Homology
BLAST of mRNA_C-linearis_contig104.915.1 vs. uniprot
Match:
A0A6H5KAX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAX4_9PHAE)
HSP 1 Score: 369 bits (946), Expect = 4.540e-127
Identity = 183/232 (78.88%), Postives = 209/232 (90.09%), Query Frame = 0
Query: 11 LWLTKTCSFVTLPGIASRQR-TAALSTGSGMPMPPSPEELKARAAAIREELKELEASASVNRRPNAELAEPKRVVPFPETLLDSCWKVVLELRGVKSDKNRIPVRLVFCCKFAADDFILEVEGDHRFVKRGYVWEPDRNEEDDKEFITFIAQVEGLSAVPDGRIYMNAYIDTTKGDDGKTRYKFSDGAVTIKEVINKSFWGIFNTAGLLAEFKVVGTWDAFPIDALPDTPSS 241
LWLT T SF+ +P IA+R+R T L +G +PPSPE L+ARAAAIREELKELEA+A+ RRPNAELAEPKRVVPFPETLLDSCWK+V++LRGVKSDKNR+PVRLVFCCKFA +DFILEVE D+RFVKRGYVWEPDRN+++DKEFITFIA+VEGLSAVPDGRI+MN +ID +GDDGKTRYKFS+GAVTIKEVI+KSFWG+FNTAGLLAEFKVVGTWDA PIDALP+ SS
Sbjct: 11 LWLTPTHSFMAVPPIAARKRVTTQLHSGEDGRIPPSPETLRARAAAIREELKELEANAAATRRPNAELAEPKRVVPFPETLLDSCWKIVMDLRGVKSDKNRVPVRLVFCCKFAEEDFILEVESDNRFVKRGYVWEPDRNDDEDKEFITFIAEVEGLSAVPDGRIFMNGFIDKIEGDDGKTRYKFSEGAVTIKEVIDKSFWGVFNTAGLLAEFKVVGTWDASPIDALPEKQSS 242
BLAST of mRNA_C-linearis_contig104.915.1 vs. uniprot
Match:
A0A836CMB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB8_9STRA)
HSP 1 Score: 105 bits (263), Expect = 1.200e-24
Identity = 56/117 (47.86%), Postives = 79/117 (67.52%), Query Frame = 0
Query: 120 KFAADDFILEVEGDHRFVKRGYVWEPDRNEEDDKEFITFIAQVEGLSAVPDGRIYMNAYIDTTKGDDGKTRYKFSDGAVTIKEVINKSFWGIFNTAGLLAEFKVVGTWDAFPIDALP 236
+F++DD IL V + RGY+W PDR+ ++ +I F V+GLSAVPDG++Y+NA +D DD YK SDG +TIKEV N+ +G+F+ AG+LAEFKVVG + A P+ +P
Sbjct: 71 RFSSDDNILLVSAGTPAITRGYIWAPDRDA--NRTYIAFDIGVKGLSAVPDGKLYLNARVDQ---DDATGGYKLSDGVLTIKEVDNRRGFGLFSFAGILAEFKVVGEFVATPLREMP 182
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.915.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M R V A W V A W S T L W L T K T C S F V T L P G I A S R Q R T A A L S T G S G M P M P P S P E E L K A R A A A I R E E L K E L E A S A S V N R R P N A E L A E P K R V V P F P E T L L D S C W K V V L E L R G V K S D K N R I P V R L V F C C K F A A D D F I L E V E G D H R F V K R G Y V W E P D R N E E D D K E F I T F I A Q V E G L S A V P D G R I Y M N A Y I D T T K G D D G K T R Y K F S D G A V T I K E V I N K S F W G I F N T A G L L A E F K V V G T W D A F P I D A L P D T P S S N T P S S E * 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 4.54e-127 / Id = 78.88 Expect = 1.20e-24 / Id = 47.86 Sequence A0A6H5KAX4_9PHAE A0A836CMB8_9STRA back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M R V A W V A W S T L W L T K T C S F V T L P G I A S R Q R T A A L S T G S G M P M P P S P E E L K A R A A A I R E E L K E L E A S A S V N R R P N A E L A E P K R V V P F P E T L L D S C W K V V L E L R G V K S D K N R I P V R L V F C C K F A A D D F I L E V E G D H R F V K R G Y V W E P D R N E E D D K E F I T F I A Q V E G L S A V P D G R I Y M N A Y I D T T K G D D G K T R Y K F S D G A V T I K E V I N K S F W G I F N T A G L L A E F K V V G T W D A F P I D A L P D T P S S N T P S S E * 20 40 60 80 100 120 140 160 180 200 220 240 Score = Score = Score = Score = Score = Score = Score = 0.731 Sequence Coil SIGNAL_PEPTIDE_H_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 46..66 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 3..13 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 19..247 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..18 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 14..18 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..2 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..18
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig104.915.1 ID=prot_C-linearis_contig104.915.1|Name=mRNA_C-linearis_contig104.915.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=248bp back to top