prot_C-linearis_contig105.934.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig105.934.1
Unique Nameprot_C-linearis_contig105.934.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length597
Homology
BLAST of mRNA_C-linearis_contig105.934.1 vs. uniprot
Match: A0A6H5JEN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEN2_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 2.250e-81
Identity = 241/493 (48.88%), Postives = 292/493 (59.23%), Query Frame = 0
Query:    7 QQATKRPR-EKALDSYTPSTYMAYLEGTLLANGDLK-GSWRVRREDEAQNDFCMILVGRGLYDGAFNIQVPQPNASAPSVLDISDKWHSFEWVETTQPACNVWGRGQNTAFGEFFTIGVHDPTQRRIVIYKVCEKEMLRAQAFARIDNAAVAPVTAKPGPDHAAAAVPAPPTITAPAQXXXXXXXXXXXXXXXXXXXXXLTPRGGTRQRSRGFASSRPADFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTMSEEXXXXXPALGGCRTTSRPVAKMPKPSEDAPLPAPVPIPTEGPVVQMRPAFASITSTFSLPGFSGRFDDASTTSTTSGGGAHVAGASADELADLSILGARLQKEKLKIQEAARARRQPLLQEKGRFGLDLQKGEEDEAVMLRAIQELRKKMAEDGQRLESATRRLQVWRAALYMAEFFWGRK 497
            Q+AT  PR EK+L S+ P++YMA LEGTLL NGD+K GSWR RRED+   DF M+L+ +G+YDG FN+QVP    SAPSV ++ DKWHSFEWVETT   CNVWGRG+N  FGEF+TIGVHDP QRRIVIYKVCE EM RAQAFA+I    + P    P      AA P+ P + AP +        XXXXXXXXXXXXX       +++ R + +S P + AAA               XXXXXXXXXXXXX                 XXXXXXXXXXXXXX                          M+EE  XXX      R  + P  ++ K  E+   P PVPIP E     +R          +LPGFSGRF+DAST           A AS DELADLSILGARLQ+EK+KIQE ARA+RQP  ++K  +   +QKG  DEA+MLRA+QELRK+M ED ++LESAT+ ++ + A    A   W  K
Sbjct:    8 QRATAEPRKEKSLHSFIPTSYMALLEGTLLTNGDIKDGSWRPRREDDVSQDFLMVLMDKGVYDGGFNLQVPNTRPSAPSVQEVHDKWHSFEWVETTTSTCNVWGRGRNNQFGEFYTIGVHDPRQRRIVIYKVCEAEMRRAQAFAQIT---ITPAGCLP------AAAPSNPGLAAPKRTRLATAKAXXXXXXXXXXXXXX------QKQPRTYDAS-PREMAAAATLMYQQNLTVETGAXXXXXXXXXXXXXGCYPRVDAFCPSNDGDAXXXXXXXXXXXXXXVRSGL---------------------MNEEGSXXXXXXXXXRPLALPAPQVHK--ENPARPTPVPIPAE-----VR----------ALPGFSGRFEDASTMD--------FANASMDELADLSILGARLQREKVKIQEDARAQRQPFEEQKKEYQSKVQKGRADEAMMLRAVQELRKQMLEDERKLESATQCVKSYEAEEQHALMLWNEK 438          
BLAST of mRNA_C-linearis_contig105.934.1 vs. uniprot
Match: D7FMQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ5_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 8.590e-81
Identity = 207/471 (43.95%), Postives = 254/471 (53.93%), Query Frame = 0
Query:   27 MAYLEGTLLANGDLKGSWRVRREDEAQNDFCMILVGRGLYDGAFNIQVPQPNASAPSVLDISDKWHSFEWVETTQPACNVWGRGQNTAFGEFFTIGVHDPTQRRIVIYKVCEKEMLRAQAFARIDNAAVAPVTAKPGPDHAAAAVPAPPTITAPAQXXXXXXXXXXXXXXXXXXXXXLTPRGGTRQRSRGFASSRPADFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTMSEEXXXXXPALGGCRTTSRPVAKMPKPSEDAPLPAPVPIPTEGPVVQMRPAFASITSTFSLPGFSGRFDDASTTSTTSGGGAHVAGASADELADLSILGARLQKEKLKIQEAARARRQPLLQEKGRFGLDLQKGEEDEAVMLRAIQELRKKMAEDGQRLESATRRLQVWRAALYMAEFFWGRK 497
            MA LEGTLL NGD+KGSWR RREDE   DF M+L+ +G+YDG FN+Q+P    SAPSV ++ DKWHSFEWVETT+ +CNVWGRG N  FGEF+TIGVHDP QRRIVIYKVCE EM RAQAFA++   +   + A         A P+ P + AP +                         GG ++R R + +S P + AAA                XXXXXXXXXXXX                   X                                         XXXXXPALGG R  + P  ++ K  E+   P PVPIP E     +R          +LPGFSGRF+DAST           A AS DELADLSILGARLQ+EK+KIQE ARA+RQP  ++K  +   +QKG  DEA+MLRA+QELRK+M ED ++LESAT+ ++ + A    A   W  K
Sbjct:    1 MALLEGTLLTNGDIKGSWRARREDEVSQDFLMVLMDKGVYDGGFNLQLPNTRPSAPSVQEVHDKWHSFEWVETTKSSCNVWGRGLNNQFGEFYTIGVHDPRQRRIVIYKVCEAEMRRAQAFAQMTITSAGRLPA---------AAPSDPGLAAPKRTRSATAKAAAV----------AATAGGRQKRPRAYDAS-PREMAAAATLLYQQNLTVETGACXXXXXXXXXXXXGCYPRVDAFCPSYDGDAGGX-------------------------------------XXXXXXXXXPALGGGRPLAFPAPQVHK--ENPARPTPVPIPAE-----VR----------ALPGFSGRFEDASTVD--------FANASMDELADLSILGARLQREKVKIQEDARAQRQPFEEQKKEYQSKVQKGRADEAMMLRAVQELRKQMLEDERKLESATQCVKSYEAEEQHALMLWNEK 389          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEN2_9PHAE2.250e-8148.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMQ5_ECTSI8.590e-8143.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 459..479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig105contigC-linearis_contig105:84612..95013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig105.934.1mRNA_C-linearis_contig105.934.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig105 83741..97088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig105.934.1 ID=prot_C-linearis_contig105.934.1|Name=mRNA_C-linearis_contig105.934.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=597bp
MKQQQQQQATKRPREKALDSYTPSTYMAYLEGTLLANGDLKGSWRVRRED
EAQNDFCMILVGRGLYDGAFNIQVPQPNASAPSVLDISDKWHSFEWVETT
QPACNVWGRGQNTAFGEFFTIGVHDPTQRRIVIYKVCEKEMLRAQAFARI
DNAAVAPVTAKPGPDHAAAAVPAPPTITAPAQAAVPAAAVATRATAEAPP
AAVLTPRGGTRQRSRGFASSRPADFAAAGGIVAAAHASSRSDIVTAAALL
IQAATGGGGGGGGGGSGSGSGGGSRRGGGCCQHAGARSPGSSDGDACGGG
GGGGGGGSGGSDTMSEEGSGGGPALGGCRTTSRPVAKMPKPSEDAPLPAP
VPIPTEGPVVQMRPAFASITSTFSLPGFSGRFDDASTTSTTSGGGAHVAG
ASADELADLSILGARLQKEKLKIQEAARARRQPLLQEKGRFGLDLQKGEE
DEAVMLRAIQELRKKMAEDGQRLESATRRLQVWRAALYMAEFFWGRKAHR
SFFFFPFLNKRGTQETTECCCIGPFAFGKQCAPERPLKASTASPPPLFSL
PFQRPIASCTFWCRAIRRLCSIQTTVPLAAVPKTANPPGQYVLRVP*
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