prot_C-linearis_contig11.1226.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig11.1226.1
Unique Name	prot_C-linearis_contig11.1226.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	388

Homology

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BLAST of mRNA_C-linearis_contig11.1226.1 vs. uniprot
Match: A0A6H5KUF2_9PHAE (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF2_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 1.810e-96
Identity = 155/249 (62.25%), Postives = 183/249 (73.49%), Query Frame = 0

Query:   47 QQRQPFVSGIVDMAREVLRSVTCLLEQRDVVLLGATCRSLLEMERRFATGQEAFPLRLTVDEQRGNEDKAVHVDTKTGILKKTPRPGMGTIMANERVDKMTCYWEVKIEAFTGVRLEIGVATRRSIYRGGCNKDECWVFDCYGRACHRARVRGYGCKLKAGDVLGVLLNTADNSLSFFAQGVCMGTAFRNVRPPAPGLGLYPLIVLPSVAHETVRLTGCA-GRGGASSFSFPAPVGPLLATKRTWRARP 294
            ++R+PF  G+VDMA E LRSV CLLEQRD+V+LG TCRSL +++  F +G+EAFPL  TVDE+ GNED AV VDT+TG L+KTPRPGMGTIMA ERVDKMTCYWEVKI+ FTGVRLE+GVATRRSIYRGGC+KDECWV DCYGRACH  R+RGYGCKLKAGDVLGVLLNTAD+SLSFF +G+ +     +         LY L++L      T   T C  GR G S      P  PL   +  + +RP
Sbjct:   44 ERREPFAMGLVDMAGEFLRSVICLLEQRDMVILGGTCRSLRQIQGGFVSGEEAFPLLPTVDERHGNEDNAVEVDTETGALRKTPRPGMGTIMAKERVDKMTCYWEVKIQVFTGVRLEVGVATRRSIYRGGCDKDECWVIDCYGRACHGTRLRGYGCKLKAGDVLGVLLNTADDSLSFFVKGMHLTMVCSDD-------DLYTLVLL------TSSTTSCMLGREGLSR----TPHAPLPRCRSAFVSRP 275

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BLAST of mRNA_C-linearis_contig11.1226.1 vs. uniprot
Match: D8LU41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU41_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 2.020e-67
Identity = 103/135 (76.30%), Postives = 121/135 (89.63%), Query Frame = 0

Query:   47 QQRQPFVSGIVDMAREVLRSVTCLLEQRDVVLLGATCRSLLEMERRFATGQEAFPLRLTVDEQRGNEDKAVHVDTKTGILKKTPRPGMGTIMANERVDKMTCYWEVKIEAFTGVRLEIGVATRRSIYRGGCNKDE 181
            ++R+PF  G+VDMA EVLRSVTCLLEQ D+V+LG TCRSL +++R FA+G+EAFPLR TVDE+ GNED AV VDT+TG+L+KTPRPGMGTIMA ERVDKMTCYWEV I+ FTGVRLE+GVATRRSIYRGGC+KDE
Sbjct:   43 ERREPFAMGLVDMAGEVLRSVTCLLEQHDMVILGGTCRSLRQIQRGFASGEEAFPLRPTVDERHGNEDNAVQVDTETGVLRKTPRPGMGTIMAKERVDKMTCYWEVNIQVFTGVRLEVGVATRRSIYRGGCDKDE 177

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BLAST of mRNA_C-linearis_contig11.1226.1 vs. uniprot
Match: A0A835YJW0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.260e-53
Identity = 127/363 (34.99%), Postives = 176/363 (48.48%), Query Frame = 0

Query:   56 IVDMAREVLRSVTCLLEQRDVVLLGATCRSLLEMERRFATGQEAFPLRLTVDEQRGNEDKAVHVDTKTGILKKTPRPGMGTIMANERVDKMTCYWEVKIEAFTGVRLEIGVATRRSIYRGGC----------NKDECWVFDCYGRACHRARVRGYGCKLKAGDVLGVLLNTADNSLSFFAQGVCMGTAFRNVRPPAPGL-------GLYPLIVLPSVAHETVRLTGCAGRGGASSFSFPAPVGPLLATKRTWRARPHP---NDFDLIVETYDAQVIHRLP--------------GLDPARTTVGGLKEALVKCNEMELFT--PGQLALRTQGALLTDDSVLLSATGVSFGSRGSQLQDIFLYV 382
            + ++ +EVLRS+  +L  RD   L    +S   +   +        +R+ V       D+        G L +  RPG G I   +RVD ++CYWEV+++ FTG+RLEIGV +  ++  GG           ++   W FDC GRA H A  + YG  L AG V+GVL N    +L+FF  GVCMG A   VR  A          GLYP++++PSV  E V +     RG     + P  +  LLAT+  WR    P   +   LIVET+ A V +R+P                     TV  LK+ L +   ++ F   P  L L + GALL DDS  L   G+ FG  G+QLQD+FLYV
Sbjct:    1 MAELPQEVLRSILAMLSLRDAGSLLLASKSTQTLLDDYCMPHRPS-MRIRVSSGLLKTDR--------GKLSRASRPGSGVITGRDRVDGLSCYWEVELQHFTGLRLEIGVCSAAAVPDGGLGGSSGDSGCVDRAHTWTFDCAGRARHGAVTKAYGASLPAGAVVGVLFNARAATLTFFCDGVCMGVAHHQVRAAAXXXXXXXXXXGLYPIVIIPSVTGERVAVRAPRSRG-----ALPGHIPSLLATRHAWRPPTPPIPGSPRCLIVETFSAAVNYRVPLPGCTVGGSXXXXXXXXXXXATVRDLKQLLAQDEHLKAFAIEPSCLQLSSGGALLCDDSKTLDEVGIRFGENGAQLQDVFLYV 349

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BLAST of mRNA_C-linearis_contig11.1226.1 vs. uniprot
Match: A0A3B9UWP9_CLOSP (B30.2/SPRY domain-containing protein n=1 Tax=Clostridium sp. TaxID=1506 RepID=A0A3B9UWP9_CLOSP)

HSP 1 Score: 56.2 bits (134), Expect = 2.280e-5
Identity = 40/136 (29.41%), Postives = 65/136 (47.79%), Query Frame = 0

Query:  149 YWEVKIE--AFTGVRLEIGVATRRSIYRGGCNKDECWVFDCY-GRACHRARVRGYGCKLKAGDVLGVLLNTADNSLSFFAQGVCMGTAFRNVRPPAPGLGLYPLIVLPSVAHETVRLTGCAGRGGASSFSFPAPVG 281
            YWEV  +  ++  V +  G    +S Y G  +    W + C  GR  + +  + YG +++  DVLGVLL+  + +LSF   G+ +G AF  +    P   L+P I   S  + T+         G++ F +P P G
Sbjct:   46 YWEVTCDNTSYAMVGVSTGEFNVQSRYAGSTSTS--WAYYCETGRVYNNSVNKVYGSQIRNNDVLGVLLDLNNKTLSFSKNGIMLGIAFEGL----PNTYLFPTIGQGSSTYSTILTVNF----GSTPFKYPIPEG 171

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig11.1226.1 vs. uniprot

BLAST of mRNA_C-linearis_contig11.1226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5KUF2_9PHAE	1.810e-96	62.25	B30.2/SPRY domain-containing protein n=1 Tax=Ectoc...	[more]
D8LU41_ECTSI	2.020e-67	76.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YJW0_9STRA	3.260e-53	34.99	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A3B9UWP9_CLOSP	2.280e-5	29.41	B30.2/SPRY domain-containing protein n=1 Tax=Clost...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003877	SPRY domain	SMART	SM00449	SPRY_3	coord: 145..268 e-value: 5.7E-7 score: 39.2
IPR003877	SPRY domain	PFAM	PF00622	SPRY	coord: 148..253 e-value: 1.7E-15 score: 57.2
None	No IPR available	GENE3D	2.60.120.920		coord: 109..288 e-value: 1.9E-21 score: 78.6
IPR001870	B30.2/SPRY domain	PROSITE	PS50188	B302_SPRY	coord: 84..269 score: 13.125
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 88..262

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig11	contig	C-linearis_contig11:1289420..1295017 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig11.1226.1	mRNA_C-linearis_contig11.1226.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig11 1288923..1295075 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig11.1226.1 ID=prot_C-linearis_contig11.1226.1|Name=mRNA_C-linearis_contig11.1226.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=388bp
MDVTHAVETVASKLEDLLVEGNQGDDGSAASDLLLLRGDDGDAPHPQQRQ
PFVSGIVDMAREVLRSVTCLLEQRDVVLLGATCRSLLEMERRFATGQEAF
PLRLTVDEQRGNEDKAVHVDTKTGILKKTPRPGMGTIMANERVDKMTCYW
EVKIEAFTGVRLEIGVATRRSIYRGGCNKDECWVFDCYGRACHRARVRGY
GCKLKAGDVLGVLLNTADNSLSFFAQGVCMGTAFRNVRPPAPGLGLYPLI
VLPSVAHETVRLTGCAGRGGASSFSFPAPVGPLLATKRTWRARPHPNDFD
LIVETYDAQVIHRLPGLDPARTTVGGLKEALVKCNEMELFTPGQLALRTQ
GALLTDDSVLLSATGVSFGSRGSQLQDIFLYVPHLIS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003877	SPRY_dom
IPR001870	B30.2/SPRY
IPR013320	ConA-like_dom_sf