prot_C-linearis_contig105.957.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig105.957.1
Unique Name	prot_C-linearis_contig105.957.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	178

Homology

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BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 6.480e-100
Identity = 145/176 (82.39%), Postives = 154/176 (87.50%), Query Frame = 0

Query:    1 MLTNNLYQELGLVNGIRGEFVELVYAEGAPPPKPPLYVVVKFTGYSGGNWSEQERHRGCVPISPVDTTWQDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            ML+ NLYQ++GLVNGIRGE VELV A+ APPPK PLYVVVKF GYSGG WS QER+R CVPISPVDTTWQDGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE+RL ELA  T  KYT  GVF A
Sbjct:  110 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSA 285

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BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 1.510e-97
Identity = 145/176 (82.39%), Postives = 154/176 (87.50%), Query Frame = 0

Query:    1 MLTNNLYQELGLVNGIRGEFVELVYAEGAPPPKPPLYVVVKFTGYSGGNWSEQERHRGCVPISPVDTTWQDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            ML+ NLYQ++GLVNGIRGE VELV A+ APPPK PLYVVVKF GYSGG WS QER+R CVPISPVDTTWQDGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE+RL ELA  T  KYT  GVF A
Sbjct:  284 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSA 459

[Close]

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 2.630e-97
Identity = 145/176 (82.39%), Postives = 154/176 (87.50%), Query Frame = 0

Query:    1 MLTNNLYQELGLVNGIRGEFVELVYAEGAPPPKPPLYVVVKFTGYSGGNWSEQERHRGCVPISPVDTTWQDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            ML+ NLYQ++GLVNGIRGE VELV A+ APPPK PLYVVVKF GYSGG WS QER+R CVPISPVDTTWQDGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE+RL ELA  T  KYT  GVF A
Sbjct:    1 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSA 176

[Close]

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 3.250e-82
Identity = 132/154 (85.71%), Postives = 140/154 (90.91%), Query Frame = 0

Query:    1 MLTNNLYQELGLVNGIRGEFVELVYAEGAPPPKPPLYVVVKFTGYSGGNWSEQERHRGCVPISPVDTTWQDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEE 154
            ML+ NLYQ++GLVNGIRGE VELV A+ APPPK PLYVVVKF GYSGG WS QER+R CVPISPVDTTWQDGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE
Sbjct: 1415 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEE 1568

[Close]

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 2.460e-57
Identity = 91/108 (84.26%), Postives = 95/108 (87.96%), Query Frame = 0

Query:   69 WQDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            WQDGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDLI+EPMSFDRIGNLGN+ TMK RLQEE+RL ELA  T  +YT  GVFGA
Sbjct:    2 WQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLIVEPMSFDRIGNLGNSSTMKGRLQEEVRLGELARTTRVRYTDMGVFGA 109

[Close]

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 2.740e-56
Identity = 89/107 (83.18%), Postives = 94/107 (87.85%), Query Frame = 0

Query:   70 QDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            +DGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE+RL ELA  T  KYT  GVF A
Sbjct:    8 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSA 114

[Close]

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.990e-55
Identity = 89/107 (83.18%), Postives = 94/107 (87.85%), Query Frame = 0

Query:   70 QDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            +DGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE+RL ELA  T  KYT  GVF A
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSA 112

[Close]

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 2.910e-55
Identity = 89/107 (83.18%), Postives = 94/107 (87.85%), Query Frame = 0

Query:   70 QDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            +DGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE+RL ELA  T  KYT  GVF A
Sbjct:   72 KDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSA 178

[Close]

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 6.900e-54
Identity = 89/107 (83.18%), Postives = 94/107 (87.85%), Query Frame = 0

Query:   70 QDGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            +DGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE+RL ELA  T  KYT  GVF A
Sbjct:    6 EDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSA 112

[Close]

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 7.030e-51
Identity = 89/106 (83.96%), Postives = 93/106 (87.74%), Query Frame = 0

Query:   71 DGGAQVRTQLPLRLCWAITMHKSQGQTLLKAVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKARLQEEIRLWELASETSAKYTARGVFGA 176
            DGG QVRTQLPLRLCWAITMHKSQGQTL KAVI LGPKEACTGLTFVCLSRAKR VDL++EPMSFDRIGNLGN+ TMKARLQEE+RL ELA  T  KYT  GVF A
Sbjct:  350 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRLGELAQSTRVKYTDMGVFSA 455

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot

BLAST of mRNA_C-linearis_contig105.957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUS2_9PHAE	6.480e-100	82.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFG8_9PHAE	1.510e-97	82.39	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4U7_9PHAE	2.630e-97	82.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L976_9PHAE	3.250e-82	85.71	ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ...	[more]
A0A6H5K214_9PHAE	2.460e-57	84.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KSF1_9PHAE	2.740e-56	83.18	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCP5_9PHAE	1.990e-55	83.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMH2_9PHAE	2.910e-55	83.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN08_9PHAE	6.900e-54	83.18	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5J8Y8_9PHAE	7.030e-51	83.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23274	DNA HELICASE-RELATED	coord: 1..165
None	No IPR available	PANTHER	PTHR23274:SF32	ATP-DEPENDENT DNA HELICASE PIF1	coord: 1..165
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig105	contig	C-linearis_contig105:457922..458455 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig105.957.1	mRNA_C-linearis_contig105.957.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig105 457922..458455 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig105.957.1 ID=prot_C-linearis_contig105.957.1|Name=mRNA_C-linearis_contig105.957.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=178bp
MLTNNLYQELGLVNGIRGEFVELVYAEGAPPPKPPLYVVVKFTGYSGGNW
SEQERHRGCVPISPVDTTWQDGGAQVRTQLPLRLCWAITMHKSQGQTLLK
AVIGLGPKEACTGLTFVCLSRAKRTVDLIIEPMSFDRIGNLGNNLTMKAR
LQEEIRLWELASETSAKYTARGVFGAG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase