Homology
BLAST of mRNA_C-linearis_contig104.914.1 vs. uniprot
Match:
A0A6H5K800_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K800_9PHAE)
HSP 1 Score: 307 bits (786), Expect = 1.160e-103
Identity = 154/203 (75.86%), Postives = 177/203 (87.19%), Query Frame = 0
Query: 19 LRHSGRQRAA--LSFHRNGGTTPVVESDEDLQPNWSGLERRLKSRVPRERGRGVPEGRTNLKPSEEDFWHEAGVYDYSSSSDASTRAPPKVSTREPSCARLSTIKVGTDNIPRVVSLYKTSVAPVLQVKGFCGAQLFSDRAAGTVQSLTMWESWADLETAVGDKRYAKVMRSLEGLIEAPPDVIDTEVACSILPTTGGGDVSS 219
LR+ GR+ A LS+H GGT+ E DE+L PNWSGLERRL+SRVPRE+G GVPEGRTNLKPSEEDFWH+AGVYDYS +S +S P+++TREP+CARLST+KV +N+PRVV+LYKTSVAPVLQVKGFCGAQ+FSDRAAGTVQSLT+W+SW DLE VG+ RYAK MRSLEGLIEAPPDV+DTEVACSILPTTGGGDVSS
Sbjct: 7 LRYCGRRSATRRLSYHHKGGTS--CEPDEELHPNWSGLERRLQSRVPREKGHGVPEGRTNLKPSEEDFWHKAGVYDYSEASSSS----PEIATREPACARLSTVKVSAENVPRVVALYKTSVAPVLQVKGFCGAQVFSDRAAGTVQSLTLWQSWGDLEEVVGNSRYAKAMRSLEGLIEAPPDVVDTEVACSILPTTGGGDVSS 203
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.914.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M A S F L Q R T A S Q G Y R G G S F L R H S G R Q R A A L S F H R N G G T T P V V E S D E D L Q P N W S G L E R R L K S R V P R E R G R G V P E G R T N L K P S E E D F W H E A G V Y D Y S S S S D A S T R A P P K V S T R E P S C A R L S T I K V G T D N I P R V V S L Y K T S V A P V L Q V K G F C G A Q L F S D R A A G T V Q S L T M W E S W A D L E T A V G D K R Y A K V M R S L E G L I E A P P D V I D T E V A C S I L P T T G G G D V S S D E P E E V A * 20 40 60 80 100 120 140 160 180 200 220 Expect = 1.16e-103 / Id = 75.86 Sequence A0A6H5K800_9PHAE
Match Name E-value Identity Description
A0A6H5K800_9PHAE 1.160e-103 75.86 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M A S F L Q R T A S Q G Y R G G S F L R H S G R Q R A A L S F H R N G G T T P V V E S D E D L Q P N W S G L E R R L K S R V P R E R G R G V P E G R T N L K P S E E D F W H E A G V Y D Y S S S S D A S T R A P P K V S T R E P S C A R L S T I K V G T D N I P R V V S L Y K T S V A P V L Q V K G F C G A Q L F S D R A A G T V Q S L T M W E S W A D L E T A V G D K R Y A K V M R S L E G L I E A P P D V I D T E V A C S I L P T T G G G D V S S D E P E E V A * 20 40 60 80 100 120 140 160 180 200 220 Expect = 3.0E-5 / Score = 26.1 Score = Sequence G3DSA:3.30.70.100 SSF54909
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 3.30.70.100 coord: 117..207 IPR011008 Dimeric alpha-beta barrel SUPERFAMILY 54909 Dimeric alpha+beta barrel coord: 115..207
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig104.914.1 ID=prot_C-linearis_contig104.914.1|Name=mRNA_C-linearis_contig104.914.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=227bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR011008 Dimeric_a/b-barrel