prot_C-linearis_contig105.941.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig105.941.1
Unique Name	prot_C-linearis_contig105.941.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	93

Homology

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BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 5.620e-42
Identity = 65/92 (70.65%), Postives = 74/92 (80.43%), Query Frame = 0

Query:    2 KDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            +++L WW   G+  FP LAPVAQQVFGNQA AAQ+ERDFSGC NLLT NRSRMDTYWVEMVMFL ANFE IP +  IPMIA K++ +CLP R
Sbjct:   28 REILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPR 119

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BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.320e-38
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    2 KDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            ++VL WW   G+  FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL  N++ IPA+  IPMIA K++R+CLP R
Sbjct:  103 REVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPR 194

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BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 6.230e-38
Identity = 64/92 (69.57%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    2 KDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            ++VL WW   GKN FP LAPVAQQVFGNQA+ +Q+ERDFSG G LL  NRSRMDTYWVE+VMFL ANF  IP    IPM+A KN+RSCLP R
Sbjct:  190 REVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPAR 281

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BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 6.470e-36
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    2 KDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            ++VL WW   G+  FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL  N++ IPA+  IPMIA K++R+CLP R
Sbjct:  501 REVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPR 592

[Close]

BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.790e-34
Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = 0

Query:   16 FPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL  N++ IPA+  IPMIA K++R+CLP R
Sbjct:    2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPR 79

[Close]

BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.980e-30
Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 0

Query:    1 PKDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            P +VL +W T G++ FP L  VAQQ FG+Q SAA +ERDFSGCG  L  NRSR++ YWVEMVMFL ANF+ IP Y  IP I  K++R CLP +
Sbjct:  729 PTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAK 821

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BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 4.590e-30
Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 0

Query:    3 DVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            +VL +WG  GK+ FP+L  VAQQ FGNQASAA +ERDFSGCG  +  NRSR+D YWVEMVMFLKANF S      IP I PK++R CLP +
Sbjct:  389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRIN-IPQIDPKDIRKCLPAK 478

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BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 3.930e-29
Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 0

Query:    1 PKDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            P DVL +W   GK  FP+L  VAQQ FG+QASAAQIERDFS CG   T NRSR + YW+EMVM LK N+E IP Y  IP I  K++R CLP +
Sbjct:  489 PSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAK 581

[Close]

BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 6.040e-28
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 0

Query:    1 PKDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            P+DVL +W   G++ FP L  VAQQ FG+QA AAQIERDFS  G L  +NR+R+D YWVEMV+FLKANF+ IP Y  IP +  K++R CLP +
Sbjct:  384 PRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAK 476

[Close]

BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.020e-26
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0

Query:   16 FPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 93
            F  L   A +V GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL  N++ IPA+  IPMIA K++R+CLP R
Sbjct:  218 FQALYMTAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIRTCLPPR 295

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot

BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KSA7_9PHAE	5.620e-42	70.65	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JVT2_9PHAE	1.320e-38	67.39	Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ec...	[more]
A0A6H5JZQ5_9PHAE	6.230e-38	69.57	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KZ46_9PHAE	6.470e-36	67.39	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KP16_9PHAE	2.790e-34	73.08	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JJJ9_9PHAE	2.980e-30	59.14	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5K8W6_9PHAE	4.590e-30	62.64	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JB08_9PHAE	3.930e-29	60.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFQ8_9PHAE	6.040e-28	58.06	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KBM2_9PHAE	1.020e-26	65.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 3..68 e-value: 2.3E-10 score: 40.1
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig105	contig	C-linearis_contig105:142722..143000 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig105.941.1	mRNA_C-linearis_contig105.941.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig105 142722..143000 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig105.941.1 ID=prot_C-linearis_contig105.941.1|Name=mRNA_C-linearis_contig105.941.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=93bp
PKDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTAN
RSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf