prot_C-linearis_contig105.929.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig105.929.1
Unique Nameprot_C-linearis_contig105.929.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length419
Homology
BLAST of mRNA_C-linearis_contig105.929.1 vs. uniprot
Match: D7FXV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV3_ECTSI)

HSP 1 Score: 513 bits (1322), Expect = 2.840e-180
Identity = 245/289 (84.78%), Postives = 265/289 (91.70%), Query Frame = 0
Query:    1 MCDSCDAYRHESGGNKTIEYADHIRAKVTWTKPLLLGKEELRPFLTKDEAAFKIQQLHRNWRARETTRDAMRVAWNRVYSPQERRFFFFYKGKSPLILPTTASWVQPCRSIGGIWVWRPVLSDHVAAMRIQNMWRNFMGRRGLRQLVRQMYALEHDPITGTERYRNLQTGEVSVEKPLSLSSERWDQDDMMLWTVDEVVLFIRRCGLKRLTPRLRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFNGYNKRAKDLLRRAALRQRHFEETQVEIIQRWW 289
            MCDSCDAYRH+SGGNKTIEY DH RAKVTW+KP LLGKEELRPFLT +EAAFK+QQLHRNW+ARE  RDAMRVAWNRVYSPQERRFFFFYKG+SPL+LPTTASW QPCRSIGGIWVWRPVLS+HVAAMRIQN+WRNF GRR LR+ VRQMY++EHDPITG E YRNL+TGEVS  KPLSL SERWDQDDMMLWTV+EVV+FIRRCGLKR  P++RHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAF+GYNKRAKDLLRRAALRQRH E TQ   ++  W
Sbjct:    1 MCDSCDAYRHQSGGNKTIEYTDHERAKVTWSKPRLLGKEELRPFLTVNEAAFKMQQLHRNWKAREIARDAMRVAWNRVYSPQERRFFFFYKGESPLVLPTTASWTQPCRSIGGIWVWRPVLSEHVAAMRIQNLWRNFAGRRDLRERVRQMYSMEHDPITGAECYRNLKTGEVSDRKPLSLGSERWDQDDMMLWTVEEVVMFIRRCGLKRFAPKIRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFSGYNKRAKDLLRRAALRQRHLEGTQYTQVRLTW 289          
BLAST of mRNA_C-linearis_contig105.929.1 vs. uniprot
Match: A0A835YL39_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL39_9STRA)

HSP 1 Score: 323 bits (827), Expect = 3.670e-101
Identity = 151/282 (53.55%), Postives = 197/282 (69.86%), Query Frame = 0
Query:    9 RHESGGNKTIEYADHIRAKVTWTKPLLLGKEELRPFLTKDEAAFKIQQLHRNWRARETTRDAMRVAWNRVYSPQERRFFFFYKGKSPLILPTTASWVQPCRSIGGIWVWRPVLSDHVAAMRIQNMWRNFMGRRGLRQLVRQMYALEHDPITGTERYRNLQTGEVSVEKPLSLSSERWDQDDMMLWTVDEVVLFIRRCGLKRLTPRLRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFNGYNKRAKDLLRRAALRQRHFEETQVEIIQRWWR 290
            R+ S   +   Y      +V+W KP +LG EELRPFLT+DEAAFK+QQLHRNWRARE  R+ +R  W+R+YSP E+RF++ YKG SPL+LP  A W QPCR +G  W+WRP+L++ +AA+R+Q  WR   GRR +R +VR++Y+L+ DPITG   YRN  TGEV   KP+ L SE WD  DMM W VD+ ++FIRRCGLK      R + VDGALL+T DP D  LLG  + ++ K++LL IERRP F GYN R +D+LRR ALRQ   ++    ++QRWWR
Sbjct:  108 RYYSSQRRRHYYCFTRTGRVSWHKPRVLGSEELRPFLTRDEAAFKMQQLHRNWRARERARNLLRRYWDRIYSPAEKRFYYHYKGDSPLVLPQRARWSQPCRMMGREWIWRPLLTESMAALRVQTFWRAASGRREIRDIVRRVYSLQSDPITGRPAYRNNITGEVQATKPVLLGSELWDPVDMMQWGVDQTIIFIRRCGLKPYARAFRRYGVDGALLLTLDPSDLALLGMDNPIHVKRVLLGIERRPGFQGYNTRPEDMLRRTALRQACRQDAAAAVLQRWWR 389          
BLAST of mRNA_C-linearis_contig105.929.1 vs. uniprot
Match: A0A7S4E5F1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5F1_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.220e-50
Identity = 129/393 (32.82%), Postives = 202/393 (51.40%), Query Frame = 0
Query:   16 KTIEYADHIRAKVTWTKPLLLGKEELRPFLTKDEAAFKIQQLHRNWRARETTRDAMRVAWNRVYSPQERRFFFFYKGKSPLILPTTASWVQPCRSIGGIWVWRPVL---SDHVAAMRIQNMWRNFMGRRGLRQLVRQMYALEHDPITGTERYRNLQTGEVSVEKPLSLSSERWDQDDMMLWTVDEVVLFIRRCGLKRLTPRLRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFNGYNKRAKDLLRRAALRQRHFEETQVEIIQRWWRAMMRETLRRLWKQTFTTAKAQEERERKRIDSAIWWTDKVRDYSGLDASVKLFGRRGNILGARGWGRWDPRGERWTPAPEEVGTPHRSRLMYRDAPDSAAVPIHNVEEMLFKEDQA 405
            KT  Y      + +W KPL L + EL P+ + D+  F+IQ L R+  AR    + +R  +++++S +  RF++ + GKS L+ P  A W +P         WR +    S+ VAA+ IQN W  +  R+ +   VR  Y ++ DP+TG   Y N+ T +   +KP  L SE  D +DM LW +  + +F RR G   + P LR F+VDGALL++F+ +D++ LG   S   K++LL IE+R  F  +      L+RR  LR  H  E     IQR +R +     R    +     KA+++ E+ R +  +WW+ K+++    D   K++G R  +    GWG W   GE+W P  ++   PH+ R  Y+  P +  V       + FK D A
Sbjct:  136 KTYFYFRPSIQETSWRKPLCLKEAELCPYPSFDDYVFRIQGLARHKAARNYLIELIRQTYDKIFSREYTRFYYHFNGKSTLV-PRVA-WTKP-----RFLYWRDLKAFKSEDVAALMIQNQWHAYKARQFMMNAVRAQYTVKTDPLTGRLMYTNVHTHKRGFKKPPLLGSEELDPEDMSLWGIYRLGVFFRRLGYGFIAPELRRFDVDGALLLSFEWQDYVDLGFTQSHVIKRVLLQIEKRAFFKSHRDLPVTLVRRDRLRYHHRVEKAAISIQRRYRVIYAALQRARAAERERVEKAKKKAEKDRKEGGLWWSGKIKNLPVPDHG-KVYGNR-TVETVHGWGSWI--GEKWVPLDDKT-RPHKQR--YKHNPLN--VRFKFARTLHFKNDDA 512          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXV3_ECTSI2.840e-18084.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YL39_9STRA3.670e-10153.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4E5F1_9STRA6.220e-5032.82Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 178..255
e-value: 7.6E-8
score: 34.7
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 184..252
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 123..152
score: 7.821
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 47..76
score: 7.035

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig105contigC-linearis_contig105:49588..55434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig105.929.1mRNA_C-linearis_contig105.929.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig105 49588..55434 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig105.929.1 ID=prot_C-linearis_contig105.929.1|Name=mRNA_C-linearis_contig105.929.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=419bp
MCDSCDAYRHESGGNKTIEYADHIRAKVTWTKPLLLGKEELRPFLTKDEA
AFKIQQLHRNWRARETTRDAMRVAWNRVYSPQERRFFFFYKGKSPLILPT
TASWVQPCRSIGGIWVWRPVLSDHVAAMRIQNMWRNFMGRRGLRQLVRQM
YALEHDPITGTERYRNLQTGEVSVEKPLSLSSERWDQDDMMLWTVDEVVL
FIRRCGLKRLTPRLRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNI
ERRPAFNGYNKRAKDLLRRAALRQRHFEETQVEIIQRWWRAMMRETLRRL
WKQTFTTAKAQEERERKRIDSAIWWTDKVRDYSGLDASVKLFGRRGNILG
ARGWGRWDPRGERWTPAPEEVGTPHRSRLMYRDAPDSAAVPIHNVEEMLF
KEDQARRRADRTRATTGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR000048IQ_motif_EF-hand-BS