prot_C-linearis_contig109.1111.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig109.1111.1
Unique Nameprot_C-linearis_contig109.1111.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length317
Homology
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 5.190e-116
Identity = 212/317 (66.88%), Postives = 229/317 (72.24%), Query Frame = 0
Query:    1 MSSLVHRRKGGSLD-GGKKTIAVRYGDREHLVSWFAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTLDATPAAATAAVATAVLGGNVGEGGHATKRGSSSIKRVGGGSGAADDSRSGRRRSEDGFHGSXXXXXXXXXXHSNGKSLHGGGDGSIGNNXXXXXXXXXEXRXGAAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIYLMAGVNVVEDA 316
            MSSL HR  GG+LD G KK I VRY  REH VSWFAGASDE+ITRTIE+AL LPRGTPAV+RDPEDGSALAVSDSLPDGLT+DAT   A                                 SG  +D    RRR+E   +G           +S+ K  H     S G   XXXXXXXX X X AA EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGS +MDSTA+ALGVAFV CTLFTYMTGWLRY RVKEVLTWTGSQVKG+FGRFGL+YFTWFLG +LVLTVP+Y +AGVNVVEDA
Sbjct:    1 MSSLRHR-TGGTLDVGSKKAITVRYEGREHAVSWFAGASDEAITRTIELALRLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAVPAC--------------------------------SGGDND----RRRAESSGNGFYGRGESGNNKNSDAKPAH----DSAGGIGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDA 276          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: A0A7S3YD22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD22_HETAK)

HSP 1 Score: 120 bits (301), Expect = 7.880e-29
Identity = 65/119 (54.62%), Postives = 81/119 (68.07%), Query Frame = 0
Query:  187 QEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIY 305
            QEF+GELLKFERVNAHLANERTWLAWVRTAL+VL  A + + LT+D  S +       LG  ++   L TY TGWLRYA+V+E+L   GS +K KF RFGL +   +L   L++T   Y
Sbjct:  118 QEFQGELLKFERVNAHLANERTWLAWVRTALAVLSSAFTFLGLTEDFASGT-QIFVFVLGGFYIGNVLLTYGTGWLRYAQVREILGLPGSMIKPKFNRFGLSHQARYLAVLLLVTGVSY 235          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: A0A7S2Y0E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E1_9STRA)

HSP 1 Score: 120 bits (301), Expect = 8.080e-29
Identity = 63/119 (52.94%), Postives = 80/119 (67.23%), Query Frame = 0
Query:  187 QEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIY 305
            ++FRGELLKFERVNAHLANERT+LAWVRTALSVL  A S+ SLT+D    +        G  +V+  LFTY TGW+RY++V+ +L    S+VK +FGRFGL +   FL    + T   Y
Sbjct:  120 KKFRGELLKFERVNAHLANERTFLAWVRTALSVLSSAFSIDSLTEDFSDGAFKVMVFIFGCLYVVGVLFTYTTGWVRYSQVRAILGLPASKVKAQFGRFGLSHVAKFLAFLFLFTAIGY 238          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.220e-28
Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 0
Query:  189 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEY 289
            FRG++LKFERV AHLANERTWLAWVRTALS L +A SL++L+DD  S S       +G   V   LFT++TGWLRY RVK+VL  T S++   FGRFGL +
Sbjct:   91 FRGQVLKFERVQAHLANERTWLAWVRTALSALTIAFSLLTLSDDASSAS-QLALFVMGSCMVANVLFTFVTGWLRYVRVKDVLMLTRSEMSENFGRFGLSH 190          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: A0A7S2WVC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC3_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.100e-27
Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 0
Query:  189 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIYL 306
            FRG++LKFERV AHLANERTWLAWVRTAL+ L ++ +L++L+DD     +      +G   V+  LFT++TGWLRY RVK+VL     ++  +FGRFGL +   FL   LV     YL
Sbjct:  115 FRGQVLKFERVQAHLANERTWLAWVRTALAALSISFTLLTLSDDATKDWLALFLFVVGCLMVVNVLFTFITGWLRYVRVKDVLMLRKQEMSDEFGRFGLSHHARFLSALLVAISIAYL 232          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: A0A7S2GM95_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM95_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.290e-27
Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 0
Query:  185 AAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIYLMAG 309
            A+  FRG++LKFERV AHLANERTWLAWVRTALS L +A SL++L+D+     +  T   +G   V   L T++TGWLRY RVK+VL      +   FGR GL +   FL   L +    Y+  G
Sbjct:   63 ASMAFRGQVLKFERVQAHLANERTWLAWVRTALSALSIAFSLLTLSDESTKQWLKVTLFVVGSLMVANVLMTFVTGWLRYVRVKDVLMLDKQDMSANFGRLGLSHQARFLSLLLFVISFAYITGG 187          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: A0A7S2G4H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4H1_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.320e-24
Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 0
Query:  189 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIYLMAG 309
            F+ ++LKF+R+NAHLANERTWLAW+RT  S+L   L+L +  +D  S +      A+G A ++   FTYMTGW+RY +VKE+L      +  K GR  L+Y T+ + G L     +Y M G
Sbjct:   58 FQKQMLKFDRINAHLANERTWLAWIRTTFSLLSCGLTLQTYANDSSSGTWHWWLFAVGCATIVSMDFTYMTGWIRYGKVKEILQQNKEVLGPKMGRLKLKYQTFLVFGTLCTVAVVYWMGG 178          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: A0A7S3K4A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4A5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.920e-23
Identity = 52/121 (42.98%), Postives = 77/121 (63.64%), Query Frame = 0
Query:  189 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIYLMAG 309
            FR +L+KFE + AHLANERT+LAW+RTAL+ L ++ SL++L  D     + +   ALG AFV     T++TGWLR+AR++++L    +QV   F R GL +  +F+     L   +YL+ G
Sbjct:   82 FRRQLIKFENIQAHLANERTFLAWIRTALASLSISFSLLALVADASKNWLAACLYALGAAFVFSVFTTFLTGWLRFARIRDILMLAQNQVPTDFHRIGLSHQAYFIAILCGLLTFLYLVGG 202          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: F0YI70_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI70_AURAN)

HSP 1 Score: 103 bits (258), Expect = 6.260e-23
Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = 0
Query:  189 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIYLMA 308
            FR +L+KFE + AHLANERTWLAWVRT+LS L VA SL++L  D   + +      LG  F++     ++TGWLRYAR+++VL  T  +V   F R G+ +    +G   +     YL A
Sbjct:   88 FRKQLIKFENIQAHLANERTWLAWVRTSLSALSVAFSLLTLVGDSRESWLAVVLFLLGSGFIVSVFTAFLTGWLRYARIRDVLMLTKREVPAHFHRIGVRHQARLMGLLFIFLTATYLCA 207          
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.590e-17
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 0
Query:  188 EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALAL---GVAFVLCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVLTVPIYLMAG 309
            +F+ + +KFERV +HLANERTWLAW+R AL++L  A ++  L D +      + +LAL   G+ +VL    T + GWLRY R K +L  +   +   FG  G+      LG  LV TV  Y   G
Sbjct:   98 QFQDQYVKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFTVGCYWSLG 222          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LKT4_ECTSI5.190e-11666.88DUF202 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S3YD22_HETAK7.880e-2954.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2Y0E1_9STRA8.080e-2952.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FKJ2_9STRA1.220e-2859.41Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2WVC3_9STRA2.100e-2750.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GM95_9STRA6.290e-2748.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2G4H1_9STRA4.320e-2443.80Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3K4A5_9STRA2.920e-2342.98Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
F0YI70_AURAN6.260e-2343.33Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S2DFA2_9STRA4.590e-1740.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003807Domain of unknown function DUF202PFAMPF02656DUF202coord: 202..267
e-value: 1.8E-14
score: 53.9
NoneNo IPR availablePANTHERPTHR34187:SF2INNER MEMBRANE PROTEIN YIDHcoord: 201..272
NoneNo IPR availablePANTHERPTHR34187FAMILY NOT NAMEDcoord: 201..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 285..308
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 231..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 309..316
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 265..284
NoneNo IPR availableTMHMMTMhelixcoord: 242..264
NoneNo IPR availableTMHMMTMhelixcoord: 210..227
NoneNo IPR availableTMHMMTMhelixcoord: 285..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig109contigC-linearis_contig109:226796..233076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig109.1111.1mRNA_C-linearis_contig109.1111.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig109 226576..234499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig109.1111.1 ID=prot_C-linearis_contig109.1111.1|Name=mRNA_C-linearis_contig109.1111.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=317bp
MSSLVHRRKGGSLDGGKKTIAVRYGDREHLVSWFAGASDESITRTIEIAL
GLPRGTPAVIRDPEDGSALAVSDSLPDGLTLDATPAAATAAVATAVLGGN
VGEGGHATKRGSSSIKRVGGGSGAADDSRSGRRRSEDGFHGSSESGGNSS
SSHSNGKSLHGGGDGSIGNNGSGGGGGSGEGRGGAAQEFRGELLKFERVN
AHLANERTWLAWVRTALSVLGVALSLISLTDDMGSTSMDSTALALGVAFV
LCTLFTYMTGWLRYARVKEVLTWTGSQVKGKFGRFGLEYFTWFLGGALVL
TVPIYLMAGVNVVEDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003807DUF202