prot_C-linearis_contig108.1055.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig108.1055.1
Unique Nameprot_C-linearis_contig108.1055.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length367
Homology
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: D7FZL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZL7_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 6.300e-133
Identity = 257/371 (69.27%), Postives = 281/371 (75.74%), Query Frame = 0
Query:    1 MDAAVETGNLRRHLEKALSSEDVERMDDVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----DLSVSVEVDSVLADDRLAPSRLRMRRKLFDTLLLGSPEEERLPAAHVAKEVECAMDTNSPYFSKKEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWKFC 366
            MDA+ ET  LRR LEKA+S+EDVER+ DVL SLG V+VTLA L+ESKVGATVSKLKKH +E +S SAKALVKKWK++AEA G Q XXXXXXXXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXX                              S     +L  ++EVDS+L+DD  AP RL+MRRK+FDTLLLGS E+ER+P A VAK VECAM+ N+PY SKK  YL KARQLVFNLKKNDQLRQDVREGLV PQRLV MTSTELM KDK+E MDKAVSERTEARMLDWYDKN+DKINKQCGIKET+GMFECGRCKSTKTTYTQKQTRSADEPMTTFVTC NCKNRWKFC
Sbjct:    1 MDASAETAVLRRQLEKAVSAEDVERIADVLGSLGKVEVTLAVLQESKVGATVSKLKKHADEEVSKSAKALVKKWKRVAEASGVQGXXXXXXXXXXXXXXSPPGSAGKGSGASKQEVPSPSGXXXXXXXXXXXXXXXXXXXXXXATAATSPLKGAVGKTATSSTSEAVPLSRQTSGSSTSELCTTLEVDSILSDDEPAPLRLKMRRKMFDTLLLGSSEDERIPTARVAKGVECAMNENNPYLSKKASYLDKARQLVFNLKKNDQLRQDVREGLVEPQRLVAMTSTELMAKDKREAMDKAVSERTEARMLDWYDKNEDKINKQCGIKETDGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 371          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: A0A836CH25_9STRA (Transcription factor S-II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH25_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.660e-55
Identity = 156/364 (42.86%), Postives = 205/364 (56.32%), Query Frame = 0
Query:    3 AAVETGNLRRHLEKALSSEDVERMDDVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVLADDRLAPSRLRMRRKLFDTLLLGSPEEERLPAAHVAKEVECAMDTNSPYFSKKEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWKFC 366
            AA E   LR  +EKA++  D  R+ D+L  L  VD+T+  + ESK+G+ VSKL+KH +  ++  AKALVK WK++A+A G +       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                       +VS    + L +D L P+RL+MR+K  +  +L   +E   P   +A E  C ++      + K  ++   RQL+FNLKKN  LR DV  G V    L+ M+ TE++   K++ M+    +  +AR +DW +KNQD+INKQCGI   EGMFECGRCKS KT Y QKQTRSADEPMTTFVTC +C  +W+FC
Sbjct:    5 AAREVAELRDAMEKAVTKADAPRVCDILSQLEKVDMTVDIMAESKIGSAVSKLRKHADSRVAGQAKALVKVWKQLAQAAGVEGSNRAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASAEQKLRVQAPVEKALKDLRRGSTDSFVSDASPRVGGAKPAKAQTPKA-----TVSAAHMASLQEDGLLPNRLKMRQKFLEIFVLPEDDESAAPDGQLAAEAACGVERE---LNAKFPFV---RQLLFNLKKNAALRSDVVHGAVPCGALIAMSPTEMLSAAKRQAMEAQAQDLVDARRMDWAEKNQDEINKQCGITNMEGMFECGRCKSKKTHYYQKQTRSADEPMTTFVTCLHCGKKWRFC 357          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: A0A7S2XYD9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYD9_9STRA)

HSP 1 Score: 172 bits (435), Expect = 5.080e-47
Identity = 135/358 (37.71%), Postives = 179/358 (50.00%), Query Frame = 0
Query:   14 LEKALSSED-----VERMDDVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVLADDRLAPSRLRMRRKLFDTLLLGSPEEERLPAAHVAKEVECAMDTNSPYFSKKEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWKFC 366
            LEKA++ E       ER+ D++  L  V VT+  LR++KVG T+ KL+KH ++ ++ +AK L+KKWK++AE E                                                                         XXXXXXXXXX XXXX    +D    V  D V  ++ L P RL++R ++F T+     +      A  A+EVE A+     +  K ++Y  K RQL FNLKKN +LR DV  G +AP  LV ++S EL   D + E  +   +   A   DW   N  K+N  CGIK+ EG+F+C RCKS KTT+TQKQTRSADEPMT FVTC NC NRWKFC
Sbjct:   16 LEKAIAKESNGESKAERIIDLIGRLNEVPVTVDDLRDTKVGLTIGKLRKHSDQSVAGAAKKLLKKWKRMAEGE----------------------------------------MTGEAAANTPAPAPSPPAASNGASEEGVASNGGXXXXXXXXXXDXXXXDKKKADDEGGVP-DLVQGEEGLVPQRLKVRERMF-TIFTQDVDASVQKGAAAAREVEAAIHEIFNFSQKTKEYSAKVRQLNFNLKKNSKLRADVVNGSLAPDLLVQLSSDELATDDLRNERARIREDAINASRSDWDAANDQKLNAMCGIKQMEGLFQCFRCKSKKTTHTQKQTRSADEPMTVFVTCLNCGNRWKFC 331          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: A0A8K1CMA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMA4_PYTOL)

HSP 1 Score: 153 bits (387), Expect = 3.480e-40
Identity = 140/361 (38.78%), Postives = 186/361 (51.52%), Query Frame = 0
Query:   10 LRRHLEKALS--SEDVERMDDVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVLADDRLAPSRLRMRRKLFDTLLLGSPEEERLPAAHVAKEVECAM----DTNSPYFSKKEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWK 364
            L + L K +S  S D     DVL++L    +T+  L+E+K+G TV KL+K+ NE I+N AK+LVK WK +A++                     XXXXXXXXXXXXXXXXXX                                                          +   +D V         R  +R KL +TL L    EE    + VA  +E AM    + + P  +KK DY  K RQL FNLKKN QLR+D+ + +V+ ++L+ MT  EL  ++K+ E+ K   +  +   LDW D N+DKINKQCGI+ ++G+F CGRCKS+KT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:    7 LHKRLLKFVSGDSTDAGATLDVLRTLETKTMTVTMLKETKLGHTVGKLRKNENEKIANLAKSLVKAWKTMAQSPKPSKVTLERKTSSTSVGSSDXXXXXXXXXXXXXXXXXXALKPRSNQPTGGPF--------------------------------------------IPAGLDKV---------RATVRTKLKETLELT---EEGGNPSDVAMAIEIAMAKQFNMSLPGENKK-DYTAKFRQLSFNLKKNAQLREDLLQDMVSAEQLIAMTPEELATEEKRNEIMKLRDDAFQRARLDWADANEDKINKQCGIENSKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 310          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: W4G1Y0_9STRA (Transcription elongation factor S-II n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1Y0_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.980e-39
Identity = 114/364 (31.32%), Postives = 164/364 (45.05%), Query Frame = 0
Query:    9 NLRRHLEKALSSEDVER--MDDVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVLADDRLAPSRLRMRRKLFDTLLLGSPEEERLPAAHVAKEVECAM------DTNSPYFSKKEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWK 364
            NL + L K L+ ED ++  + D ++ L  VD+TLA L+++K+G T++KL+KH  E +S+ AK L+KKWK +A                                                                                               S    S   + +     L   R  +RRKL + L +    E    A  VA  +E AM      D+       K+ Y  K RQ+ FNLKKN+ LRQ++    ++  +L+ M+  E+  +++++EMD+   +  +   LDW + N DKINK CGIK+T G+F CGRCKSTKT+ TQ+QTRSADEPMT FV C NC  RWK
Sbjct:    6 NLHKRLTKFLAGEDNDQNGVADAMEHLNTVDMTLAILKDTKIGQTIAKLRKHDAEVVSSKAKHLLKKWKTLASRPSDSDIKVDPDVKSEMGTPKVSPTASDLSAKDESKWSVKVETIKDEPKRPVKDDPAATPITIRRAPVHAF-----------------------SSQRNSTPFEFI--PKGLQDVRATVRRKLKEVLSVAETPELVAEAEFVAVGIEVAMAREFKMDSARNTNEGKKHYTDKYRQVSFNLKKNESLRQNLLTHHISGDQLIKMSPDEMATEERRKEMDQLRDDAFQRARLDWAEANADKINKACGIKDTRGLFTCGRCKSTKTSNTQQQTRSADEPMTVFVICHNCGKRWK 344          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: A0A7S2ETU1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ETU1_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.860e-39
Identity = 123/364 (33.79%), Postives = 159/364 (43.68%), Query Frame = 0
Query:   15 EKALSSE-DVERMDDVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVLAD-----DRLAPSRLRMRRKLFDTL-----LLGSPEEERLPAAHVAKEVECAMDTNSPYFSKKEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKET---EGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWK 364
            E  L +E D ER  D+L+ L  V +TL  L E+ VG  VSKLK H +  + + AKALVKKWKK+A+  G                                                                                           S  + +    S+ A+     D+L P R  +  KL D L     +L    +  L AA V + +      NS     K  Y  KAR L FNLKKN QLR++V    ++P++LV M   +L   DK +   +A ++ +E+R+LDW  KN+ KIN  CGIK       +F CGRCKSTKTT TQKQTRSADEPMT FV C NC NRWK
Sbjct:   21 ESLLKAEGDKERCLDILQRLEEVPMTLKLLSETLVGTVVSKLKSHKDAAVQSKAKALVKKWKKLAKEGGV------------------------------------------------------------------GTSTSTTNVAKPKKAGDLVRRSSTSSTASATTAPSIPANIQQEWDKLGPLRKNIVTKLHDILYASSKVLSDKSDTALRAAAVERAI------NSISRGDKGAYTAKARSLFFNLKKNQQLRENVLLEHISPKQLVTMPPDQLASADKVKARTEAANQLSESRLLDWEQKNEAKINDMCGIKGDLLKASLFTCGRCKSTKTTSTQKQTRSADEPMTVFVLCMNCGNRWK 312          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: A0A7S0XKL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XKL3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 5.670e-39
Identity = 138/362 (38.12%), Postives = 174/362 (48.07%), Query Frame = 0
Query:   16 KALSSEDVERMDDVLKSLGNVD-VTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVL-ADDRLAPSRLRMRRKLFDTLLLGSP-------EEERLPAAHVAKEVECAMDTNSPYFSKKEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKET---EGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWKF 365
            ++LS EDVE + D+L+ L  +D V L  L ++ +G  VSK KKH    I  +AKALVKKWK  A+ E A  XXXXXXXXXXXXXXXXX                                                                          S +   D +  A   L P R    +KL D L    P         + L    V +  +  M   + + S+K++YLGKAR L FNLKKN  L   +  G V  + LV MTS +L+  +K++E ++      +A MLDW  +N+DKIN+ CGIK       +F CGRCKSTKTT TQKQTRSADEPMT FV C NC NRWKF
Sbjct:   24 ESLSDEDVESLKDMLQQLDALDDVNLEVLTKTLIGTVVSKFKKHAE--IGPTAKALVKKWKAAAKGEAAAGXXXXXXXXXXXXXXXXXPKRRN---------------------------------------------------------------------STNAATDEMKEAWFTLQPYRQTTCQKLNDVLEKAKPTLIKQGINADALDHLTVERATDIEMAIQTKFMSQKQEYLGKARSLCFNLKKNTGLAAQIILGQVPSKELVGMTSEQLISDEKRKEFEERKKSLMDANMLDWEAQNEDKINEMCGIKGELLQASLFTCGRCKSTKTTSTQKQTRSADEPMTVFVLCLNCNNRWKF 314          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: A0A7S2PF17_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PF17_9STRA)

HSP 1 Score: 150 bits (378), Expect = 9.830e-39
Identity = 147/354 (41.53%), Postives = 182/354 (51.41%), Query Frame = 0
Query:   24 ERMDDVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIA-EAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVLADDRLAPSRLRMRRKLFDTLLLGSPEE--ERLPAAHV-------AKEVECAMDTNSPYFSKKEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKET---EGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWK 364
            E++ D+L+ L    + LA L E+ +GA+VSKLKKH N  I+N+AK LVKKWK +A +A+ A XXXXXXXXXXXXXXXXXXXXXX                                                                   S+LS   E         L P R+ + +K F T+ L S  E  + L  A V       A EV+ A+DT S     K  Y+ K R LVFNLKKN  LR+ V  G V+  RL  M+S EL+ ++K +E D+ V    ++R LDW   N+ KIN+ CGIK       +F CGRCKS KTT TQKQTRSADEPMT FV C NC NRWK
Sbjct:   28 EKILDILQRLEKQKIDLAVLTETLIGASVSKLKKHENAEIANTAKGLVKKWKGVATQAQAAXXXXXXXXXXXXXXXXXXXXXXXAKSAPSSAKLKRLSSAGS-------------------------------------------------SELSADAEFVG------LPPHRINICKK-FHTIFLMSKNELSKELNEAAVGQLCISRAAEVDAAIDTWSK--GMKPTYMEKVRSLVFNLKKNGPLREQVILGQVSGDRLTRMSSEELLSEEKAKERDETVKNLQDSRRLDWDTANEKKINEMCGIKGDLLKASLFTCGRCKSVKTTSTQKQTRSADEPMTVFVLCLNCNNRWK 323          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: K3WZ99_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ99_GLOUD)

HSP 1 Score: 150 bits (378), Expect = 1.010e-38
Identity = 128/349 (36.68%), Postives = 166/349 (47.56%), Query Frame = 0
Query:   20 SEDVERMDDVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVLADDRLAPSRLRMRRKLFDTLLL---GSPEEERLPAAHVAKEVECAMDTNSPYFSK-KEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWK 364
            S D   + DVL++L    +T   L+E+K+G TV K++KH NE I+N AK LVK WK +A +                                                  XXXXXXXXXXXX                                   +   +D V         R  +R KL + L     G PEE        A EV  A   N  Y  + K+DY  K RQL FNLKKN  LR+D+ +  V+ ++L+ M++ EL  ++K+ E+ K   +  +   LDW D N+DKINKQCGI+  +G+F CGRCKSTKT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:   19 STDAGEVLDVLRTLEKTTITYGILKETKLGHTVGKMRKHENEKIANQAKLLVKSWKSMALSPKPATASSSTPTLERKSSGTSSFDGDRIPKKSVNSTSSSSNGAKPAAATPXXXXXXXXXXXXASRGPF-----------------------------IPAGLDKV---------RATVRTKLKEILQATEGGDPEE-----IATAIEVSMARMFNMGYPGENKKDYTAKFRQLSFNLKKNTPLREDLLQDAVSAEQLINMSADELATEEKRNEILKLRDDAFQRARLDWADANEDKINKQCGIENAKGLFTCGRCKSTKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 324          
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Match: A0A5D6XF33_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF33_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.680e-38
Identity = 130/346 (37.57%), Postives = 171/346 (49.42%), Query Frame = 0
Query:   28 DVLKSLGNVDVTLAALRESKVGATVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSVSVEVDSVLADDRLAPS-----RLRMRRKLFDTLLL---GSPEEERLPAAHVAKEVECAMDTNSPYFSK-KEDYLGKARQLVFNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCGNCKNRWK 364
            DVL+ L    +T A L+E+K+G TV K++KH NE ++N AK LVK WK +A +                           XXXXXXXXXXXXXXXXX                                                     V+       +     P      R  +R KL +TL +   GS E+       VA EV  A   N  Y  + K++Y  K RQL FNLKKN  LR+D+ +  V+ ++L+ M++ EL  ++K+ E+ K   +  +   LDW D N+DKINKQCGI+  +G+F CGRCKS+KT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:   27 DVLRKLETSTITYAILKETKLGHTVGKMRKHANEKLANQAKVLVKSWKNMALSPKPSASASEGGERIPKKSSSVSSTPPAXXXXXXXXXXXXXXXXXVKPQPQPV---------------------------------------------VAAPAPRARSKGPFIPPGFDKMRATVRTKLKETLAVSDGGSAEDTA-----VAIEVAMARMFNMGYPGENKKEYTAKFRQLSFNLKKNAPLREDLLQDAVSAEQLIAMSADELATEEKRLEVQKLRDDAFQKARLDWADANEDKINKQCGIENAKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 322          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig108.1055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZL7_ECTSI6.300e-13369.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CH25_9STRA2.660e-5542.86Transcription factor S-II-domain-containing protei... [more]
A0A7S2XYD9_9STRA5.080e-4737.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CMA4_PYTOL3.480e-4038.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4G1Y0_9STRA2.980e-3931.32Transcription elongation factor S-II n=3 Tax=Aphan... [more]
A0A7S2ETU1_9STRA3.860e-3933.79Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0XKL3_9STRA5.670e-3938.12Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S2PF17_9STRA9.830e-3941.53Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K3WZ99_GLOUD1.010e-3836.68Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XF33_9STRA3.680e-3837.57Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001222Zinc finger, TFIIS-typeSMARTSM00440Cys4_2coord: 326..365
e-value: 6.3E-18
score: 75.6
IPR001222Zinc finger, TFIIS-typePFAMPF01096TFIIS_Ccoord: 326..364
e-value: 1.4E-17
score: 63.3
IPR001222Zinc finger, TFIIS-typePROSITEPS51133ZF_TFIIS_2coord: 324..364
score: 13.711
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeSMARTSM00509TFS2_5coord: 7..80
e-value: 5.5E-10
score: 49.2
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10coord: 1..89
e-value: 3.8E-19
score: 70.2
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILY47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 10..87
IPR003618Transcription elongation factor S-II, central domainPFAMPF07500TFIIS_Mcoord: 194..297
e-value: 4.0E-15
score: 56.3
IPR003618Transcription elongation factor S-II, central domainPROSITEPS51321TFIIS_CENTRALcoord: 194..309
score: 17.356
NoneNo IPR availableGENE3D2.20.25.10coord: 319..366
e-value: 6.9E-22
score: 78.8
NoneNo IPR availablePANTHERPTHR11477TRANSCRIPTION ELONGATION FACTOR S-IIcoord: 10..366
NoneNo IPR availablePANTHERPTHR11477:SF3TRANSCRIPTION ELONGATION FACTOR A PROTEIN 2coord: 10..366
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 325..364
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 28..77
e-value: 1.9E-10
score: 40.6
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 1..81
score: 18.624
IPR035100Transcription elongation factor, IIS-typePIRSFPIRSF006704TFIIScoord: 1..366
e-value: 5.4E-61
score: 204.7
IPR036575Transcription elongation factor S-II, central domain superfamilyGENE3D1.10.472.30coord: 190..294
e-value: 4.9E-12
score: 48.1
IPR036575Transcription elongation factor S-II, central domain superfamilySUPERFAMILY46942Elongation factor TFIIS domain 2coord: 191..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig108contigC-linearis_contig108:5168..21829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig108.1055.1mRNA_C-linearis_contig108.1055.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig108 4263..21918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig108.1055.1 ID=prot_C-linearis_contig108.1055.1|Name=mRNA_C-linearis_contig108.1055.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=367bp
MDAAVETGNLRRHLEKALSSEDVERMDDVLKSLGNVDVTLAALRESKVGA
TVSKLKKHGNEGISNSAKALVKKWKKIAEAEGAQGGGAAGASAATPGKSD
KPRKSSSGSTGKGPGPSAASKGSEGGTSSNGAAAMASSSSSSSSLSSPAS
SAGKGASAAAAAPLSRQSSASSTSDLSVSVEVDSVLADDRLAPSRLRMRR
KLFDTLLLGSPEEERLPAAHVAKEVECAMDTNSPYFSKKEDYLGKARQLV
FNLKKNDQLRQDVREGLVAPQRLVVMTSTELMRKDKKEEMDKAVSERTEA
RMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPM
TTFVTCGNCKNRWKFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001222Znf_TFIIS
IPR003617TFIIS/CRSP70_N_sub
IPR035441TFIIS/LEDGF_dom_sf
IPR003618TFIIS_cen_dom
IPR017923TFIIS_N
IPR035100TF_IIS-typ
IPR036575TFIIS_cen_dom_sf