTVNG++P EIQ  I EGE+ IP+
Sbjct:    1 MAPPPPAGEEKIVVLRTTGGEIAPASALAPKVGPLGLSPKKVGEDICKATQDWKGLSVTVKLTIVNRVATVSLIPSASSLLVKALKEPPRDRKKVKNIKHDGNLTLETVIDIARTMRSRSMARHLSGTVKEMLGTANSLGCTVNGEAPTEIQRRIDEGELDIPE 164
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPM0_ECTSI2.270e-10295.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTI9_9STRA1.300e-9186.06Ribosomal protein L11 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2UAZ7_9STRA1.440e-7971.60Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7R9U1B9_9STRA1.520e-7972.12Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XKH5_9STRA8.700e-7873.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B8BTS3_THAPS4.210e-7670.19RL12, ribosomal protein 11 60S large ribosomal sub... [more]
A0A7S3PV60_9STRA5.960e-7670.37Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1E7R7_9STRA1.970e-7568.32Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S1BV82_9STRA1.350e-7469.14Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A485K9J9_9STRA1.400e-7472.56Aste57867_1008 protein n=8 Tax=Saprolegniaceae Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1443797..1447661 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score312.4
Seed ortholog evalue1.3e-82
Seed eggNOG ortholog2880.D7FPM0
Preferred namerpl12
KEGG koko:K02870
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000381,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0015934,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031323,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048024,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904
EggNOG free text desc.ribosomal large subunit assembly
EggNOG OGsCOG0080@1,KOG0886@2759
Ec32 ortholog description60S ribosomal protein L12
Ec32 orthologEc-16_001460.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons5
Model size1251
Cds size498
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1235.1prot_C-linearis_contig11.1235.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 1443797..1446908 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927443.5078928-CDS-C-linearis_contig11:1443796..14438181622927443.5078928-CDS-C-linearis_contig11:1443796..1443818Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1443797..1443818 +
1690879703.4284198-CDS-C-linearis_contig11:1443796..14438181690879703.4284198-CDS-C-linearis_contig11:1443796..1443818Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1443797..1443818 +
1622927443.5206811-CDS-C-linearis_contig11:1444467..14446491622927443.5206811-CDS-C-linearis_contig11:1444467..1444649Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1444468..1444649 +
1690879703.4419165-CDS-C-linearis_contig11:1444467..14446491690879703.4419165-CDS-C-linearis_contig11:1444467..1444649Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1444468..1444649 +
1622927443.5303307-CDS-C-linearis_contig11:1445374..14454521622927443.5303307-CDS-C-linearis_contig11:1445374..1445452Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1445375..1445452 +
1690879703.45186-CDS-C-linearis_contig11:1445374..14454521690879703.45186-CDS-C-linearis_contig11:1445374..1445452Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1445375..1445452 +
1622927443.539763-CDS-C-linearis_contig11:1446291..14464651622927443.539763-CDS-C-linearis_contig11:1446291..1446465Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1446292..1446465 +
1690879703.461095-CDS-C-linearis_contig11:1446291..14464651690879703.461095-CDS-C-linearis_contig11:1446291..1446465Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1446292..1446465 +
1622927443.5493748-CDS-C-linearis_contig11:1446866..14469081622927443.5493748-CDS-C-linearis_contig11:1446866..1446908Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1446867..1446908 +
1690879703.4707994-CDS-C-linearis_contig11:1446866..14469081690879703.4707994-CDS-C-linearis_contig11:1446866..1446908Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1446867..1446908 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927443.5585933-UTR-C-linearis_contig11:1446908..14476611622927443.5585933-UTR-C-linearis_contig11:1446908..1447661Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1446909..1447661 +
1690879703.4803483-UTR-C-linearis_contig11:1446908..14476611690879703.4803483-UTR-C-linearis_contig11:1446908..1447661Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1446909..1447661 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1235.1

>prot_C-linearis_contig11.1235.1 ID=prot_C-linearis_contig11.1235.1|Name=mRNA_C-linearis_contig11.1235.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=166bp
MGPPPPAGEAQYVVLRAIGGEVGNTAALAPKLGPLGLSPKKIGEDIQKNT
QEWKGLPITVKLTIINRQATVSVIPAASSLILKALNEPERDRKKVKHIKH
DGNVTLDQVIDIARAMRARSMARTLAGTVKEMLGTCNSVGCTVNGQSPRE
IQSGITEGEIVIPDE*
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mRNA from alignment at C-linearis_contig11:1443797..1447661+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1235.1 ID=mRNA_C-linearis_contig11.1235.1|Name=mRNA_C-linearis_contig11.1235.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3865bp|location=Sequence derived from alignment at C-linearis_contig11:1443797..1447661+ (Chordaria linearis ClinC8C monoicous)
ATGGGCCCCCCCCCGCCGGCTGGTGAGTGTGCCGGGGATCGAGCGTGGTG
TCTATGTGGGGGGCGAAAGTTTGACTGCTTTGATCAAAAGTAGTGGTGTG
GGAGGCATGAGGGCAGCAGCAGTGGTGAGGTTGGGGCTGTTGATGTGCAG
TGCTGCTGAGCGTGAATAAATGCATCCTGCACAGCTATGGGTGGTGTGTC
AATGGTGGGAATCATGTCCCTTGTCTCGAAAATGCGATGCGTTTACGAGG
CACCTCGACCGCTATAGCTGCACCAAACACGCACGTAGTGCGCCAACACG
CGCAGAAACCATTTTTGCAGATTTCCGTGGTGTCCTGTTCATCTGATCGA
ATCCGACTTGTATCGCCGAAAGATTGTGCAGAGAGGCACACCGACTCATA
ACCCTGTACATGTATGTAGTAGATCTCGTTCCCGACGCTCTCTCATTGCT
CACTCTGTCTGGCCTACTGCCGGAGACCCAGGCCACAACATTAAAATTCG
AAATTTGGGTGTGCAAGTGGCAAGCAACACCCCTTCATCATGCCGCCCCT
CAAAAGCTCCCAAAACATCAACGACCATGACGCGACCATCCCCTTATACT
GACCGCGCTGGCCGTTCTTTTTGTTTATTGTCCGCACGCGCGTATCCGGG
CATTTCTGCCCGTCTCCCCAGGTGAGGCACAGTACGTGGTCCTTCGGGCG
ATCGGGGGTGAGGTAGGAAACACGGCCGCTCTGGCCCCCAAGCTGGGTCC
CCTGGGTCTGTCGCCTAAGAAGATCGGCGAGGACATCCAGAAGAACACCC
AGGAGTGGAAGGGGCTCCCGATCACGGTGAAGCTGACCATCATCAACCGT
CAGGTGAGCCTTTGGCGTGCTTCCCGATGCTGCCTGTGGTGTACCTATGA
TACGTAGCGCCGGCACTTGCAATGTTGAGTTGAGAGGTTAGTTTGGTCGG
TTGATGCGTTTTGGAAAAAGGGTAGTGAAGGTCGGTGATCATTGCTTGTG
GTGCGGGTGGCTGCTGCGATTTCCTCTTCGATGGTTTCCACTGGAGAAAA
GCGAGGTCCAGCTTTTTCAGTTACTTTGGTGCCGCAAGTTCGCAAATGTT
GGTGATGGTACTACCTACCGACCACGACGTACGTCTGTCATGTGCGGTGG
ACGAGAACCTAGACCCGGGTGTAGTTTATGCGTGGGGTGGCATGCCGAGA
ATGGGCACAGTCGCAAAGCAGCACGGCCGCCACCGCGCAGTGCTGCTTCC
TTCAGCTCAGATATTGGACCGGCGGCACTTTTGACTAGTCTGCGAAAAGC
AAGAATCAAGAAACAAAAACAATCCGGCAATATCCCAAGTTTTTTCTCGT
CTCGCTCCCTCGACTGGGGCTTGGCCGCACCGGATTGGTTATCGGACCGT
ATGCCATGGTTTAGGTCTGAATGTCGACTGGCCGGTGCCACGCCAAGCGC
AGTCAACACGCAGATGCATCCTCACTTTTCTTCTACTTTCGTTCGCACGC
ATATCTGCTGCTGCTGCTTATGTTGATGCCCCGCATTTCCTTGTGTGTAT
CCCCATGCCGTGTGTCGTCGTCGTCTAGGCTACCGTGTCGGTGATCCCCG
CCGCTTCGTCGCTCATCCTCAAGGCTCTCAACGAGCCCGAGCGCGACCGC
AAGAAGGTAAGTGCGCGCATGCTTGCATGCTGTGCGCCCTCCCTTCCGAG
AAATCGTACCCAGCAGACAGCAGCAGTAACGTGAAACAAATACAATTACA
ATTTCTCCAAAAACATAAACTGCTGTTTTCTGGGCATTCGCCACGTCGCA
AAGACACGAAGTTGACCGAAGATATTCCCAGCCCGCAAGCGACCCCTGAC
GCGCCCAAGTGCTCCCTGCGCGTCTGTGGGGCCGCTGTAATCTTGATTAC
GCGAGGCGAGAAGCAACCCGGGGGGGAACCTAACATTCGTTCGTCTGGCT
CCCCCGGCCGGGCTTGGCCGCATCGGACTGGTTTTCGGACCGTATGTCTG
AATGCGGAATGTACCTGGCCTACATGTTTTCGATAGCAAGTGTTTCGAGG
GTAGTCATGTTTTTCCAAGTGCGGTTGGAGTGCGCCCACCCGTCTTCGTG
GGGGTCGCTTTTTGTGAACCGCGGTGCCCCTGTATGATACGATATCGAAA
CGGTGCGCGCAGGCAGCAAGCGCGTGGCCGCTGTGAACTACCTTCCCCAT
TTTTGCTTTTTTTTTTTCGATTTTTGCGTGGGTATCTCCGGCGCTTTGGC
TTTTTCGGTGTCTGGTACTGCCTGCGCAAGCGAGGTTCGACTCGGCTTCC
TACAGTACGTCTCTAACCCCCGTGCACGATGTTGCTTCGGCTCTTCTTCG
TCGCCTTCCTGTATGAACTACATCTCTCCATTCGCTCCTCCTTGCCCCGC
ACCATACTCATGCTGTCTGTCTCCGCTGCCGCCTCTTTTCCTTCCTGTTG
CTGTCGATCTGGTTCCTTGCGTGTTGTGTGTGGACGCACGCACAGGTCAA
GCACATAAAGCACGACGGCAACGTCACCCTCGACCAGGTCATCGACATCG
CCCGCGCCATGCGCGCGCGCTCGATGGCCCGCACCCTGGCGGGCACCGTC
AAGGAGATGCTCGGCACCTGCAACTCGGTCGGCTGCACCGTTAACGGACA
GTCCCCCCGTGAGATCCAGGTGTGTCCGTCTTCGCTTTCGGGTTGCGTTT
GTTGGGTGTTGTATTTCGAGGTAGTCTGCAAGGCAGACGACCGCAGTGAG
AGGACCTAGCTCGAATGGTGGGTCGATTCAAGTGTCTTTCCGTGGCTTGC
TCTCTCCCGGGGCGAGCAAACTTGATTTCCGCACGCGTCGTTTCTTGTCT
CGAAGCAAACTTTTCATCCCTAGCTCTGTTCTCACCCCTGTGCCTCTACC
TCTCCGTCCCTCTCGCCTCGAACCCCGCTCTCTCCCATACTTTGCATGTT
TTTTCACGTGGCTGCCATGGTCCCTGTTTGCTGCCGCACCGGCTCCCTGG
ACTGGACGTACATCTACCGTGTTTCGGGACTGCTTTTATCTTTCGCTGTT
GTCGTTGGGGTGGGTCGCAGAGCGGCATCACCGAGGGAGAGATCGTCATC
CCGGACGAGTAGAGTAAAACTCCGTTGCCCCTTGGCTCTGTTTTTTGTGT
TTTGGTAGGATCGATTGAGTGATGGAGGTAGAAGCGTCGTATCTTGCCGG
TAGACCACCTTGCTGGGGAGAGATCAAGGGCTAAACTGAAAAAAAGAAGA
AAAAAAAAGGGGCCTTCGTGCGGCAGATATGATACCCTGGATCTGTGGAG
CAGCCGGCACGTCAAACTATCCCAGCGGATGACCCGGGTCCTTCGGCCCA
GACACTTGACACCGGCGTCCATCTGGTTGTTGGGGCGTGGTATTTCCACA
GCCGAGTCCAGTGCGCCTCTTTGCCCCGCCTCTCGTATGCTGCCACGACT
GAAACGTGCGGTAGTAAGGGTTGGAGAGTCAGCCCTCCCGGCACCGCTCC
GCTGTCTTGTCATATGGTCAGAGCCTCGAATGCAACGAACAACGAACGAG
GCAGCCCACAACAAAGCTGCCAGCAACTTGTCGCTTTCTTCTCATTTACT
TCTCCCTGTCTTGCGACCGGGGCTGGTTGTTTTCTACCGCTCTACTTGGT
TGCACGGCATGAACATACTTGTACTTCGTCTGTGACTAAATGCTAGATAG
CTCGGGGCATTGATCAATTGCCTCACAGCTGGAGATACATACATGGTTGT
GGTTCCTCGAGATGAAAAGAAATGATGAGCTTAGATGTCCACATCGTCGC
GGGCAAGCCTGGGCTCCTTTCCTGGCGCGAGTCCCAAGCAATCTTACTGT
TGGAGCCACGATCCG
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Coding sequence (CDS) from alignment at C-linearis_contig11:1443797..1447661+

>mRNA_C-linearis_contig11.1235.1 ID=mRNA_C-linearis_contig11.1235.1|Name=mRNA_C-linearis_contig11.1235.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at C-linearis_contig11:1443797..1447661+ (Chordaria linearis ClinC8C monoicous)
ATGGGCCCCCCCCCGCCGGCTGATGGGCCCCCCCCCGCCGGCTGGTGAGG
CACAGTACGTGGTCCTTCGGGCGATCGGGGGTGAGGTAGGAAACACGGCC
GCTCTGGCCCCCAAGCTGGGTCCCCTGGGTCTGTCGCCTAAGAAGATCGG
CGAGGACATCCAGAAGAACACCCAGGAGTGGAAGGGGCTCCCGATCACGG
TGAAGCTGACCATCATCAACCGTCAGGTGAGGCACAGTACGTGGTCCTTC
GGGCGATCGGGGGTGAGGTAGGAAACACGGCCGCTCTGGCCCCCAAGCTG
GGTCCCCTGGGTCTGTCGCCTAAGAAGATCGGCGAGGACATCCAGAAGAA
CACCCAGGAGTGGAAGGGGCTCCCGATCACGGTGAAGCTGACCATCATCA
ACCGTCAGGCTACCGTGTCGGTGATCCCCGCCGCTTCGTCGCTCATCCTC
AAGGCTCTCAACGAGCCCGAGCGCGACCGCAAGAAGGCTACCGTGTCGGT
GATCCCCGCCGCTTCGTCGCTCATCCTCAAGGCTCTCAACGAGCCCGAGC
GCGACCGCAAGAAGGTCAAGCACATAAAGCACGACGGCAACGTCACCCTC
GACCAGGTCATCGACATCGCCCGCGCCATGCGCGCGCGCTCGATGGCCCG
CACCCTGGCGGGCACCGTCAAGGAGATGCTCGGCACCTGCAACTCGGTCG
GCTGCACCGTTAACGGACAGTCCCCCCGTGAGATCCAGGTCAAGCACATA
AAGCACGACGGCAACGTCACCCTCGACCAGGTCATCGACATCGCCCGCGC
CATGCGCGCGCGCTCGATGGCCCGCACCCTGGCGGGCACCGTCAAGGAGA
TGCTCGGCACCTGCAACTCGGTCGGCTGCACCGTTAACGGACAGTCCCCC
CGTGAGATCCAGAGCGGCATCACCGAGGGAGAGATCGTCATCCCGGACGA
GTAGAGCGGCATCACCGAGGGAGAGATCGTCATCCCGGACGAGTAG
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