prot_C-linearis_contig107.1052.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig107.1052.1
Unique Nameprot_C-linearis_contig107.1052.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length509
Homology
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: A0A6H5KK34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK34_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 1.410e-102
Identity = 216/489 (44.17%), Postives = 271/489 (55.42%), Query Frame = 0
Query:   38 FKCPKNVLRQRTGGCGAFNLESDQMCSECDHRLWESIELKGA---PVRLRLGDGVTFKEPPHLGHRG--EEIVQEGYIHSFELKVDALSSDEERRETKARCAYKKHRGYLSAGIALSDLTLVPQQPQHGSSEPGGAGNSSGANGAVGKEKQRKGSSFSAFAGKG-----------SSSAGA--------------AAISDQSVQSWGQGRCEHVAAGEECNHKNGKCLSCHKASKRAGGKSGSENDVDGGDDPMKPEVEETQKNGLDDSTTRCETAGCNNGHHQLGVCRSCFARHRERVAKIVT----ERKLQRKHLPPCRACEGRLSESSHAEGMRDANKA----EGVSVD-LDESTTGSCSLCGTMGGKGYGDQLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRCVKNKNKEKSEIGCTACHSPFEDEKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGD--WFCPRCAHGGRSVSCSSS 485
            FKCPK     R+ GCGA N ES Q C +C+ RLW  ++  G    PVR R+ D V + E P++   G  E   Q GY++S E        +++ R+ +A C Y+   GYLSA I L DL LVP  P+      G    SSG              S S  +G             +SS G                +    +VQSWG+G+CEHV AG E N+KNGKC  CH+A     GK GS      G DPM+ E        ++D + +CET GC++G + LGVC +CF RHRER+A I T    +R+LQ K+ PPCRACEG LSE+ HAE +R AN      E  SVD LD S TG CS CG +GGKG  +QLL+CDG GC  A HM+CL+P L +VPR LW+C+ CV +KN E S  GC AC S  +DEK+L CDGPG + +     YH  CLPVPL   P G   WFCPRCAHG +  S SSS
Sbjct:  568 FKCPK-----RSRGCGAINTESSQRCCKCNVRLWTLVKPNGGTGPPVRFRVDDLVRWWELPYMAVPGKDERKKQVGYVYSLE------DHNDDGRDMEAFCTYRYQPGYLSAAINLKDLELVPTPPR--GERAGSRSASSGXXXXXXXXXXXXXXSDSVGSGXXXXXXXXXXXXXNSSTGXXXXXXXXXXXXXXXGSRPSVTVQSWGRGKCEHVEAGNEVNYKNGKCHYCHEA-----GKGGS------GSDPMEEEKR------VEDKSVKCETPGCDSGQYALGVCCACFDRHRERIAAIRTAAKKKRQLQEKNPPPCRACEGLLSETQHAECVRTANGTYSGDENASVDSLDNSDTGRCSECGIIGGKGRDNQLLLCDGNGCPIATHMKCLDPPLNEVPRWLWYCNACVLDKNAELSVRGCNACGSTDDDEKILLCDGPGCNST----PYHYDCLPVPLKGLPLGTDPWFCPRCAHGKKPSSVSSS 1022          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: A0A7S4SVR0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SVR0_9DINO)

HSP 1 Score: 102 bits (254), Expect = 2.850e-19
Identity = 46/107 (42.99%), Postives = 60/107 (56.07%), Query Frame = 0
Query:  374 QLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRCVKNKNK----EKSEIGCTACHSPFEDEKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRCAHG 476
            +LL+CDG GC+ ACH+RC +P L +VP G WFCD C    ++    +   + C  C    ++ +LL CDGPG     C    HLGC   PL   P G+WFC RC  G
Sbjct:  585 KLLLCDGFGCTRACHLRCCKPPLREVPVGDWFCDLCKLRGDRGGQAQLRAVVCMVCGGSSDEAELLLCDGPG-----CSRACHLGCCDPPLQRVPAGEWFCARCQAG 686          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: A0A7S0FD44_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FD44_9DINO)

HSP 1 Score: 97.1 bits (240), Expect = 1.480e-17
Identity = 48/120 (40.00%), Postives = 63/120 (52.50%), Query Frame = 0
Query:  355 STTGSCSLCGTMGGKGYGDQLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRC-VKNKNKEKSEIGCTACHSPFEDEKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRC 473
            S+  +C +CG   G+     LL+CDG GC+ ACH+ C  P L +VP G WFC  C    +   K EI C  C S  ++ +LL CDG  +D   C    HL C   PL   P G+W+C  C
Sbjct:  545 SSDAACMVCGRRDGEAT---LLLCDGPGCTRACHLECCRPPLREVPVGDWFCSHCQASGRRDSKVEIICMICGSSDDEAELLLCDG--LD---CTRACHLRCCKPPLERVPAGEWYCAHC 656          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: C5LAN0_PERM5 (PHD-type domain-containing protein (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LAN0_PERM5)

HSP 1 Score: 82.0 bits (201), Expect = 5.830e-14
Identity = 43/118 (36.44%), Postives = 57/118 (48.31%), Query Frame = 0
Query:  372 GDQLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRCVKNKNKEKS----------EIGCTACHSPFEDE--KLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRCAHGG 477
            GD++L+CDG GCSNA H+RC  P L  VP   W+C  C   ++   S          ++ C  CH  + DE  +++ C     +  GC    HL C    L   P GDWFC   A GG
Sbjct:   26 GDEILLCDGPGCSNAYHLRCTRPILQSVPTTTWYCPSCTSEQSNTISVTEEEPSDDMDVACEECHIRWWDEGNEIILC--ARYESHGCRVGCHLKCHRPKLIEIPKGDWFCAEHAPGG 141          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: UPI001D08830B (bromodomain adjacent to zinc finger domain protein 2B isoform X1 n=12 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D08830B)

HSP 1 Score: 81.3 bits (199), Expect = 2.480e-12
Identity = 39/101 (38.61%), Postives = 48/101 (47.52%), Query Frame = 0
Query:  373 DQLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRCVKNKNKEKSEIGCTACHSPFEDEKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRC 473
            D+LL+CDG  C    H  C +PK+ Q+P G W+C  C   +NK   E  C  C       KL+ CD        C   YH  CL  PL   P G W+CP C
Sbjct: 2271 DKLLLCDG--CDKGYHTYCFKPKMEQIPDGDWYCFEC---RNKATGERNCIVCGKKQSSTKLVICDM-------CPRAYHQDCLQPPLTKVPRGKWYCPTC 2359          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: A0A7S0HWW5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HWW5_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 2.370e-11
Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:  416 EKSEIGCTAC-HSPFED-EKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRC 473
            ++ +  C AC H+ +    ++L CDGPG+DG GCE  YHLGCL  PL   P+G+W CP C
Sbjct:   44 QEEDDTCAACWHAAWAPGNEILLCDGPGVDGDGCEKAYHLGCLRPPLKLVPEGEWLCPSC 103          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: UPI001D05C48F (bromodomain adjacent to zinc finger domain protein 2B isoform X1 n=3 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D05C48F)

HSP 1 Score: 73.9 bits (180), Expect = 4.740e-10
Identity = 40/121 (33.06%), Postives = 53/121 (43.80%), Query Frame = 0
Query:  355 STTGSCSLCGTMGGKGYGDQLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRCVKNKNKEKSEIGCTAC--HSPFEDEKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRC 473
            S   +C  C +   +   D+LL+CDG  C    H  C +PK+  +P G W+C  C+   NK   E  C  C         KL+ CD        C   YHL CL  P+   P G W+C  C
Sbjct: 1841 SKLSNCQFCHSGDNE---DKLLLCDG--CDRGYHTYCFKPKMENIPEGDWYCHECM---NKATGERNCIVCGKKQATTGTKLVLCDL-------CPRAYHLDCLQPPITKIPRGKWYCLNC 1946          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: UPI001F4F8CC7 (bromodomain adjacent to zinc finger domain protein 2B-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F8CC7)

HSP 1 Score: 73.6 bits (179), Expect = 6.430e-10
Identity = 37/101 (36.63%), Postives = 46/101 (45.54%), Query Frame = 0
Query:  373 DQLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRCVKNKNKEKSEIGCTACHSPFEDEKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRC 473
            D+LL+CDG  C    H  C +PK+  +P G W+C  C+   NK   E  C  C      + L+ CD        C   YH  CL   L   P G WFCP C
Sbjct: 2279 DKLLLCDG--CDKGYHTYCFKPKMENIPEGDWYCFECM---NKATGERNCIVCGKKT-GKNLVLCDV-------CPRAYHTDCLQPVLSKVPRGKWFCPTC 2366          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: UPI001E276B9C (bromodomain adjacent to zinc finger domain protein 2B isoform X1 n=5 Tax=Coccinellini TaxID=263631 RepID=UPI001E276B9C)

HSP 1 Score: 72.8 bits (177), Expect = 1.090e-9
Identity = 39/121 (32.23%), Postives = 52/121 (42.98%), Query Frame = 0
Query:  355 STTGSCSLCGTMGGKGYGDQLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRCVKNKNKEKSEIGCTAC--HSPFEDEKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRC 473
            S   +C  C +   +   D+LL+CDG  C    H  C +P +  +P G W+C  C+   NK   E  C  C         KL+ CD        C   YHL CL  P+   P G W+C  C
Sbjct: 1863 SKLSNCQFCHSGDNE---DKLLLCDG--CDRGYHTYCFKPMMENIPEGDWYCHECM---NKATGERNCIVCGKKQAISGTKLVLCDL-------CPRAYHLDCLQPPITKIPRGKWYCLNC 1968          
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Match: A0A7F5R6T7_AGRPL (bromodomain adjacent to zinc finger domain protein 1A n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A7F5R6T7_AGRPL)

HSP 1 Score: 70.9 bits (172), Expect = 4.020e-9
Identity = 42/135 (31.11%), Postives = 55/135 (40.74%), Query Frame = 0
Query:  373 DQLLMCDGLGCSNACHMRCLEPKLTQVPRGLWFCDRCVKNKNKEKSEIG----------------------------------CTACHSPFEDEKLLYCDGPGIDGSGCEALYHLGCLPVPLGSQPDGDWFCPRC 473
            + +L+CD   C+   H+ CL+PKL  VP+G WFC++C + K KE+                                      C  C S  E   LL CD        C  +YHL C+  PL   P G WFC RC
Sbjct: 1048 ENMLLCDN--CNLGHHLYCLKPKLNSVPQGDWFCEKCSREKEKERXXXXXXXXXXXXXILFREALDEEDEEEFVILGHAIIEVCQTCKSGGE---LLCCDN-------CPDMYHLECVAPPLRRVPRGQWFCRRC 1170          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK34_9PHAE1.410e-10244.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4SVR0_9DINO2.850e-1942.99Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S0FD44_9DINO1.480e-1740.00Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
C5LAN0_PERM55.830e-1436.44PHD-type domain-containing protein (Fragment) n=1 ... [more]
UPI001D08830B2.480e-1238.61bromodomain adjacent to zinc finger domain protein... [more]
A0A7S0HWW5_9EUKA2.370e-1148.33Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
UPI001D05C48F4.740e-1033.06bromodomain adjacent to zinc finger domain protein... [more]
UPI001F4F8CC76.430e-1036.63bromodomain adjacent to zinc finger domain protein... [more]
UPI001E276B9C1.090e-932.23bromodomain adjacent to zinc finger domain protein... [more]
A0A7F5R6T7_AGRPL4.020e-931.11bromodomain adjacent to zinc finger domain protein... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 359..410
e-value: 1.9E-9
score: 47.4
coord: 421..474
e-value: 2.0E-5
score: 34.0
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 422..474
e-value: 1.8E-7
score: 30.9
coord: 360..410
e-value: 8.6E-9
score: 35.2
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 419..476
score: 9.098
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 357..412
score: 9.641
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 293..417
e-value: 3.1E-15
score: 58.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 418..489
e-value: 2.9E-13
score: 51.2
NoneNo IPR availablePANTHERPTHR45915:SF2TOUTATIS, ISOFORM Ecoord: 359..422
NoneNo IPR availablePANTHERPTHR45915FAMILY NOT NAMEDcoord: 422..478
coord: 359..422
NoneNo IPR availablePANTHERPTHR45915:SF2TOUTATIS, ISOFORM Ecoord: 422..478
IPR011031Multihaem cytochromePROSITEPS51008MULTIHEME_CYTCcoord: 229..243
score: 6.576
IPR011031Multihaem cytochromePROSITEPS51008MULTIHEME_CYTCcoord: 417..431
score: 6.969
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 417..476
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 351..416

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:439353..444835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1052.1mRNA_C-linearis_contig107.1052.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig107 439352..444835 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig107.1052.1 ID=prot_C-linearis_contig107.1052.1|Name=mRNA_C-linearis_contig107.1052.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=509bp
GRGAGPAKQHRKAKAEDKKGKGKARDVPTGGGGGPGMFKCPKNVLRQRTG
GCGAFNLESDQMCSECDHRLWESIELKGAPVRLRLGDGVTFKEPPHLGHR
GEEIVQEGYIHSFELKVDALSSDEERRETKARCAYKKHRGYLSAGIALSD
LTLVPQQPQHGSSEPGGAGNSSGANGAVGKEKQRKGSSFSAFAGKGSSSA
GAAAISDQSVQSWGQGRCEHVAAGEECNHKNGKCLSCHKASKRAGGKSGS
ENDVDGGDDPMKPEVEETQKNGLDDSTTRCETAGCNNGHHQLGVCRSCFA
RHRERVAKIVTERKLQRKHLPPCRACEGRLSESSHAEGMRDANKAEGVSV
DLDESTTGSCSLCGTMGGKGYGDQLLMCDGLGCSNACHMRCLEPKLTQVP
RGLWFCDRCVKNKNKEKSEIGCTACHSPFEDEKLLYCDGPGIDGSGCEAL
YHLGCLPVPLGSQPDGDWFCPRCAHGGRSVSCSSSSRGGIAARDGGTSDS
GTSDSDDGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR011031Multihaem_cyt
IPR011011Znf_FYVE_PHD