prot_C-linearis_contig106.973.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.973.1
Unique Nameprot_C-linearis_contig106.973.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length366
Homology
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: D7FUL4_ECTSI (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUL4_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 4.950e-102
Identity = 160/294 (54.42%), Postives = 201/294 (68.37%), Query Frame = 0
Query:    2 GSGDSMGRQVGTSTGCPNHVNWNITPNEARVNPTNTTIPAYPMFIEDGGTTTLAESPGSVGILLSGVAVFSSWAAAEAAVSYETSAFFTEGSTFDACGGHATQVGIYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLCGQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDEAFFPFVTNCYRGCCPAGMECSDHVEQCTGAESEAGYVEGDYTPVAGASLAEQYDVGFLPGVDTEYVDGDVLLECGAFVGSESEGYGAGNSSGTTPSP 295
            G G +M R  GT+TGCPNHVNW I PN   V   N +IPAYPM +EDGGTT L+ + G++G++ +GV+++S+WA  +A   YE +AF+ E  T D CGGHAT  G YH+HST GCLQ+ A AV G    EHSP LGW+YDGFPIYGQLGPGGVEMK+CG  GAD+  CLDLCSGY+A +   D F YRYY SCGFDE+FFPF  NCYRGCCP G+ CSD +E C G  +  GY  GD+ PVA  SL E YD   + G D + +  D+ + C  ++G+ S    +G +S  T +P
Sbjct:   85 GEGLTMVRWTGTNTGCPNHVNWPINPNPGLVIAINESIPAYPMLLEDGGTTDLSSAAGTIGLMRNGVSMYSAWAL-DAVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQAGAVAG----EHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADSTVCLDLCSGYEASIDE-DTFTYRYYTSCGFDESFFPFTLNCYRGCCPTGVTCSDRIEAC-GDGALIGYT-GDHVPVASESLHEPYDALLISGDDEDIIGTDLTVNCTLYLGAGSVQVASGVASDDTAAP 370          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: A0A6H5KP42_9PHAE (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP42_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 6.900e-102
Identity = 155/280 (55.36%), Postives = 191/280 (68.21%), Query Frame = 0
Query:    2 GSGDSMGRQVGTSTGCPNHVNWNITPNEARVNPTNTTIPAYPMFIEDGGTTTLAESPGSVGILLSGVAVFSSWAAAEAAVSYETSAFFTEGSTFDACGGHATQVGIYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLCGQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDEAFFPFVTNCYRGCCPAGMECSDHVEQCTGAESEAGYVEGDYTPVAGASLAEQYDVGFLPGVDTEYVDGDVLLECGAFVGSESE 281
            G G +M R   T TGCPNH+NW + PN A V   N ++PAYPM I  GGTT L+ + G++G++ +GV++FS+WA  +A V YE +AF+ E  TFD CGGHAT  G YH+H T GCLQ+ A AV G    EHSP LGW+YDGFPIYGQLGPGGVEMK+CG  GA    CLDLCSGY+A +   D F YRYY SCGFDE+FFPF  NC+RGCCP G  CSD +E C G +++ GY + DY PVA  SL E YD   + G D E +     + C  ++GSESE
Sbjct:   70 GEGITMARWTATETGCPNHINWPLNPNAAGVMSVNQSVPAYPMLIASGGTTDLSSAAGTIGLMRNGVSMFSAWAV-DAVVEYEDTAFYLEADTFDPCGGHATPTGAYHYHGTAGCLQEQAGAVKG----EHSPVLGWSYDGFPIYGQLGPGGVEMKMCGADGAHDTACLDLCSGYEATIDE-DEFTYRYYTSCGFDESFFPFTLNCFRGCCPTGNTCSDRLEAC-GVDADVGYTD-DYVPVALESLDEFYDAELVLGDDLELIGSRTTVNCTLYLGSESE 341          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: A0A7S1AW44_NOCSC (Hypothetical protein (Fragment) n=3 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AW44_NOCSC)

HSP 1 Score: 159 bits (402), Expect = 6.050e-41
Identity = 98/252 (38.89%), Postives = 129/252 (51.19%), Query Frame = 0
Query:   13 TSTGCPNHVNWNITPNEARVNPTNTTIPAYPMFIEDGGTTT----------LAESPGSVGILLSGVAVFSSWAAAE--AAVSYETSAFFTEGSTFDACGGHATQVG--IYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLC----GQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDE--------------AFFPFVTNCYRGCCPAGMECS-DHVEQCTGAESE 231
            T+  CPNH  +N+ PN A    T   +PA+P F+   GTTT          L+E  G+VG+L SG  +FS +  A       Y TSA + E +TFD CGGHA+      YH+H  P CL    +   G     HSPQ+GWA DGFPIYG  GP GV M+ C    G  G D   C D C GY +   ++D F YRYYL   + +              A+ P    C+RGCCP+G+ CS   ++ CT  +S+
Sbjct:   74 TTNHCPNHPTYNLNPNYAVGESTTYRVPAFPSFV---GTTTASGTASASIDLSEQGGAVGVLFSGGKLFSPYGGAGYGQVSGYSTSAIYNEANTFDQCGGHASSSTQPSYHYHGPPPCL----LRQLGQADASHSPQVGWALDGFPIYGPRGPSGVMMQTCTVTDGTYGVDV--CTDDCGGYYSADDSIDNFVYRYYLMGNYGDGTSCDVPGCPSPTSAYHPSSPLCFRGCCPSGVSCSLSAIDTCTSDDSD 316          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: A0A7S1JAX6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JAX6_9EUGL)

HSP 1 Score: 149 bits (375), Expect = 5.300e-38
Identity = 95/244 (38.93%), Postives = 127/244 (52.05%), Query Frame = 0
Query:   10 QVGTSTGCPNHVNWNITPNEARVNPTNTTIPAYPMFIEDGGTTTLAESPGSVGILLSGVAVFSSWA--AAEAAVSYETSAFFTEGSTFDACGGHATQ--VGIYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLCGQQGADAVHCLDLCS----GYKAELPAVDGFKYRYY--------LSCG---------FDEAFFPFVTNCYRGCCPAGMECSD-HVEQCTG 227
            +V T+T CPNH   NI P +     T  T+PA P + +   T+ L    G +G++ SG  ++S +A  A  AA S+  SA + EG TFD CGGH++   V  YH+H  P CL    +   G++   HSPQ+GWA DGFP+YG  GP G  MK C Q G    +  D+C+    GY A+LP  D F +RYY        LSC           D   +P     Y GCCP+G+ CS   V  C+G
Sbjct:   54 RVITTTLCPNHPWKNINPGQPVKAQTVYTVPANPQY-DTAATSDLTSQAGLIGVMFSGAMLYSPYAGPATGAATSFTKSAPYGEGDTFDMCGGHSSSKTVASYHYHVPPSCL----LQQLGASATAHSPQVGWAADGFPVYGSRGPSGTLMKSCTQTGG--TYGTDVCTNEFGGYLADLPGTDNFTFRYYMQGSSNDGLSCTNPLSPAPATTDSTSYPQTPTKYYGCCPSGVSCSGGFVNVCSG 290          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: A0A813JEL4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JEL4_POLGL)

HSP 1 Score: 148 bits (374), Expect = 8.140e-37
Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query:   14 STGCPNHVNWNITPNEARVNPTNTTIPAYPMFIEDGGTTT-------LAESPGSVGILLSGVAVFSSWAAAE--AAVSYETSAFFTEGSTFDACGGHATQV--GIYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLC----GQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDEA--------------FFPFVTNCYRGCCPAGMECSDHVEQCTGAESEAGYVEGDYTPVA 243
            S GCPNH  + ++P++  +     TIP YP F+     +T       L+++  S+GI  +G  +FS +A        +Y TSA + +GSTFD  G H+  +  G+Y     P CL +     +GS    HSPQ+GWA+DGFPIYG  GP GV+M+ C    G  G+D   C D+C GY      +D + YRYY+   +D+               ++P    C+RGCCP+G+ CS  V  C+G+ S  GY    +TP A
Sbjct:   46 SNGCPNHPWYQLSPSKPSLQKMTYTIPLYPQFLGSSTYSTSGYPAVDLSQTVDSIGIFFNGGMLFSPYAGPTYGQVKNYATSATYAKGSTFDQRGCHSNDLSNGLYGCSVPPHCLLNQLGQTSGS----HSPQIGWAHDGFPIYGPRGPNGVQMQTCEVTGGTYGSDV--CTDVCGGYYLNDGTIDNYYYRYYIQGTYDDGTSCSNPGCTSPGANYYPNTPVCFRGCCPSGVTCSSVVPACSGSYSN-GY--SAFTPAA 295          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: R1DZX8_EMIHU (EF-hand domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZX8_EMIHU)

HSP 1 Score: 150 bits (380), Expect = 2.190e-36
Identity = 91/214 (42.52%), Postives = 117/214 (54.67%), Query Frame = 0
Query:   39 IPAYPMF----IEDG--GTTTLAESPGSVGILLSGVAVFSSWAAA----------EAAVSYETS-AFFTEGSTFDACGGHAT--QVGI-YHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLCGQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCG-----------------FDEAFFPFVTNCYRGCCPAG 215
            IPAYP F     ED     T L+E  G VG+ L+GVA++++WA +          E  V  ETS A   EG TFD CGGH++    G  YH+H  P CL    +A  G    +HSPQ+GW YDGFP+YG  GP GV+M  CGQ GA  V+CLD C+GY ++  ++D FKYRYY+S                    + +FFPF   C  GC P+G
Sbjct:  404 IPAYPFFNGASYEDALAAATDLSEQGGDVGLTLNGVAIYTAWAGSYDXXXXXXIDEDDVMSETSNAVTAEGETFDRCGGHSSGSSAGFQYHYHIPPTCL----LAQLGQYIGQHSPQVGWMYDGFPVYGPFGPDGVQMIKCGQTGAHEVYCLDACNGYYSDDESIDVFKYRYYMSGNTTDQASLRASPLPTSDPVESSFFPFTPLCSLGCKPSG 613          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: D8LCJ6_ECTSI (YHYH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ6_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 3.960e-36
Identity = 84/210 (40.00%), Postives = 105/210 (50.00%), Query Frame = 0
Query:   63 ILLSGVAVFSSWAAAEAAVSYETSAFFTEGSTFDACGGHATQVGIYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLCGQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDEAFFPFVTNCYRGCCPAGMECSDHVEQCTGAESEAGYVEG---DYTPVAGASLAEQYDVGFLPGVDTEYVDGDVL 269
            ++++GVAV+SS+A   AA +Y  +A    G T D CGG  T  G+YH+H+ PGCLQ+ AM     T  +HSP LGWAYDGFPIYGQLGP GVEM                                   L+CG    +FPF  NCYRGCC     C   V+ C     E G V G   D+T  AG S    Y       +DT Y+D D++
Sbjct:    1 MMINGVAVYSSYADDRAATTYGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQAMKAQNLTADDHSPLLGWAYDGFPIYGQLGPSGVEM-----------------------------------LTCGSGPEYFPFTINCYRGCCEETTRCHSTVQNCI---EELGAVIGYTDDFT--AGQSYESLY-------LDTPYMDSDLI 163          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: A0A813J4D8_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J4D8_POLGL)

HSP 1 Score: 144 bits (362), Expect = 5.750e-36
Identity = 92/259 (35.52%), Postives = 134/259 (51.74%), Query Frame = 0
Query:   14 STGCPNHVNWNITPNEARVNPTNTTIPAYPMFIEDGGTTT-------LAESPGSVGILLSGVAVFSSWAAAE--AAVSYETSAFFTEGSTFDACGGHATQV--GIYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLC----GQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDEA--------------FFPFVTNCYRGCCPAGMECSDHVEQCTGAESEAGYVEGDYTPVA 243
            S GCPNH  + ++P++  +     TIP YP F+     +T       L+++  S+GI  +G  +FS +A        +Y TSA + +GSTFD  G H+  +  G+Y     P CL +     +GS    HSPQ+GWA+DGFPIYG  GP GV+M+      G  G+D   C D+C GY      +D + YRYY+   +D+               ++P    C+RGCCP+G+ CS  V  C+G+ S  GY    +TP A
Sbjct:   46 SNGCPNHPWYQLSPSKPSLQKMTYTIPLYPQFLGSSTYSTSGYPAVDLSQTVDSIGIFFNGGMLFSPYAGPTYGQVKNYATSATYAKGSTFDQRGCHSNDLSNGLYGCSVPPHCLLNQLGQTSGS----HSPQIGWAHDGFPIYGPRGPNGVQMQTREVTGGTYGSDV--CTDVCGGYYLNDGTIDNYYYRYYIQGTYDDGTSCSNPGCTSPGGNYYPNTPVCFRGCCPSGVTCSSVVPACSGSYSN-GY--SAFTPAA 295          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: A0A7S2G312_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G312_9EUKA)

HSP 1 Score: 138 bits (347), Expect = 4.660e-35
Identity = 79/191 (41.36%), Postives = 107/191 (56.02%), Query Frame = 0
Query:   15 TGCPNHVNWNITPNEARVNPTNTTIPAYPMFIEDGGTTTLAESPGSVGILLSGVAVFSSWAAAEAAVSYETSAFFTEGSTFDACGGHA--TQVGIYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLC----GQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDEA 199
            +GCPNH   N+ PN A  +    TIP  P +      T+L+   G+VGI   G  ++S++A +     Y TSA + EG+TFD CGGH+  T    YH+H  P CL    +   G    EHSPQ+GW  DGFP+YG LGP G  M+ C    G +G D   CLD C GY A++   DG++YRYY+   F+ +
Sbjct:   41 SGCPNHPTKNLNPNYAVKSDQTFTIPVSPQY-SASQETSLSAVGGAVGIARDGTHIYSAFAGSYTLTGYSTSAAYLEGNTFDECGGHSSSTTTPSYHYHVVPSCL----LRQLGMASGEHSPQVGWMADGFPVYGPLGPNGAVMQTCTITGGTEGTDV--CLDDCGGYYADIG--DGYEYRYYIIGDFNAS 222          
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Match: A0A813E7E6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E7E6_POLGL)

HSP 1 Score: 140 bits (352), Expect = 3.100e-33
Identity = 95/264 (35.98%), Postives = 130/264 (49.24%), Query Frame = 0
Query:   14 STGCPNHVNWNITPNEARVNP----TNTTIPAYPMFIEDGGTTT---------LAESPGSVGILLSGVAVFSSWAAAEAAV--SYETSAFFTEGSTFDACGGHATQVGIYHF--HSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLGPGGVEMKLCGQQGAD--AVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDEA--------------FFPFVTNCYRGCCPAGMECSDHVEQC-TGAESEAGYVEGDYTPVA 243
            + GCPNH  + +   +  +N        T+P YP F+  G TT+         L+++   +GIL +G  +FS +A +E     +Y TSA +  GSTFD CG   T     HF  H  P CL +     +GS    HSPQ+GWA+DGFP+YG  GPGGV M+ C   G    A  C D C GY      +D + YRYY+   +D+               ++P    C+ GCCP+G+ C   V+ C TG  S  GY  G  TP A
Sbjct:   49 ANGCPNHPWYQLNDRKPYLNTWEGHVTYTMPLYPQFV--GSTTSPSSGSPAIDLSQTGSPIGILFNGGKLFSPYAGSETGQVKNYSTSATYLIGSTFDQCGCFTT----LHFGCHVPPHCLLNQLGQTSGS----HSPQIGWAFDGFPVYGPRGPGGVMMQTCSITGGTYGAAVCTDDCGGYYQNDGTIDEYYYRYYIQGTYDDGDSCSNPGCTSPGADYYPNTPVCFGGCCPSGVTCKSFVKACPTGGTSSKGY--GALTPTA 300          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUL4_ECTSI4.950e-10254.42YHYH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5KP42_9PHAE6.900e-10255.36YHYH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S1AW44_NOCSC6.050e-4138.89Hypothetical protein (Fragment) n=3 Tax=Noctiluca ... [more]
A0A7S1JAX6_9EUGL5.300e-3838.93Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A813JEL4_POLGL8.140e-3735.91Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
R1DZX8_EMIHU2.190e-3642.52EF-hand domain-containing protein n=2 Tax=Emiliani... [more]
D8LCJ6_ECTSI3.960e-3640.00YHYH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A813J4D8_POLGL5.750e-3635.52Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A7S2G312_9EUKA4.660e-3541.36Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A813E7E6_POLGL3.100e-3335.98Hypothetical protein n=1 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025924YHYH domainPFAMPF14240YHYHcoord: 38..149
e-value: 1.7E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR30289:SF8coord: 13..246
IPR005247YbhB/YbcLPANTHERPTHR30289UNCHARACTERIZED PROTEIN YBCL-RELATEDcoord: 13..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:122045..128323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.973.1mRNA_C-linearis_contig106.973.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 119553..129482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.973.1 ID=prot_C-linearis_contig106.973.1|Name=mRNA_C-linearis_contig106.973.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=366bp
MGSGDSMGRQVGTSTGCPNHVNWNITPNEARVNPTNTTIPAYPMFIEDGG
TTTLAESPGSVGILLSGVAVFSSWAAAEAAVSYETSAFFTEGSTFDACGG
HATQVGIYHFHSTPGCLQDHAMAVTGSTRLEHSPQLGWAYDGFPIYGQLG
PGGVEMKLCGQQGADAVHCLDLCSGYKAELPAVDGFKYRYYLSCGFDEAF
FPFVTNCYRGCCPAGMECSDHVEQCTGAESEAGYVEGDYTPVAGASLAEQ
YDVGFLPGVDTEYVDGDVLLECGAFVGSESEGYGAGNSSGTTPSPTEVGG
SSPAPSVAGTHVAGPVLATPSPESGPTGAEPDATGGAPSTGASSRLVLPL
AVAAATVVPGTLSRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025924YHYH_dom
IPR005247YbhB_YbcL