prot_C-linearis_contig105.946.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig105.946.1
Unique Nameprot_C-linearis_contig105.946.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length203
Homology
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 2.220e-77
Identity = 143/208 (68.75%), Postives = 169/208 (81.25%), Query Frame = 0
Query:    1 METKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRILAMQERQVSGGGSAGS----SSTAQHGIPGSLARDVAKHLKVEEYNSLFGVDHTAGVP---DKKP 201
            METKLKALVEKL+ IH KD +SKSLVFSQ+N SLEWLK  LPK+GF+FRTLTG MSR QRTA+L AFA DPPTTVFLLSVR+GAVGINLTQAN++FLLEPLLNLALEKQAIGRV+RLGQTRPVTV     TKL+L DS+ETRILA+Q++Q + G ++ +    SS++  G+ G++ARD AK LK+ EYN+LFGV   AG     D KP
Sbjct: 1097 METKLKALVEKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGNMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQTRPVTV-----TKLVLKDSIETRILALQKKQATEGSASAAVGAPSSSSSDGVAGNIARDNAKDLKIGEYNALFGVSEGAGDSFGGDSKP 1299          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 9.160e-77
Identity = 135/190 (71.05%), Postives = 162/190 (85.26%), Query Frame = 0
Query:    1 METKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRILAMQERQVSGGGSAGSSSTAQHGIPGSLARDVAKHLKVEEYNSLFGV 190
            METKLKALVE L+ IH KD +SKSLVFSQ+N SLEWLK  LPK+GF+FRTLTG MSR QRTA+L AFA DPPTTVFLLSVR+GAVGINLTQAN++FLLEPLLNLALEKQA+GRV+RLGQTRPVTV     TKL+L DS+ETRILA+Q++Q + G ++ +     +GI G++ARD AK+LK++EYN+LFGV
Sbjct: 1133 METKLKALVEMLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQTRPVTV-----TKLVLKDSIETRILALQKKQATEGSASAAVGAGSNGIAGNIARDNAKNLKIDEYNALFGV 1317          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: A0A835YWG4_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG4_9STRA)

HSP 1 Score: 197 bits (501), Expect = 8.950e-55
Identity = 109/191 (57.07%), Postives = 140/191 (73.30%), Query Frame = 0
Query:    1 METKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRILAMQERQVSGGGSAGSSSTAQHGIPGSLARDVAKHLKVEEYNSLFGVD 191
            ME+KLK LV  L+ I  KDA++K+LVFSQ+  +L +L+  LP+ GFEFRTLTG MSR+QRT +L+ F +DPPTT+FLLSVR+GA GINLT A+H+F+LEP LNLALE QAIGRVHRLGQTR V      V KL +  SVE+RI+AMQ  + S   + GS         GS+++D AK L++++YN LF VD
Sbjct: 1338 MESKLKVLVGMLAAIRGKDANAKALVFSQFTSTLRYLQRELPRHGFEFRTLTGDMSRRQRTKALEDFRSDPPTTIFLLSVRSGACGINLTAASHVFMLEPCLNLALEAQAIGRVHRLGQTRAV-----HVVKLYMEASVESRIIAMQTAK-SDRAAQGSDEDRPATAAGSISKDGAKELRIKDYNDLFAVD 1522          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: D7G0T7_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T7_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 4.080e-54
Identity = 113/192 (58.85%), Postives = 124/192 (64.58%), Query Frame = 0
Query:    1 METKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRILAMQERQVSGGGSAGSSS-TAQHGIPGSLARDVAKHLKVEEYNSLFGVD 191
            METKLKALVEKL+DI                                                  AFANDPPTTVFLLSVRAGAVGINLTQANH+FLLEP+LNLALEKQAIGRVHRLGQTRPVTV     TKL+LADSVETRILAM++ Q  GGGSAGSS   AQ G  GSLAR+ A+HLKV EY+  FG++
Sbjct:   85 METKLKALVEKLADIQA-----------------------------------------------NAFANDPPTTVFLLSVRAGAVGINLTQANHVFLLEPMLNLALEKQAIGRVHRLGQTRPVTV-----TKLVLADSVETRILAMRKMQARGGGSAGSSLFNAQGGPAGSLAREDARHLKVGEYDEFFGLN 224          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: A0A7S2CG02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG02_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.040e-51
Identity = 91/152 (59.87%), Postives = 115/152 (75.66%), Query Frame = 0
Query:    1 METKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRILAMQERQVS 152
            METKLKAL+ +L+ +  KDA+SK L+FSQ+  +L WL+  LP  G  FRTLTG+M++KQR  +L+ F  DPPTTVFLLSVRAGAVGINLTQANH+F+LEP+LN ALE QA+GRVHR+GQ R V V     TK ++ +SVE R+L +   Q S
Sbjct:    7 METKLKALMAELTKVRCKDATSKCLIFSQFQATLTWLQQMLPAHGCSFRTLTGKMTQKQRARALRDFQEDPPTTVFLLSVRAGAVGINLTQANHVFILEPILNPALELQAVGRVHRMGQQRHVYV-----TKFVMQNSVEERMLNLLNLQTS 153          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: A0A7S0GC86_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GC86_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.740e-46
Identity = 83/150 (55.33%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    3 TKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRILAMQERQVS 152
            +K   LV +L  I   + +SKSLVFSQ+  +L+W++  LPK+GF FRTL+G MS  +R  +L+ F +DPPTTVFLLS+R+GAVGINLTQAN +F++EP LN ALE QAIGRVHRLGQ RPV      V +L++ DS++TR++   ER+ S
Sbjct:   39 SKYLGLVTELEKIRDTEPNSKSLVFSQFTSTLKWMQEELPKRGFSFRTLSGDMSMPKRAQALREFQSDPPTTVFLLSMRSGAVGINLTQANRVFIMEPALNPALEAQAIGRVHRLGQNRPV-----EVIRLIIEDSIDTRLMKYLERKYS 183          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: A0A1E7F8K5_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F8K5_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.370e-44
Identity = 84/142 (59.15%), Postives = 108/142 (76.06%), Query Frame = 0
Query:    3 TKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRIL 144
            +K + L+++L  I   D SSKSLVFSQ+N +LE+L+  LPK GF+FRTL+G MS KQR  +L+ F NDPPTTVFLLS+RAGAVGINLTQAN +FL+EP  N ALE QAIGRVHRLGQ R V     ++ +L++ +S E R++
Sbjct:   68 SKFRFLLQELEIIRDNDVSSKSLVFSQFNSTLEYLQTELPKHGFQFRTLSGSMSMKQRAKALRDFQNDPPTTVFLLSMRAGAVGINLTQANRVFLMEPSFNPALEAQAIGRVHRLGQKREV-----NILRLVIKNSFEDRMM 204          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: A0A5J4Y535_9CHLO (SNF2 super family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y535_9CHLO)

HSP 1 Score: 159 bits (402), Expect = 6.600e-43
Identity = 93/190 (48.95%), Postives = 132/190 (69.47%), Query Frame = 0
Query:    2 ETKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRILAM-QERQV-----SGGGSAGSSSTAQHGIPGSLARDVAKHLKVEEYN 185
            ++KL+AL+ +L  +   D ++K+LVFSQ+  ++EWLK  L ++GF +RT++G MS +QR+ + +AF  DPPTTVFLLS+R+GAVGINLT AN++F+LEP LN  LE+QA+GR  R+GQ RPVTV+     KL +  SVE RI+ M Q RQ      SG  +AGSS+ A  G     A+D+A  +K ++ N
Sbjct:  289 DSKLQALLHQLHLMRQTDPTAKALVFSQFVGTIEWLKVKLEEQGFGYRTISGSMSLQQRSKAKEAFQKDPPTTVFLLSMRSGAVGINLTSANYVFVLEPALNPGLEEQAVGRAWRMGQQRPVTVK-----KLYVKGSVEERIMDMVQHRQTGSNSQSGASAAGSSAIATAGHTQVKAQDIAGSMKADKQN 473          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: A0A383VRJ5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VRJ5_TETOB)

HSP 1 Score: 162 bits (410), Expect = 1.190e-42
Identity = 83/143 (58.04%), Postives = 111/143 (77.62%), Query Frame = 0
Query:    2 ETKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRIL 144
            E+KL+AL+ +L+ +   D SSK+LVFSQYN +LEWL+  LPK+GF FRT+TG M+++ R  +++AF +DPPTTVFLLS+R+GAVGINLT A+H+FLLEP LN ALE+QAIGR  R+GQ R VTV+     +  +  SVE RI+
Sbjct:  588 ESKLQALIAELTAMRAADPSSKALVFSQYNSTLEWLQRRLPKEGFSFRTITGSMAQRARAKAIEAFQSDPPTTVFLLSMRSGAVGINLTAASHVFLLEPCLNPALEEQAIGRAWRMGQQRKVTVK-----RFYVKGSVEERIM 725          
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Match: A0A383VTQ3_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VTQ3_TETOB)

HSP 1 Score: 162 bits (410), Expect = 1.510e-42
Identity = 83/143 (58.04%), Postives = 111/143 (77.62%), Query Frame = 0
Query:    2 ETKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRTLTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEPLLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRIL 144
            E+KL+AL+ +L+ +   D SSK+LVFSQYN +LEWL+  LPK+GF FRT+TG M+++ R  +++AF +DPPTTVFLLS+R+GAVGINLT A+H+FLLEP LN ALE+QAIGR  R+GQ R VTV+     +  +  SVE RI+
Sbjct: 1508 ESKLQALIAELTAMRAADPSSKALVFSQYNSTLEWLQRRLPKEGFSFRTITGSMAQRARAKAIEAFQSDPPTTVFLLSMRSGAVGINLTAASHVFLLEPCLNPALEEQAIGRAWRMGQQRKVTVK-----RFYVKGSVEERIM 1645          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0S9_ECTSI2.220e-7768.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW09_9PHAE9.160e-7771.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YWG4_9STRA8.950e-5557.07SNF2 family N-terminal domain-containing protein n... [more]
D7G0T7_ECTSI4.080e-5458.85Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7S2CG02_9STRA3.040e-5159.87Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S0GC86_9STRA1.740e-4655.33Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1E7F8K5_9STRA3.370e-4459.15p-loop containing nucleoside triphosphate hydrolas... [more]
A0A5J4Y535_9CHLO6.600e-4348.95SNF2 super family n=1 Tax=Trebouxia sp. A1-2 TaxID... [more]
A0A383VRJ5_TETOB1.190e-4258.04Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A383VTQ3_TETOB1.510e-4258.04Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 35..118
e-value: 2.2E-19
score: 80.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 4..118
e-value: 8.6E-16
score: 58.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 4..152
score: 12.311
NoneNo IPR availableGENE3D3.40.50.300coord: 1..192
e-value: 7.5E-45
score: 155.3
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 2..150
NoneNo IPR availablePANTHERPTHR45626:SF17HELICASE-LIKE TRANSCRIPTION FACTORcoord: 2..150
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig105contigC-linearis_contig105:181716..184968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig105.946.1mRNA_C-linearis_contig105.946.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig105 179931..185651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig105.946.1 ID=prot_C-linearis_contig105.946.1|Name=mRNA_C-linearis_contig105.946.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=203bp
METKLKALVEKLSDIHTKDASSKSLVFSQYNCSLEWLKHALPKKGFEFRT
LTGQMSRKQRTASLQAFANDPPTTVFLLSVRAGAVGINLTQANHIFLLEP
LLNLALEKQAIGRVHRLGQTRPVTVRCSSVTKLLLADSVETRILAMQERQ
VSGGGSAGSSSTAQHGIPGSLARDVAKHLKVEEYNSLFGVDHTAGVPDKK
PS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase