prot_C-linearis_contig11.1183.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1183.1
Unique Nameprot_C-linearis_contig11.1183.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length430
Homology
[Close]
BLAST of mRNA_C-linearis_contig11.1183.1 vs. uniprot
Match: D8LGE4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE4_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 7.490e-51
Identity = 96/149 (64.43%), Postives = 125/149 (83.89%), Query Frame = 0 
Query:   26 LVEESNLLRGGGHRLQGANIALSMRFDDTVKKLERRGDHEARKVLMGLAKEAKDLSGMLAARLARMSMVNRTVLELLQKSQDGKAALMMRRAAELLVKGLANAEEEVHSLKATVQQVEGQRDHYKALLAKTASEVTTSQAYAQMSRAIG 174
            LV+ES  LR  GHRLQG++I LS+RF+DT + LE +GD EAR  ++ LAKE K L+ +LAA+LAR+SM+NRT++E+L+KS+DG+AALMMR+AAELLVKGLANAEEEV SLKA   ++E QRDHYKALLA+T SE+  S+A+AQ+S A+G
Sbjct:   18 LVQESTDLRWEGHRLQGSHIELSLRFEDTTRTLESKGDREARAAMLRLAKEFKQLNDVLAAKLARISMINRTLVEILRKSEDGQAALMMRKAAELLVKGLANAEEEVFSLKAKAGELERQRDHYKALLARTNSELDVSRAHAQISEALG 166
[Close]
BLAST of mRNA_C-linearis_contig11.1183.1 vs. uniprot
Match: A0A6H5KZE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE5_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 3.350e-47
Identity = 97/149 (65.10%), Postives = 123/149 (82.55%), Query Frame = 0 
Query:   26 LVEESNLLRGGGHRLQGANIALSMRFDDTVKKLERRGDHEARKVLMGLAKEAKDLSGMLAARLARMSMVNRTVLELLQKSQDGKAALMMRRAAELLVKGLANAEEEVHSLKATVQQVEGQRDHYKALLAKTASEVTTSQAYAQMSRAIG 174
            LV+ES  LR  GHRLQGA+I LS+RF+DT + LE +GD EAR  ++ LAKE K L+  LAA+LAR+SM+NRT++E+L+KS+DG+AALMMR+AAELLVKGLANAEEEV SLKA   ++E QRDHYKALLA T SE+  S+A+AQ+S A+G
Sbjct:   18 LVQESTDLRWEGHRLQGAHIELSLRFEDTTQTLESKGDREARAAMLRLAKEFKQLNDGLAAKLARISMINRTLVEILRKSEDGQAALMMRKAAELLVKGLANAEEEVFSLKAKAGELERQRDHYKALLATTNSELDISRAHAQISEALG 166
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGE4_ECTSI7.490e-5164.43Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KZE5_9PHAE3.350e-4765.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:580097..583830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1183.1mRNA_C-linearis_contig11.1183.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 579401..583830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1183.1 ID=prot_C-linearis_contig11.1183.1|Name=mRNA_C-linearis_contig11.1183.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=430bp
MASPQQQQQQQQQAEQGGEEQQPTDLVEESNLLRGGGHRLQGANIALSMR
FDDTVKKLERRGDHEARKVLMGLAKEAKDLSGMLAARLARMSMVNRTVLE
LLQKSQDGKAALMMRRAAELLVKGLANAEEEVHSLKATVQQVEGQRDHYK
ALLAKTASEVTTSQAYAQMSRAIGQAGGGAGGGASAASGSSAPASSGGAS
ADDGDIKRSASGSDISRGSSSSTGKGNGKGKGKAPARQAQQNRPVGAGGA
AAGATTPASRSTGGSGSGSGDGSAAAAAAAAAEGGNQHGEAEKSKRGRGR
TAAAAAAAPAAPAAGRGARISAPGPSGGGTAATGDAVAGTTPTALASKKR
RRGTAASSAGSGDSGGGDVDFKPHREQPDSLIGEGDSDGDGEGGGGSDEV
GIEGGEEAAGEGRSRRRRRGEAASSTGRGR
back to top