prot_C-linearis_contig107.1050.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig107.1050.1
Unique Nameprot_C-linearis_contig107.1050.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length253
Homology
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 4.240e-111
Identity = 176/199 (88.44%), Postives = 180/199 (90.45%), Query Frame = 0
Query:   57 STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLMEKDGEQPAAEA----PAPAAEEEADPSTDAAADALQNLSVGKTEEEAAPGE 251
            STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEE+TFALR GNSDSANEFKEQFTAAQK+VEGLM  +  +PAAEA    PA      ADPSTDAAADALQNLSVG   EEAAP E
Sbjct:   49 STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFKEQFTAAQKVVEGLMAGEAPEPAAEAEETAPATXXXAAADPSTDAAADALQNLSVGTGAEEAAPAE 247          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: A0A7S2XZR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR9_9STRA)

HSP 1 Score: 217 bits (553), Expect = 5.570e-67
Identity = 104/149 (69.80%), Postives = 123/149 (82.55%), Query Frame = 0
Query:   56 ESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLM 204
            ESTA FEPVVQL+E+EVKTHEE+EEVLWK R KLF+FGETLLNKGTGQK W ERGIGE KFL+HK ++ +R LMRQE+TMKVICNHV DPRI ++ NAGSDRSWVW+AFDF++G+L E  FA+R  NSD A +FK+QF   Q  +  LM
Sbjct:   68 ESTAHFEPVVQLDEIEVKTHEEEEEVLWKWRGKLFVFGETLLNKGTGQKTWNERGIGEFKFLKHKEHQKIRALMRQERTMKVICNHVVDPRIQMQMNAGSDRSWVWSAFDFSDGELVETVFAIRFANSDIAQDFKKQFDTHQATMASLM 216          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.170e-66
Identity = 112/187 (59.89%), Postives = 140/187 (74.87%), Query Frame = 0
Query:   54 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLMEKDGEQPAAEAPAPAAEEEADPSTDAAADALQNLSV 240
            E E T  FEPVVQL+EVEVKTHEEDE+VL+KMRAKLF+FGETLLNKG+G K W ERG+GEVKFL+H+ +  +R+LMRQEKTMK+I NHVADPRIVLKPN GSDRSWVW A+DF + +L E  FA+R G+SD+ANEFKE+F   +K +  ++  +  + A          E D     AA+A+ +LSV
Sbjct:   42 EAECTTVFEPVVQLDEVEVKTHEEDEQVLYKMRAKLFVFGETLLNKGSGTKTWNERGVGEVKFLKHREHEKIRLLMRQEKTMKIIANHVADPRIVLKPNLGSDRSWVWTAYDFVDNELVETVFAIRFGSSDAANEFKEKFEEVKKDMARIIAGEDAEGA----------EGDAQAQEAAEAIASLSV 218          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.800e-65
Identity = 104/154 (67.53%), Postives = 128/154 (83.12%), Query Frame = 0
Query:   55 EESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLMEKDG 208
            +ESTA+F PVVQL+EVEVKTHEEDE+V +K+RAKLF F ETLLNKG+G+KEW+ERG+GEVK L+H+ N  VRVLMRQEKTMK+ICNHV DPRI L+PN GSDRSWVW+A+DF+ G+LE+  FA+R GNSD A E+K  F  A+  ++ L  KDG
Sbjct:   93 QESTAEFTPVVQLDEVEVKTHEEDEDVDFKIRAKLFRFSETLLNKGSGKKEWIERGVGEVKILKHRENSMVRVLMRQEKTMKIICNHVVDPRIELEPNVGSDRSWVWSAWDFSSGELEDTIFAIRFGNSDGAKEYKAAFEKAKSHMKAL--KDG 244          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: A0A6S8ZTG3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZTG3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.800e-63
Identity = 100/151 (66.23%), Postives = 125/151 (82.78%), Query Frame = 0
Query:   54 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLM 204
            EEESTA F+PVV+LEEVEVK+ EEDEEV++ MRAKLF+FGETLL+KGTG K W ERGIGE + L+H+ ++ +R LMRQEKTMKVI NH  DPRI L+PNAGSDRSWVW+AFDF++G+LEE  FALR  +S+ AN+FK +F   QK +E ++
Sbjct:   26 EEESTATFKPVVELEEVEVKSGEEDEEVVFSMRAKLFLFGETLLDKGTGNKSWRERGIGEARILRHREHQRLRFLMRQEKTMKVIANHAVDPRIKLEPNAGSDRSWVWSAFDFSDGELEETVFALRFADSEIANDFKTKFLECQKEMEAIL 176          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: A0A1Z5JPA6_FISSO (Ran-binding protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPA6_FISSO)

HSP 1 Score: 204 bits (520), Expect = 8.500e-63
Identity = 120/217 (55.30%), Postives = 155/217 (71.43%), Query Frame = 0
Query:   31 PETAPAETVDQATGGDAAGATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLME-KDGEQPAAEAPAPAAEEEADPSTDAAADALQNLSVGKTEEE 246
            P+TAPAE  ++   GD     A EEESTA FEPVV+LEEV+VK+ EE+EEVL+  R+KLFI+GETLL++GTG K W ERGIGEV+ L+H+ ++ +R+LMRQEKTMKVI NHV DP+I L+PN GSDRSWVW+AFDF EG+L+E  FA+R G+SD ANEF+++F   Q  +E L+  KD E             +A+   D AA AL  LS  + +EE
Sbjct:    7 PKTAPAEGEEEE--GD--DVPAKEEESTATFEPVVKLEEVDVKSGEEEEEVLYTKRSKLFIYGETLLDQGTGNKTWRERGIGEVRLLKHREHQKIRLLMRQEKTMKVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEFRDKFLECQSEMEKLLGGKDAE-------------DAEGVADEAAAALAGLSTSEEKEE 206          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: K0TLK1_THAOC (RanBD1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLK1_THAOC)

HSP 1 Score: 204 bits (519), Expect = 1.200e-62
Identity = 102/155 (65.81%), Postives = 124/155 (80.00%), Query Frame = 0
Query:   50 ATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLM 204
            A APEEESTA FEPVV+L+EVEVK+ EE+EE L   R+KLFI+GETLL+KGTG+K W ERGIGE + L+H+ ++ +R LMRQEKTMKVI NH  DPRI L+PNAGSDRSWVW+ +DF EG+LEE   ALR  NSD ANEFKE++   QK +E L+
Sbjct:   29 AEAPEEESTATFEPVVKLDEVEVKSGEEEEETLCTYRSKLFIYGETLLDKGTGKKTWKERGIGEARILRHREHQRLRFLMRQEKTMKVIANHALDPRIKLEPNAGSDRSWVWSCYDFAEGELEEKVLALRFANSDLANEFKEKYEECQKEMEALL 183          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: A0A7S2EXM6_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S2EXM6_TRICV)

HSP 1 Score: 203 bits (516), Expect = 2.920e-62
Identity = 100/151 (66.23%), Postives = 126/151 (83.44%), Query Frame = 0
Query:   54 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLM 204
            EEESTA FEPVV+L+EVEV++ EEDEEV++ +R+KLFI+GETLL+KGTG+K W ERGIGE K L+H+ ++ +R+LMRQEKTMKVI NH  DPRI L+PNAGSDRSWVW+AFDF EG+L E  FALR  +SD AN+FK +FT +Q  +E L+
Sbjct:   22 EEESTATFEPVVKLDEVEVQSGEEDEEVVFGVRSKLFIYGETLLDKGTGKKTWRERGIGEAKILRHREHQRLRILMRQEKTMKVIANHAIDPRIKLEPNAGSDRSWVWSAFDFAEGELVETVFALRFADSDIANDFKTKFTESQSEMEKLL 172          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: B7FP98_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP98_PHATC)

HSP 1 Score: 203 bits (517), Expect = 3.210e-62
Identity = 121/221 (54.75%), Postives = 150/221 (67.87%), Query Frame = 0
Query:   31 PETAPAETVDQATGGDAAGATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLMEKDGEQPAAEAPAPAAEEEADPSTDAAADALQNLSVGKTEEEAAPGE 251
            P  +PAE V+   GG+      PEEESTA FE VV+LEEVEVK+ EE+EEVL+  R+KLFIFGETLL+KGTG K W ERGIG+++ L+H+ ++ +RVLMRQEKTMKVI NH  DPR VLKPNAG+DRSWVW+AFDF  G+L E  FA+R G+SD A EFK  F   Q  ++ L+  +GE    E    AA+E        AA+AL  LS    E+   P E
Sbjct:   12 PNESPAEVVETKEGGE----NVPEEESTATFEAVVKLEEVEVKSGEEEEEVLFSQRSKLFIFGETLLDKGTGTKSWRERGIGDIRILRHREHQRIRVLMRQEKTMKVIANHALDPRCVLKPNAGNDRSWVWSAFDFAGGELVETVFAIRFGDSDKALEFKAAFEKYQGEMQALL--NGEDKPGEDGGKAADE--------AAEALAGLSTKGEEKAEEPSE 218          
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Match: A0A7S0C0M0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0M0_9STRA)

HSP 1 Score: 201 bits (511), Expect = 2.150e-61
Identity = 100/155 (64.52%), Postives = 123/155 (79.35%), Query Frame = 0
Query:   50 ATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMVEGLM 204
            A+ PEEESTA FEPVV+LEEVE K+ EEDEE+L  MR KLF++GETLL+KGTG+K W ERGIGE++ L+H+ ++ +RVLMRQEKTMK+I NHV DPRI L+ NAGSDRSWVW+AFDF EG+L E  FA R  +SD A  FK +F   QK +E L+
Sbjct:   31 ASTPEEESTATFEPVVRLEEVETKSGEEDEEILHGMRCKLFVYGETLLDKGTGKKSWRERGIGEIRLLKHREHQRIRVLMRQEKTMKIIVNHVLDPRIKLEANAGSDRSWVWSAFDFAEGELTETVFAARFADSDIAGTFKAKFEECQKDMEKLL 185          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI29_9PHAE4.240e-11188.44RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2XZR9_9STRA5.570e-6769.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YXP9_9STRA1.170e-6659.89RanBP1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A8J2T1Z3_9STRA2.800e-6567.53Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6S8ZTG3_9STRA2.800e-6366.23Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1Z5JPA6_FISSO8.500e-6355.30Ran-binding protein 1 n=1 Tax=Fistulifera solaris ... [more]
K0TLK1_THAOC1.200e-6265.81RanBD1 domain-containing protein n=1 Tax=Thalassio... [more]
A0A7S2EXM6_TRICV2.920e-6266.23Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
B7FP98_PHATC3.210e-6254.75Predicted protein n=4 Tax=Phaeodactylum tricornutu... [more]
A0A7S0C0M0_9STRA2.150e-6164.52Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..206
NoneNo IPR availablePANTHERPTHR23138:SF94RAN-SPECIFIC GTPASE-ACTIVATING PROTEINcoord: 11..247
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 11..247
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 59..201
IPR000156Ran binding domainSMARTSM00160ranbd_3coord: 61..196
e-value: 1.7E-30
score: 117.3
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 71..198
e-value: 4.7E-37
score: 127.0
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 60..202
score: 33.485
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 45..210
e-value: 2.6E-45
score: 155.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:422458..429900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1050.1mRNA_C-linearis_contig107.1050.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig107 422360..432492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig107.1050.1 ID=prot_C-linearis_contig107.1050.1|Name=mRNA_C-linearis_contig107.1050.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=253bp
MSDFAQLAAKAKEEKVAAAAAGASSTSDAAPETAPAETVDQATGGDAAGA
TAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKG
TGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLK
PNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEQFTAAQKMV
EGLMEKDGEQPAAEAPAPAAEEEADPSTDAAADALQNLSVGKTEEEAAPG
ES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf