prot_C-linearis_contig106.983.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.983.1
Unique Nameprot_C-linearis_contig106.983.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length344
Homology
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: D7FSR0_ECTSI (DNL-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR0_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 7.020e-80
Identity = 127/168 (75.60%), Postives = 139/168 (82.74%), Query Frame = 0
Query:  176 MMPEEDRQPIGAGSPGGGEGGEENVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELNLVDIVGKTTKQREQPSSXXXXSPERGGDGTDSPQGQGSSETSK 343
            MMPEEDR P+GAGS   G   + NVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYE+GVV+ARCPGCHN+HL+ADRLGWFEEAGDGA GWDI+KITNRIGESDCHVVNEDNVMELNLVDI GKTT++++ P         +GGD  DS     SSE  K
Sbjct:    1 MMPEEDRVPVGAGSTAQGSEDKPNVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLGWFEEAGDGADGWDIEKITNRIGESDCHVVNEDNVMELNLVDIAGKTTRRKDTPP--------KGGDDRDSSPESPSSEGQK 160          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: A0A6H5JD28_9PHAE (DNL-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD28_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 8.430e-80
Identity = 127/162 (78.40%), Postives = 139/162 (85.80%), Query Frame = 0
Query:  173 EREMMPEEDRQPIGAGSPGGGEGGEENVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELNLVDIVGKTTKQREQPSSXXXXSPERGGDGTDSPQ 334
            EREMMPEEDR P+GAGS   G   + NVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYE+GVV+ARCPGCHN+HL+ADRLGWFEEAGDGA GWDI+KITNRIGESDCHVVNEDNVMELNLVDI GKTT++++ P       P RG D   SP+
Sbjct:  163 EREMMPEEDRVPVGAGSTAQGSEDKPNVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLGWFEEAGDGADGWDIEKITNRIGESDCHVVNEDNVMELNLVDIAGKTTRRKDTP-------PTRGDDRDSSPE 317          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: A0A7S2LH97_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LH97_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.200e-31
Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 0
Query:  203 FLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGA-GGWDIQK-ITNRIGESDCHVVNEDNVMELNLVDIVGK 307
            F DVPG++ T+++ + I++TCTVC TR+AK F + +Y  GVV+ RCPGC NLHL+ADRLGWFE+  +   GGWDI+K I  + GE++   V  DNV+EL L DIVGK
Sbjct:   96 FTDVPGTKNTKQKTLAIIYTCTVCNTRSAKQFTEHAYRHGVVLVRCPGCQNLHLIADRLGWFEDMDEKIEGGWDIEKAILTKTGENNVTAVTNDNVLELTLEDIVGK 202          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: A0A835YZV4_9STRA (DNL zinc finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZV4_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.240e-29
Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
Query:  203 FLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQ-KITNRIGESDCHVVNEDNVMELNLVDIVG 306
            F DVPG+      KM +++TC VCETR AK F+KL+YE+GVV+ RCPGC+NLHLVADRLGWF++ G     WDI+ ++ +R    +C VV  +N+ME+ L DI G
Sbjct:   67 FKDVPGATHAPGGKMVMIYTCKVCETRAAKGFSKLAYEQGVVLVRCPGCNNLHLVADRLGWFDDEG-----WDIESRVMSRTEGGNCSVVTHENIMEITLEDIQG 166          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: A0A7S1ZZB8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZB8_TRICV)

HSP 1 Score: 117 bits (293), Expect = 4.440e-28
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 0
Query:  201 VRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELNLVDIVGK 307
            +   D+PG+E T  +K+ IV+TC +C TR+AK F + +Y  GVV+ RCPGC NLHL+ADRLG+FE+  DG  GWDIQK   ++GE+    VN+DNV+EL L D+ GK
Sbjct:   64 LHLSDIPGAE-TGGKKLAIVYTCKLCNTRSAKKFTEQAYNHGVVMVRCPGCENLHLIADRLGFFEDRADG--GWDIQKALAKMGEN-VRAVNDDNVLELTLEDVWGK 166          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: A0A6G0WW39_9STRA (DNL-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW39_9STRA)

HSP 1 Score: 110 bits (276), Expect = 6.160e-26
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 0
Query:  205 DVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELNLVDIVGKTTK 310
            DVPG+  T+ EK  +++TCTVC+TR AKT +K +Y  GVV+ RCP C NLHLVADRLGWFE+     GG+DIQ I    GE+   VV  D+++EL   DI+G+  +
Sbjct:   52 DVPGATLTKGEKFVMLYTCTVCDTRAAKTISKHAYYHGVVLIRCPTCQNLHLVADRLGWFED-----GGYDIQTILAEKGEN-ARVVTHDDILELTEADILGQAAE 151          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: W4GQX1_9STRA (DNL-type domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQX1_9STRA)

HSP 1 Score: 106 bits (265), Expect = 6.320e-24
Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 0
Query:  205 DVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELNLVDIVG 306
            D+PG+  T  +K  +V+TCTVC+TR AKT +K +Y  GVV+ RCP C NLHL+ADRLGWFE+     GG+D+Q++    G  +  +V  DN++EL   D++G
Sbjct:   80 DIPGATLTSGDKFVMVYTCTVCDTRAAKTISKHAYYNGVVLIRCPTCQNLHLIADRLGWFED-----GGYDVQEVLAAKG-GNARIVTHDNILELTEADVLG 175          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: A0A485LB80_9STRA (Aste57867_18627 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB80_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.120e-23
Identity = 50/101 (49.50%), Postives = 69/101 (68.32%), Query Frame = 0
Query:  206 VPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELNLVDIVG 306
            VPG+  T  EK  +V+TCTVC+TR AKT +K +Y  GVV+ RCP C NLHL+ADRLGWFE+     GG+D+Q++    G  +  +V  DN++EL   D++G
Sbjct:   67 VPGATLTSGEKFVMVYTCTVCDTRAAKTISKHAYYNGVVLIRCPTCQNLHLIADRLGWFED-----GGYDVQEVIAAKG-GNARLVTHDNILELTEADVLG 161          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: A0A7S3HSX1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSX1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.330e-23
Identity = 60/121 (49.59%), Postives = 78/121 (64.46%), Query Frame = 0
Query:  189 SPGGG---EGGEENVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELNLVDIVG 306
            SPG G   +GGE  +  F DVPG  QT  EKM I+FTCTVC+TR+A+  +K +Y  G+V+ RC  C N HL+ADR+G FE++  G  GWDIQK     GE     + ++NV EL + DIVG
Sbjct:   52 SPGNGMSEKGGE--LPAFADVPGV-QTTGEKMIIMFTCTVCDTRSARKISKQAYNEGIVMVRCDCCKNRHLIADRMGVFEDSLAGNSGWDIQKYMAEQGEK-VRSITDENVYELTVEDIVG 168          
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Match: A0A7S4MTK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTK6_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.530e-23
Identity = 53/97 (54.64%), Postives = 72/97 (74.23%), Query Frame = 0
Query:  205 DVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPGCHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELNL 301
            D+PG+E+  + K+ IVFTCTVC TR+AK F + +Y  GVV+ RCPGC NLHL+ADRLG+F +  +  GGWDIQK   ++GE D   V++DNV+EL +
Sbjct:  191 DIPGAEKGGK-KLAIVFTCTVCSTRSAKKFTERAYTHGVVMVRCPGCENLHLIADRLGFFGDDKE-EGGWDIQKAMAKMGE-DVRAVSDDNVLELTM 284          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSR0_ECTSI7.020e-8075.60DNL-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JD28_9PHAE8.430e-8078.40DNL-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2LH97_9STRA1.200e-3155.14Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A835YZV4_9STRA4.240e-2953.33DNL zinc finger-domain-containing protein n=1 Tax=... [more]
A0A7S1ZZB8_TRICV4.440e-2853.27Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6G0WW39_9STRA6.160e-2651.89DNL-type domain-containing protein n=1 Tax=Aphanom... [more]
W4GQX1_9STRA6.320e-2448.04DNL-type domain-containing protein n=9 Tax=Aphanom... [more]
A0A485LB80_9STRA1.120e-2349.50Aste57867_18627 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3HSX1_9STRA1.330e-2349.59Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4MTK6_9STRA2.530e-2354.64Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007853Zinc finger, DNL-typePFAMPF05180zf-DNLcoord: 219..285
e-value: 8.6E-24
score: 83.3
IPR007853Zinc finger, DNL-typePROSITEPS51501ZF_DNLcoord: 212..321
score: 15.674
NoneNo IPR availablePANTHERPTHR20922:SF13DNL-TYPE ZINC FINGER PROTEINcoord: 197..312
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..35
score: 5.0
IPR024158Mitochondrial import protein TIM15PANTHERPTHR20922UNCHARACTERIZEDcoord: 197..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:256855..259599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.983.1mRNA_C-linearis_contig106.983.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 256290..259734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.983.1 ID=prot_C-linearis_contig106.983.1|Name=mRNA_C-linearis_contig106.983.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=344bp
MASRALAAAVKSNLRALRISNHPASGSTGLSFSSCCAETHRPPLPLSLLP
RRQQQRPEPHWQHRSHSATGRTAPVGLRCLSSTPAVSSEGPRPTAGCSVL
SRAARAHRCHHQTQANQPISTSTSSSNGGSGELEIEVTHVDAANAKEAAA
AAAAAAAAGDSSHGGDGDGGGGEREMMPEEDRQPIGAGSPGGGEGGEENV
VRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYERGVVIARCPG
CHNLHLVADRLGWFEEAGDGAGGWDIQKITNRIGESDCHVVNEDNVMELN
LVDIVGKTTKQREQPSSSSSSSPERGGDGTDSPQGQGSSETSK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007853Znf_DNL-typ
IPR024158Mt_import_TIM15