prot_C-linearis_contig11.1211.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1211.1
Unique Nameprot_C-linearis_contig11.1211.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length377
Homology
BLAST of mRNA_C-linearis_contig11.1211.1 vs. uniprot
Match: A0A6H5KAS4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAS4_9PHAE)

HSP 1 Score: 563 bits (1450), Expect = 2.340e-199
Identity = 299/384 (77.86%), Postives = 319/384 (83.07%), Query Frame = 0
Query:    2 KTTTAAVTAV-AVALGGTQHCGDAFLASAPVRSG--------TSAALRTRSWAAAPSNCPARRDGAAALSMISATFGEKINTDSIVLDKTAREGIQEQYPEACAKCPTFLDEVGHGETQTFTEEQLRKRLEVAHVFVNLANLVLLSRGKNILAEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVYAIEDLDAVAEIEAIKKRVVNQEAKMKSLEGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFAAVGAEFPKDLTNLEGTDAPGDIEGTRLASFSFPVEVKDYEAFDQEAFTEMK 376
            KT   A TAV A  LG T HC  AFL SAPVRSG                            R+G   LSM+SATFGEKINTD IV+DKTARE +QE YPEACAK P FLDE+GHGET+TFTEE+LRKRLEVAHVFV+LANLVLLSRGKN+LAEDFKYYSPGTGRLDRD FLRLTKTLDVAFSTFRV PT+   YKDG VTYRRTFRA HDGYLTVGDKTYPPSQTKVISDVDLCAVSFDD GV+RSYA GLMVEVV+AIED DAVAEIE IKKRVVNQ+AKMKSLEGQESSIAYSKCK+DID M +DM+ALLE+VNSAPNTEGLGGIPGLFAAVGAEFP+DL NLEGTDA GDIEG RLASFS+PVEVKDYEAFD +AFTEMK
Sbjct:    5 KTPAVAATAVLAAVLGSTHHCAQAFLVSAPVRSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXREGLTGLSMVSATFGEKINTDRIVIDKTAREAVQELYPEACAKHPRFLDEIGHGETRTFTEEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVVPTELVVYKDGTVTYRRTFRAVHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDMGVVRSYADGLMVEVVHAIEDPDAVAEIEEIKKRVVNQQAKMKSLEGQESSIAYSKCKADIDVMKLDMEALLERVNSAPNTEGLGGIPGLFAAVGAEFPEDLKNLEGTDAEGDIEGMRLASFSYPVEVKDYEAFDTDAFTEMK 388          
BLAST of mRNA_C-linearis_contig11.1211.1 vs. uniprot
Match: A0A835ZLQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLQ1_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.070e-60
Identity = 119/276 (43.12%), Postives = 167/276 (60.51%), Query Frame = 0
Query:   90 QYPEACAKC---PTFLDEVGHGETQ-TFTEEQLRKRLEVAHVFVNLANLVLLSRGKNILAEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVYAIEDLDAVAEIEAIKKRVVNQEAKMKSLEGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFAAVGAEFPKDLTNLEGTDAPGDIEGTRLASFSFPVEV 361
            Q  EA  K    P +     HG    +  EE L++RL VA  F  +A L+LL RG+NI+A+DF Y+SP TG L+++ FL L +T D AF +   +P  FT YKDG+V+YR  +R   DG LT+GDK   P+    ISDV+LC VSFD+ G++RSYA G++V+     +D   +  IEA++ +V   + K++SL GQE +IAY K   +I+ +  ++  LLE+V+   NT GLGGI GLF AVG E+P D+ +L G      + GT     S P EV
Sbjct:   98 QESEALRKAQLPPAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLFFAVGLEWP-DVHSLLGKAPHKRVGGTMQGGISVPSEV 372          
BLAST of mRNA_C-linearis_contig11.1211.1 vs. uniprot
Match: W7U8S2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8S2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.680e-14
Identity = 70/236 (29.66%), Postives = 109/236 (46.19%), Query Frame = 0
Query:   99 PTFLDEVGHGETQTFTEEQLRKRLEVAHVFVNLANLVLLSRGKNILAEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVY-AIEDLDAVAEIEAIKKRVVNQEAKMKSLEGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFAAVGAEFPK 333
            P FL  +      T T   L +    A  F N+A  +++SRG N+L+EDF YYS  TG LDR  +L L   ++ A    R   + F    DG V Y         G L +G   +  S  K     ++C V+F++ G ++S + GL+VE      E+L A   +  + KR+ + + K++     +S  A  K + DID     ++A  EK +         G+ GL  A+G   P+
Sbjct:   87 PGFLSAIRPNSKSTDTGRALIR----AKAFANMAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGHDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVEEGSDEDEELVAAEALSGLLKRLESHKQKLEMTPTGKS--AREKIQQDIDNTQAKIEAF-EKDSETVKVAHEAGLGGLLGALGVCVPE 315          
BLAST of mRNA_C-linearis_contig11.1211.1 vs. uniprot
Match: A0A4D9DH59_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DH59_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.610e-12
Identity = 61/204 (29.90%), Postives = 98/204 (48.04%), Query Frame = 0
Query:  131 LANLVLLSRGKNILAEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVYAI-EDLDAVAEIEAIKKRVVNQEAKMKSLEGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFAAVGAEFPK 333
            +A  +++SRG N+L+EDF YYS  TG LDR  +L L   ++ A    R   + F    DG V Y         G L +G   +  S  K     ++C V+F++ G ++S + GL+VE      E+L A   +  + KR+ + + K++     +S  A  K + DID     ++A  EK +         G+ GL  A+G   P+
Sbjct:    1 MAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGQDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVEEGSDEGEELVAAEALSGLLKRLESHKQKLEMTPTGKS--AREKIQQDIDNTQAKIEAF-EKDSETVKVAHEAGLGGLLGALGVCVPE 201          
BLAST of mRNA_C-linearis_contig11.1211.1 vs. uniprot
Match: A0A7S2SCC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCC1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.540e-10
Identity = 67/271 (24.72%), Postives = 112/271 (41.33%), Query Frame = 0
Query:  124 VAHVFVNLANLVLLSRGKNILAEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTF----------RVYPTDFTAYKDGVVTYRRTFRAEHDG------YLTVGDKT---YPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVYAIEDLDAVAEIEAIKKRVVNQEAKMKSL-----EGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFAAVGAEFPKDL----TNLEGT-----DAPGDIEGTRLASFSFPVEV 361
            +A  +  L+ +V+ +RG N+L++DF ++SP TG L++D+FLRL   L      F          RV+PT       GVVT     +    G      +L  G +      P +  ++   +  AV+FDD G +     GL              + I  I  ++  + AK+K L     E  ES  ++     ++  +  ++  L E  + +P      G   L  A    FP DL    T ++G        P ++ G R+   S P ++
Sbjct:  106 MARTWAMLSPIVITARGPNVLSDDFVFFSPSTGLLEKDKFLRLNARLATLCPDFFNKLERDGEERVHPT-------GVVTLNYQPKGSFQGAVSEWSWLAKGSEAADHQAPVKKPLLGHWEAMAVAFDDQGRVLRLVSGLHAHDAEPEARNMVQSTIRDINGQIEKKLAKLKGLRKAHEENAESHPSFQATMKEMTALEEELKVLNENSHQSPTAGSFDGFRALLHAFDVPFPDDLQQCQTAIQGALMDLESPPEEVHGLRIGGISVPYDM 369          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KAS4_9PHAE2.340e-19977.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLQ1_9STRA1.070e-6043.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U8S2_9STRA2.680e-1429.66Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DH59_9STRA1.610e-1229.90Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2SCC1_9STRA5.540e-1024.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 261..281
NoneNo IPR availableGENE3D3.10.450.50coord: 123..271
e-value: 3.2E-5
score: 25.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..376
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1031091..1045020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1211.1mRNA_C-linearis_contig11.1211.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 1030074..1045270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1211.1 ID=prot_C-linearis_contig11.1211.1|Name=mRNA_C-linearis_contig11.1211.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=377bp
MKTTTAAVTAVAVALGGTQHCGDAFLASAPVRSGTSAALRTRSWAAAPSN
CPARRDGAAALSMISATFGEKINTDSIVLDKTAREGIQEQYPEACAKCPT
FLDEVGHGETQTFTEEQLRKRLEVAHVFVNLANLVLLSRGKNILAEDFKY
YSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRA
EHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVY
AIEDLDAVAEIEAIKKRVVNQEAKMKSLEGQESSIAYSKCKSDIDTMGMD
MDALLEKVNSAPNTEGLGGIPGLFAAVGAEFPKDLTNLEGTDAPGDIEGT
RLASFSFPVEVKDYEAFDQEAFTEMK*
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