prot_C-linearis_contig11.1182.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1182.1
Unique Nameprot_C-linearis_contig11.1182.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length441
Homology
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A6H5L0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C0_9PHAE)

HSP 1 Score: 425 bits (1092), Expect = 1.970e-143
Identity = 268/446 (60.09%), Postives = 302/446 (67.71%), Query Frame = 0
Query:    7 RRRRARPTCS----RQKVILCACLGLGARSMIPTAEAWVPAAT--LLQGRGTSASTIDDXXXXXXXXXNAAIS-HRPVFATNKGRWGHQXXXXXXXXXXXVGKTFXXXXXXXXXXXXXXXGVAAPTAAASGTAVSF--SSRESAWRGRPVADALAVGSAGRRGGVGVRMSMAEEERGDNN---NAVLGALAIAGFGAVYYVLHDHAAGAGGLGLGTATGAVSTYSASLESVVETAKASPSAATTAIQAFLASSVTKIEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDGGGMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEMEEIEP 440
            RRRR+RP CS    RQKV+LCACLGLGA+S++P AEAWVPAA   L+Q +G  A                  S H P   +N  R G Q                                 A  ++ A G   +F  S+  S W G+ V  A               MSMAEE+ G  +   NA+LGA+A+AG GA+YY LHDH  G GG G          +SA++ES VETAKA  SA +TA+QAFL+SSVTK+EELGPLG +YFGLLYVLAEVLIIPAIPLT AAGFLFG AGGTAVVLTSATIAAAISFQLGRTLLR+ VEGLL+ENPKFRALD AIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDF EYMMGTL+GFFPGTLAYVYGGTLGK +TDGGG  LPWYGY AGA   A+LLKTVGEIAT A+EEMEE +P
Sbjct:    9 RRRRSRPACSWQSRRQKVMLCACLGLGAQSIVPAAEAWVPAAPALLVQQQGRVAPPPTKTMHVGVGARGGTFSYHHPSQGSN--RLGGQQQQRQHCRRLAF---------------------APISSQAWGIERTFGQSALSSRWTGQGVVVANXXXXXXXXXXXXXMMSMAEEDSGTKSQGFNAMLGAVALAGLGALYYGLHDHTLGGGGGG---------PFSATVESAVETAKAGHSAPSTAVQAFLSSSVTKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLLEENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGGTGLPWYGYVAGAALTAYLLKTVGEIATAAVEEMEEADP 422          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A835ZF34_9STRA (Snare associated Golgi protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF34_9STRA)

HSP 1 Score: 229 bits (583), Expect = 6.750e-70
Identity = 121/187 (64.71%), Postives = 150/187 (80.21%), Query Frame = 0
Query:  251 IEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDGG-GMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEME 436
            I+  GP+G LYFG LYV+AEVL IPA+PLT ++G+LFG+ GGT VV+ SATIAA ISF LGRT LR+ VE LL +N KF+A+D+AI +EGFK+ILLLRLSPIFPFA+SNYLYG+TSV F+EY+  +++GF PGT+AYVYGG    +L DGG G  LPWYGYA G V VA  +K VG+IAT A+ E+E
Sbjct:    2 IQSAGPMGYLYFGALYVIAEVLAIPALPLTASSGYLFGLVGGTTVVICSATIAAGISFLLGRTFLRKWVEELLGDNAKFKAIDSAIGREGFKIILLLRLSPIFPFAISNYLYGITSVPFWEYLGASMLGFLPGTIAYVYGGGQLGSLVDGGDGGGLPWYGYALGLVAVAATIKLVGDIATKAVAEIE 188          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A7S1FUG6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUG6_9STRA)

HSP 1 Score: 228 bits (581), Expect = 3.950e-69
Identity = 121/199 (60.80%), Postives = 151/199 (75.88%), Query Frame = 0
Query:  241 QAFLASSVTKIEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDGGGMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEMEEIE 439
            Q  L  +V +IE  G +G LYFG++Y +AE+L IPAIPLT +AG+LFGV  GTAVVL +A++AA++SF LGR  LR  VE +L++NP+F+A+D AI KEGFK++LLLRLSPIFPFALSNYLYGVTSV F+ Y  GT++GF PGTLAYVY G  GKALT   GMA PWY YA G    A  +K + +IAT  IE+ME +E
Sbjct:   25 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDMEAME 223          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A7S1FUT1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUT1_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.640e-67
Identity = 121/199 (60.80%), Postives = 151/199 (75.88%), Query Frame = 0
Query:  241 QAFLASSVTKIEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDGGGMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEMEEIE 439
            Q  L  +V +IE  G +G LYFG++Y +AE+L IPAIPLT +AG+LFGV  GTAVVL +A++AA++SF LGR  LR  VE +L++NP+F+A+D AI KEGFK++LLLRLSPIFPFALSNYLYGVTSV F+ Y  GT++GF PGTLAYVY G  GKALT   GMA PWY YA G    A  +K + +IAT  IE+ME +E
Sbjct:  163 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDMEAME 361          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A7S0CCP1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCP1_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.480e-65
Identity = 113/195 (57.95%), Postives = 146/195 (74.87%), Query Frame = 0
Query:  245 ASSVTKIEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDGGGMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEMEEIE 439
            A +VT+I+++GP G  YFG +Y +AE+L IPAIPLT +AG+LFGV  GT +VL SA+IAA+ISF +GRTLLR  VEG+L E PK + LD AI+ +GFK++LL+R++PIFPFALSNYLYGVTSV F+ Y  GT++GF PGT AYVY G +GK LT G   A PWY YA G    +  LK  G+IA+  I+ +E+ E
Sbjct:    1 AETVTQIQDMGPSGVAYFGFIYTIAEILAIPAIPLTASAGYLFGVRDGTLIVLLSASIAASISFFIGRTLLRSYVEGILGEYPKLQKLDRAISSQGFKIMLLVRIAPIFPFALSNYLYGVTSVKFWPYFWGTMLGFAPGTFAYVYSGVVGKILTSGDDAAQPWYVYAGGLALFSGFLKIGGDIASDIIDNIEDEE 195          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A7S4I716_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I716_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.290e-65
Identity = 123/213 (57.75%), Postives = 154/213 (72.30%), Query Frame = 0
Query:  232 SPSAATTAIQAF-------LASSVTKIEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDGGGMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEMEE 437
            S S  T A+Q F       L + V  +E +GP G LYFG++Y +AE+L IPAIPLT +AG+LFGV  GTAVVL SA+IAAAISF +GRTLLR  VE +L++ PKF+ +D AI +EGFK++LLLRLSPIFPFALSNYLYG TS+ F+ Y  GT++GF PGT+AYVY G +GKALT     A PWY YA G   +A  LK V ++AT  IE ++E
Sbjct:  164 SSSGVTMAVQRFFSDPNASLEAVVKSVEAMGPSGFLYFGIIYTVAEILAIPAIPLTASAGYLFGVTEGTAVVLASASIAAAISFIIGRTLLRTYVESVLEDYPKFKKIDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSIGFWPYFFGTMLGFTPGTIAYVYTGEIGKALTLDSATAEPWYVYAGGMTLLAGCLKVVADVATGIIENLDE 376          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: D8LGE5_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE5_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.190e-64
Identity = 183/327 (55.96%), Postives = 211/327 (64.53%), Query Frame = 0
Query:    7 RRRRARPTCS----RQKVILCACLGLGARSMIPTAEAWVPAATLL--QGRGTSASTIDDXXXXXXXXXNAAISHRPVFATNKGRWGHQXXXXXXXXXXXVGKTFXXXXXXXXXXXXXXXGVAAPTAAASGTAVSF--SSRESAWRGRPVADA-LAVGSAGRRGGVGVRMSMAEEERGDNN---NAVLGALAIAGFGAVYYVLHDHAAGAGG----LGLGTATGA-VSTYSASLESVVETAKASPSAATTAIQAFLASSVTKIEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLR 316
            RRRR+RPTCS    R+KV+LCACLGLGA+S++P AEAWVPAA  L  Q RG                    ++  P    + G     XXXXXXXXXXX     XXXXXXXX         A  ++ A G   +F  S+  S W G+ V  A                 SMAEE+ G  +   NA+LGA+A+AG GA+YY LHDH  G GG     GLGT TG   S Y+AS+ES VETAKA  SAA+TA+QAFL+SS+TK+EELGPLG +YFGLLYVLAEVLIIPAIPLT AAGFLFG AGGTAVVLTSATIAAAISFQLGRTLLR
Sbjct:    9 RRRRSRPTCSWQSRREKVMLCACLGLGAQSIVPAAEAWVPAAPALHVQQRGR-------------------VAQPPTKTMHVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRCRRLAFAPISSQAWGIERTFGQSALSSRWTGQGVVGANXXXXXXXXXXXXXXXXSMAEEDSGTESQGYNAMLGAVALAGLGALYYGLHDHTLGGGGGANLAGLGTDTGGPFSAYAASVESAVETAKAGHSAASTAVQAFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLR 316          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A448YYH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYH2_9STRA)

HSP 1 Score: 218 bits (555), Expect = 5.170e-63
Identity = 117/189 (61.90%), Postives = 141/189 (74.60%), Query Frame = 0
Query:  252 EELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALT-DGGGMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEMEEIE 439
            E +GPLG  YFG+ Y +AE+L IPAIPLT +AG+LFG   GTAVVL SA++AA +SF +GRT LRE VEGLL+ENP+F  LD AI +EGFK++LLLRLSPIFPFALSNYLYG TS++F  +  GTL+GF PGT+AYVY G +GKALT D GG A PWY Y  G    A  LK V + AT  + E+E  E
Sbjct:  206 ESMGPLGVAYFGVAYCIAEILAIPAIPLTASAGYLFGPVQGTAVVLLSASVAAGVSFWIGRTFLREYVEGLLEENPRFGKLDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSINFSAFFGGTLLGFAPGTIAYVYTGYVGKALTGDAGGDAYPWYVYGGGLALFAAFLKVVADEATRVVREIEAEE 394          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A7S2K1V4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1V4_9STRA)

HSP 1 Score: 215 bits (548), Expect = 7.080e-63
Identity = 113/170 (66.47%), Postives = 137/170 (80.59%), Query Frame = 0
Query:  244 LASSVTKIEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDGGGMALPWYGYAAG 413
            L + V+++E +G LG LYFG+ Y +AE+L IPA PLT +AG+LFG+ GGT +VL SA+IAA+ISF +GRT LR  VEGLL++ PKF+A+D AI KEGFK+ILLLRLSP+FPFALSNYLYGVTSV F EY  GTL+GF PGT+AYVY G +GKALT   G A PWY YAAG
Sbjct:  156 LENIVSQVETMGNLGFLYFGIFYTIAEILAIPAFPLTCSAGYLFGLQGGTTIVLLSASIAASISFLIGRTALRSYVEGLLEKYPKFKAMDKAIGKEGFKLILLLRLSPLFPFALSNYLYGVTSVRFVEYFWGTLLGFLPGTMAYVYSGDVGKALTLDSGNAQPWYVYAAG 325          
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Match: A0A7R9WRQ5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRQ5_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.670e-62
Identity = 108/190 (56.84%), Postives = 142/190 (74.74%), Query Frame = 0
Query:  248 VTKIEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSATIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDGGGMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEMEE 437
            V  +  +GPLGA+YFG+ Y +AE+L IPAIPLT +AG+LFG   GT VVL SA+IAAAISF +GRTLLR+ VEG+L + PKF  +D AI KEGFK++ LLRLSP+FPFALSNYLYG +S++F  +  GTL+GF PGT+AYVY G +GKALT  G    PWY Y  G   ++ L+K + + AT  ++E+++
Sbjct:   77 VDAVASMGPLGAVYFGVAYTIAEILAIPAIPLTASAGYLFGPVQGTGVVLVSASIAAAISFLIGRTLLRDYVEGVLQDFPKFAKIDKAIGKEGFKLMFLLRLSPVFPFALSNYLYGASSINFSAFFWGTLLGFAPGTMAYVYTGYVGKALTTEGSEVYPWYFYVGGLALLSGLIKVLADTATRIVDELDD 266          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0C0_9PHAE1.970e-14360.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF34_9STRA6.750e-7064.71Snare associated Golgi protein-domain-containing p... [more]
A0A7S1FUG6_9STRA3.950e-6960.80Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S1FUT1_9STRA2.640e-6760.80Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S0CCP1_9STRA1.480e-6557.95Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4I716_9STRA4.290e-6557.75Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
D8LGE5_ECTSI1.190e-6455.96Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectoc... [more]
A0A448YYH2_9STRA5.170e-6361.90Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2K1V4_9STRA7.080e-6366.47Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7R9WRQ5_9STRA2.670e-6256.84Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 274..392
e-value: 2.7E-23
score: 82.7
NoneNo IPR availablePANTHERPTHR46826FAMILY NOT NAMEDcoord: 201..435
NoneNo IPR availablePANTHERPTHR46826:SF1coord: 201..435
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 307..344
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 391..401
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 364..368
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 369..390
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 402..421
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..277
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 422..440
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 283..306
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 345..363
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 278..282
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..258
NoneNo IPR availableTMHMMTMhelixcoord: 372..394
NoneNo IPR availableTMHMMTMhelixcoord: 404..421
NoneNo IPR availableTMHMMTMhelixcoord: 178..197
NoneNo IPR availableTMHMMTMhelixcoord: 257..279
NoneNo IPR availableTMHMMTMhelixcoord: 343..365
NoneNo IPR availableTMHMMTMhelixcoord: 284..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:575601..579115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1182.1mRNA_C-linearis_contig11.1182.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 574872..579184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1182.1 ID=prot_C-linearis_contig11.1182.1|Name=mRNA_C-linearis_contig11.1182.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=441bp
MDLPPLRRRRARPTCSRQKVILCACLGLGARSMIPTAEAWVPAATLLQGR
GTSASTIDDTTRRGGGGGNAAISHRPVFATNKGRWGHQQQQQRRRRQQGV
GKTFAIAGGGGGGSGGGGWGVAAPTAAASGTAVSFSSRESAWRGRPVADA
LAVGSAGRRGGVGVRMSMAEEERGDNNNAVLGALAIAGFGAVYYVLHDHA
AGAGGLGLGTATGAVSTYSASLESVVETAKASPSAATTAIQAFLASSVTK
IEELGPLGALYFGLLYVLAEVLIIPAIPLTTAAGFLFGVAGGTAVVLTSA
TIAAAISFQLGRTLLREPVEGLLDENPKFRALDTAIAKEGFKVILLLRLS
PIFPFALSNYLYGVTSVDFFEYMMGTLIGFFPGTLAYVYGGTLGKALTDG
GGMALPWYGYAAGAVFVAFLLKTVGEIATTAIEEMEEIEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc